RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-208	ENST00000559686	CC2D1B	Q5T0F9	858 aa	Known RBP	12.03	□□□□□ -0.48
SNRPA1-208	ENST00000559686	C3orf67	Q6ZVT6	689 aa		12.03	□□□□□ -0.48
SNRPA1-208	ENST00000559686	CTU1	Q7Z7A3	348 aa	Known RBP	12.03	□□□□□ -0.48
SNRPA1-208	ENST00000559686	TMX4	Q9H1E5	349 aa	Predicted RBP	12.03	□□□□□ -0.48
SNRPA1-208	ENST00000559686	ZNRF3	Q9ULT6	936 aa		12.03	□□□□□ -0.48
SNRPA1-208	ENST00000559686	ADM5	C9JUS6	153 aa		12.02	□□□□□ -0.49
SNRPA1-208	ENST00000559686	PGAP2	Q9UHJ9	254 aa		12.02	□□□□□ -0.49
SNRPA1-208	ENST00000559686	CNOT7	Q9UIV1	285 aa	Known RBP	12.02	□□□□□ -0.49
SNRPA1-208	ENST00000559686	HPS5	Q9UPZ3	1129 aa		12.02	□□□□□ -0.49
SNRPA1-208	ENST00000559686	CEMIP	Q8WUJ3	1361 aa		12.02	□□□□□ -0.49
SNRPA1-208	ENST00000559686		H7C1D1	291 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	HOXA10	P31260	410 aa	Predicted RBP	12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	RBM26	Q5T8P6	1007 aa	Known RBP	12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	SUSD4	Q5VX71	490 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	MCM10	Q7L590	875 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	SAMD7	Q7Z3H4	446 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	MICALL2	Q8IY33	904 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	C2orf69	Q8N8R5	385 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	PHACTR3	Q96KR7	559 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	CRAMP1	Q96RY5	1269 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	ZBTB3	Q9H5J0	574 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	GBA2	Q9HCG7	927 aa	Predicted RBP	12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	SAGE1	Q9NXZ1	904 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	RRP7A	Q9Y3A4	280 aa	Known RBP	12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	RIC1	Q4ADV7	1423 aa		12.01	□□□□□ -0.49
SNRPA1-208	ENST00000559686	LAMB4	A4D0S4	1761 aa		12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	POLR2A	P24928	1970 aa	Known RBP	12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	SPDYE4	A6NLX3	237 aa		12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	EIF4G2	P78344	907 aa	Known RBP eCLIP	12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	DCTN1	Q14203	1278 aa		12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	GRIPAP1	Q4V328	841 aa		12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	DPP8	Q6V1X1	898 aa	Predicted RBP	12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	TTLL7	Q6ZT98	887 aa		12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	KRT26	Q7Z3Y9	468 aa		12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	ZC3H15	Q8WU90	426 aa	Known RBP	12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	MIS18A	Q9NYP9	233 aa		12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	ATP6V0A2	Q9Y487	856 aa		12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	UBN2	Q6ZU65	1347 aa		12	□□□□□ -0.49
SNRPA1-208	ENST00000559686	EGFR	P00533	1210 aa		11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	MYL6B	P14649	208 aa		11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	PRKAR2B	P31323	418 aa		11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	TNIP1	Q15025	636 aa		11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	KIF6	Q6ZMV9	814 aa		11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	SUPT20H	Q8NEM7	779 aa		11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	CCDC102A	Q96A19	550 aa		11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	CSRNP1	Q96S65	589 aa		11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	HDAC9	Q9UKV0	1011 aa		11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	COL3A1	P02461	1466 aa	Predicted RBP	11.99	□□□□□ -0.49
SNRPA1-208	ENST00000559686	LAMB2	P55268	1798 aa		11.98	□□□□□ -0.49
SNRPA1-208	ENST00000559686	ABCC4	O15439	1325 aa		11.98	□□□□□ -0.49
SNRPA1-208	ENST00000559686	KIF7	Q2M1P5	1343 aa		11.98	□□□□□ -0.49
SNRPA1-208	ENST00000559686	MAP3K15	Q6ZN16	1313 aa		11.98	□□□□□ -0.49
SNRPA1-208	ENST00000559686	YDJC	A8MPS7	323 aa		11.98	□□□□□ -0.49
SNRPA1-208	ENST00000559686	HABP4	Q5JVS0	413 aa	Known RBP	11.98	□□□□□ -0.49
SNRPA1-208	ENST00000559686	RTF1	Q92541	710 aa	Known RBP	11.98	□□□□□ -0.49
SNRPA1-208	ENST00000559686	TAF1	P21675	1872 aa		11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	CDHR2	Q9BYE9	1310 aa		11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	NTSR2	O95665	410 aa		11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	TBC1D8	O95759	1140 aa		11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	SLC10A3	P09131	477 aa		11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	MPND	Q8N594	471 aa		11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	ZNF428	Q96B54	188 aa		11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	DCPS	Q96C86	337 aa	Known RBP	11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	GCC1	Q96CN9	775 aa		11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	NLRP3	Q96P20	1036 aa		11.97	□□□□□ -0.49
SNRPA1-208	ENST00000559686	RIMBP2	O15034	1052 aa		11.96	□□□□□ -0.49
SNRPA1-208	ENST00000559686	RGL2	O15211	777 aa		11.96	□□□□□ -0.49
SNRPA1-208	ENST00000559686	CD44	P16070	742 aa	Known RBP	11.96	□□□□□ -0.49
SNRPA1-208	ENST00000559686	KIAA2012	Q0VF49	1180 aa		11.96	□□□□□ -0.49
SNRPA1-208	ENST00000559686	VPS33B	Q9H267	617 aa		11.96	□□□□□ -0.49
SNRPA1-208	ENST00000559686	DBNDD1	Q9H9R9	158 aa		11.96	□□□□□ -0.49
SNRPA1-208	ENST00000559686	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.96	□□□□□ -0.49
SNRPA1-208	ENST00000559686	MKI67	P46013	3256 aa	Known RBP	11.96	□□□□□ -0.5
SNRPA1-208	ENST00000559686	ASTN2	O75129	1339 aa	Predicted RBP	11.95	□□□□□ -0.5
SNRPA1-208	ENST00000559686	ERVV-1	B6SEH8	477 aa		11.95	□□□□□ -0.5
SNRPA1-208	ENST00000559686	PSMD14	O00487	310 aa		11.95	□□□□□ -0.5
SNRPA1-208	ENST00000559686	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.95	□□□□□ -0.5
SNRPA1-208	ENST00000559686	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.95	□□□□□ -0.5
SNRPA1-208	ENST00000559686	PPP1R42	Q7Z4L9	355 aa		11.94	□□□□□ -0.5
SNRPA1-208	ENST00000559686	RASAL3	Q86YV0	1011 aa		11.94	□□□□□ -0.5
SNRPA1-208	ENST00000559686	RSPH6A	Q9H0K4	717 aa		11.94	□□□□□ -0.5
SNRPA1-208	ENST00000559686	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	DUOX1	Q9NRD9	1551 aa		11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	HCLS1	P14317	486 aa	Predicted RBP	11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	MKRN3	Q13064	507 aa	Known RBP	11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	SULF1	Q8IWU6	871 aa		11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	SP8	Q8IXZ3	490 aa		11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	ZNF34	Q8IZ26	560 aa		11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	CDCA5	Q96FF9	252 aa		11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	THUMPD2	Q9BTF0	503 aa	Known RBP	11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	KCNQ5	Q9NR82	932 aa		11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	GGA3	Q9NZ52	723 aa		11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	SCAF8	Q9UPN6	1271 aa	Known RBP	11.93	□□□□□ -0.5
SNRPA1-208	ENST00000559686	PKN2	Q16513	984 aa	Known RBP	11.92	□□□□□ -0.5
SNRPA1-208	ENST00000559686	DOK7	Q18PE1	504 aa		11.92	□□□□□ -0.5
SNRPA1-208	ENST00000559686	MOB2	Q70IA6	237 aa		11.92	□□□□□ -0.5
SNRPA1-208	ENST00000559686	UTP14A	Q9BVJ6	771 aa	Known RBP	11.92	□□□□□ -0.5
SNRPA1-208	ENST00000559686	BBOX1	O75936	387 aa		11.91	□□□□□ -0.5
SNRPA1-208	ENST00000559686	TAF7	Q15545	349 aa	Predicted RBP	11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms