RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ZNRF3Q9ULT6 936 aa19.35■□□□□ 0.69
LRRC28-213ENST00000559399 CNTNAP1P78357 1384 aa19.34■□□□□ 0.69
LRRC28-213ENST00000559399 COL13A1Q5TAT6 717 aaPredicted RBP19.34■□□□□ 0.69
LRRC28-213ENST00000559399 EPS15P42566 896 aa19.33■□□□□ 0.68
LRRC28-213ENST00000559399 KIAA2012Q0VF49 1180 aa19.33■□□□□ 0.68
LRRC28-213ENST00000559399 TRIM28Q13263 835 aaKnown RBP19.33■□□□□ 0.68
LRRC28-213ENST00000559399 SF3B3Q15393 1217 aaKnown RBP19.33■□□□□ 0.68
LRRC28-213ENST00000559399 RIC3Q7Z5B4 369 aa19.33■□□□□ 0.68
LRRC28-213ENST00000559399 ANKRD36CQ5JPF3 1778 aa19.32■□□□□ 0.68
LRRC28-213ENST00000559399 ADAMTSL1Q8N6G6 1762 aa19.32■□□□□ 0.68
LRRC28-213ENST00000559399 ELL2O00472 640 aaPredicted RBP19.32■□□□□ 0.68
LRRC28-213ENST00000559399 IRS4O14654 1257 aaPredicted RBP19.31■□□□□ 0.68
LRRC28-213ENST00000559399 CXCL9Q07325 125 aa19.31■□□□□ 0.68
LRRC28-213ENST00000559399 RTL5Q5HYW3 569 aaPredicted RBP19.31■□□□□ 0.68
LRRC28-213ENST00000559399 USP50Q70EL3 339 aaPredicted RBP19.31■□□□□ 0.68
LRRC28-213ENST00000559399 C8orf58Q8NAV2 365 aa19.31■□□□□ 0.68
LRRC28-213ENST00000559399 CHMP4AQ9BY43 222 aa19.31■□□□□ 0.68
LRRC28-213ENST00000559399 CELF1Q92879 486 aaKnown RBP19.3■□□□□ 0.68
LRRC28-213ENST00000559399 PHAXQ9H814 394 aaKnown RBP19.3■□□□□ 0.68
LRRC28-213ENST00000559399 GPRC5DQ9NZD1 345 aa19.3■□□□□ 0.68
LRRC28-213ENST00000559399 PCNTO95613 3336 aa19.3■□□□□ 0.68
LRRC28-213ENST00000559399 HSP90B1P14625 803 aaKnown RBP19.29■□□□□ 0.68
LRRC28-213ENST00000559399 CIAPIN1Q6FI81 312 aa19.29■□□□□ 0.68
LRRC28-213ENST00000559399 ZBTB38Q8NAP3 1195 aaPredicted RBP19.29■□□□□ 0.68
LRRC28-213ENST00000559399 ADARB2Q9NS39 739 aaKnown RBP19.29■□□□□ 0.68
LRRC28-213ENST00000559399 LTBP1Q14766 1721 aa19.28■□□□□ 0.68
LRRC28-213ENST00000559399 CDHR2Q9BYE9 1310 aa19.28■□□□□ 0.68
LRRC28-213ENST00000559399 RAD17O75943 681 aa19.28■□□□□ 0.68
LRRC28-213ENST00000559399 GMPSP49915 693 aaPredicted RBP19.28■□□□□ 0.68
LRRC28-213ENST00000559399 TNIP1Q15025 636 aa19.28■□□□□ 0.68
LRRC28-213ENST00000559399 CCDC30Q5VVM6 783 aa19.28■□□□□ 0.68
LRRC28-213ENST00000559399 MYD88Q99836 296 aa19.28■□□□□ 0.68
LRRC28-213ENST00000559399 NSFL1CQ9UNZ2 370 aaKnown RBP19.28■□□□□ 0.68
LRRC28-213ENST00000559399 DDX58O95786 925 aaKnown RBP19.27■□□□□ 0.68
LRRC28-213ENST00000559399 VEGFBP49765 207 aa19.27■□□□□ 0.68
LRRC28-213ENST00000559399 CCDC184Q52MB2 194 aa19.27■□□□□ 0.68
LRRC28-213ENST00000559399 TNS4Q8IZW8 715 aa19.27■□□□□ 0.68
LRRC28-213ENST00000559399 DUOX1Q9NRD9 1551 aa19.27■□□□□ 0.67
LRRC28-213ENST00000559399 RASSF10A6NK89 507 aa19.26■□□□□ 0.67
LRRC28-213ENST00000559399 CCDC27Q2M243 656 aa19.26■□□□□ 0.67
LRRC28-213ENST00000559399 WASHC4Q2M389 1173 aa19.26■□□□□ 0.67
LRRC28-213ENST00000559399 CCDC191Q8NCU4 936 aa19.26■□□□□ 0.67
LRRC28-213ENST00000559399 BCL2L13Q9BXK5 485 aa19.26■□□□□ 0.67
LRRC28-213ENST00000559399 ABT1Q9ULW3 272 aaKnown RBP19.26■□□□□ 0.67
LRRC28-213ENST00000559399 TSPYL6Q8N831 410 aa19.25■□□□□ 0.67
LRRC28-213ENST00000559399 TSR2Q969E8 191 aaKnown RBP19.25■□□□□ 0.67
LRRC28-213ENST00000559399 METTL22Q9BUU2 404 aaPredicted RBP19.25■□□□□ 0.67
LRRC28-213ENST00000559399 CWC25Q9NXE8 425 aaPredicted RBP19.25■□□□□ 0.67
LRRC28-213ENST00000559399 YDJCA8MPS7 323 aa19.24■□□□□ 0.67
LRRC28-213ENST00000559399 C6orf229H3BNL8 230 aa19.24■□□□□ 0.67
LRRC28-213ENST00000559399 PCCAP05165 728 aaPredicted RBP19.24■□□□□ 0.67
LRRC28-213ENST00000559399 RPS8P62241 208 aaKnown RBP19.24■□□□□ 0.67
LRRC28-213ENST00000559399 GPSM2P81274 684 aa19.24■□□□□ 0.67
LRRC28-213ENST00000559399 DEFB115Q30KQ5 88 aa19.24■□□□□ 0.67
LRRC28-213ENST00000559399 LAMB2P55268 1798 aa19.24■□□□□ 0.67
LRRC28-213ENST00000559399 TRAF5O00463 557 aa19.23■□□□□ 0.67
LRRC28-213ENST00000559399 ZEB1P37275 1124 aaPredicted RBP19.23■□□□□ 0.67
LRRC28-213ENST00000559399 WWC1Q8IX03 1113 aa19.23■□□□□ 0.67
LRRC28-213ENST00000559399 AIDAQ96BJ3 306 aa19.23■□□□□ 0.67
LRRC28-213ENST00000559399 EYA3Q99504 573 aa19.23■□□□□ 0.67
LRRC28-213ENST00000559399 POLLQ9UGP5 575 aa19.23■□□□□ 0.67
LRRC28-213ENST00000559399 MAP3K2Q9Y2U5 619 aa19.23■□□□□ 0.67
LRRC28-213ENST00000559399 LRRC37AA6NMS7 1700 aa19.22■□□□□ 0.67
LRRC28-213ENST00000559399 DDX60Q8IY21 1712 aaKnown RBP19.22■□□□□ 0.67
LRRC28-213ENST00000559399 FMR1Q06787 632 aaKnown RBP eCLIP19.22■□□□□ 0.67
LRRC28-213ENST00000559399 CCDC152Q4G0S7 254 aa19.22■□□□□ 0.67
LRRC28-213ENST00000559399 STK31Q9BXU1 1019 aa19.22■□□□□ 0.67
LRRC28-213ENST00000559399 DBNDD1Q9H9R9 158 aa19.22■□□□□ 0.67
LRRC28-213ENST00000559399 RIMBP2O15034 1052 aa19.21■□□□□ 0.67
LRRC28-213ENST00000559399 FOXN1O15353 648 aa19.21■□□□□ 0.67
LRRC28-213ENST00000559399 PDE8AO60658 829 aa19.21■□□□□ 0.67
LRRC28-213ENST00000559399 TBC1D16Q8TBP0 767 aa19.21■□□□□ 0.67
LRRC28-213ENST00000559399 MRS2Q9HD23 443 aa19.21■□□□□ 0.67
LRRC28-213ENST00000559399 SEC31BQ9NQW1 1179 aa19.21■□□□□ 0.67
LRRC28-213ENST00000559399 KSR2Q6VAB6 950 aa19.2■□□□□ 0.66
LRRC28-213ENST00000559399 TRPM4Q8TD43 1214 aa19.2■□□□□ 0.66
LRRC28-213ENST00000559399 ZC3H15Q8WU90 426 aaKnown RBP19.2■□□□□ 0.66
LRRC28-213ENST00000559399 JARID2Q92833 1246 aaPredicted RBP19.2■□□□□ 0.66
LRRC28-213ENST00000559399 PODXL2Q9NZ53 605 aa19.2■□□□□ 0.66
LRRC28-213ENST00000559399 CNOT7Q9UIV1 285 aaKnown RBP19.2■□□□□ 0.66
LRRC28-213ENST00000559399 COL4A1P02462 1669 aa19.2■□□□□ 0.66
LRRC28-213ENST00000559399 IL16Q14005 1332 aa19.2■□□□□ 0.66
LRRC28-213ENST00000559399 WDR33Q9C0J8 1336 aaKnown RBP19.2■□□□□ 0.66
LRRC28-213ENST00000559399 PI4KAP2A4QPH2 592 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 H7C1D1 291 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 PSMD14O00487 310 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 ECE2O60344 883 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 NEXNQ0ZGT2 675 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 TWISTNBQ3B726 338 aaPredicted RBP19.19■□□□□ 0.66
LRRC28-213ENST00000559399 NCBP3Q53F19 620 aaKnown RBP19.19■□□□□ 0.66
LRRC28-213ENST00000559399 CST9Q5W186 159 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 MICALL2Q8IY33 904 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 PI4KAP1Q8N8J0 262 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 DPF2Q92785 391 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 CCDC85AQ96PX6 553 aaPredicted RBP19.19■□□□□ 0.66
LRRC28-213ENST00000559399 ANKIB1Q9P2G1 1089 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 PGAP2Q9UHJ9 254 aa19.19■□□□□ 0.66
LRRC28-213ENST00000559399 ZBTB12Q9Y330 459 aaPredicted RBP19.19■□□□□ 0.66
LRRC28-213ENST00000559399 SHTN1A0MZ66 631 aa19.18■□□□□ 0.66
LRRC28-213ENST00000559399 ANP32CO43423 234 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms