RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 JARID2Q92833 1246 aaPredicted RBP17.61■□□□□ 0.41
VPS18-203ENST00000558855 RTFDC1Q9BY42 306 aaPredicted RBP17.61■□□□□ 0.41
VPS18-203ENST00000558855 HYPKQ9NX55 129 aa17.61■□□□□ 0.41
VPS18-203ENST00000558855 GNAI1P63096 354 aa17.6■□□□□ 0.41
VPS18-203ENST00000558855 SP8Q8IXZ3 490 aa17.6■□□□□ 0.41
VPS18-203ENST00000558855 CREBZFQ9NS37 354 aa17.6■□□□□ 0.41
VPS18-203ENST00000558855 ZNF646O15015 1829 aaPredicted RBP17.59■□□□□ 0.41
VPS18-203ENST00000558855 SHTN1A0MZ66 631 aa17.59■□□□□ 0.41
VPS18-203ENST00000558855 YDJCA8MPS7 323 aa17.59■□□□□ 0.41
VPS18-203ENST00000558855 EIF6P56537 245 aaKnown RBP17.59■□□□□ 0.41
VPS18-203ENST00000558855 CXCL9Q07325 125 aa17.59■□□□□ 0.41
VPS18-203ENST00000558855 NIM1KQ8IY84 436 aa17.59■□□□□ 0.41
VPS18-203ENST00000558855 BBOX1O75936 387 aa17.58■□□□□ 0.4
VPS18-203ENST00000558855 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.4
VPS18-203ENST00000558855 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.4
VPS18-203ENST00000558855 DPP8Q6V1X1 898 aaPredicted RBP17.58■□□□□ 0.4
VPS18-203ENST00000558855 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.4
VPS18-203ENST00000558855 MPNDQ8N594 471 aa17.58■□□□□ 0.4
VPS18-203ENST00000558855 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.4
VPS18-203ENST00000558855 MYD88Q99836 296 aa17.58■□□□□ 0.4
VPS18-203ENST00000558855 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
VPS18-203ENST00000558855 PSME4Q14997 1843 aa17.58■□□□□ 0.4
VPS18-203ENST00000558855 CNTNAP1P78357 1384 aa17.57■□□□□ 0.4
VPS18-203ENST00000558855 SF3B3Q15393 1217 aaKnown RBP17.57■□□□□ 0.4
VPS18-203ENST00000558855 SEC31BQ9NQW1 1179 aa17.57■□□□□ 0.4
VPS18-203ENST00000558855 IRS4O14654 1257 aaPredicted RBP17.56■□□□□ 0.4
VPS18-203ENST00000558855 KIAA2012Q0VF49 1180 aa17.56■□□□□ 0.4
VPS18-203ENST00000558855 TRIM28Q13263 835 aaKnown RBP17.56■□□□□ 0.4
VPS18-203ENST00000558855 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
VPS18-203ENST00000558855 G2E3Q7L622 706 aa17.56■□□□□ 0.4
VPS18-203ENST00000558855 RIC3Q7Z5B4 369 aa17.56■□□□□ 0.4
VPS18-203ENST00000558855 CNTROBQ8N137 903 aa17.56■□□□□ 0.4
VPS18-203ENST00000558855 THSD7BQ9C0I4 1608 aa17.56■□□□□ 0.4
VPS18-203ENST00000558855 RAD17O75943 681 aa17.55■□□□□ 0.4
VPS18-203ENST00000558855 GPSM2P81274 684 aa17.55■□□□□ 0.4
VPS18-203ENST00000558855 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
VPS18-203ENST00000558855 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
VPS18-203ENST00000558855 POLR2AP24928 1970 aaKnown RBP17.55■□□□□ 0.4
VPS18-203ENST00000558855 A0A1B0GUL6 1792 aa17.54■□□□□ 0.4
VPS18-203ENST00000558855 TRAF5O00463 557 aa17.54■□□□□ 0.4
VPS18-203ENST00000558855 GMPSP49915 693 aaPredicted RBP17.54■□□□□ 0.4
VPS18-203ENST00000558855 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
VPS18-203ENST00000558855 PNMA8AQ86V59 439 aaPredicted RBP17.54■□□□□ 0.4
VPS18-203ENST00000558855 GPRC5DQ9NZD1 345 aa17.54■□□□□ 0.4
VPS18-203ENST00000558855 POLLQ9UGP5 575 aa17.54■□□□□ 0.4
VPS18-203ENST00000558855 IGKV5-2P06315 115 aa17.53■□□□□ 0.4
VPS18-203ENST00000558855 CCDC85AQ96PX6 553 aaPredicted RBP17.53■□□□□ 0.4
VPS18-203ENST00000558855 KCNQ5Q9NR82 932 aa17.53■□□□□ 0.4
VPS18-203ENST00000558855 CACNA1FO60840 1977 aa17.53■□□□□ 0.4
VPS18-203ENST00000558855 TMEM88BA6NKF7 163 aa17.52■□□□□ 0.4
VPS18-203ENST00000558855 LMOD1P29536 600 aaPredicted RBP17.52■□□□□ 0.4
VPS18-203ENST00000558855 VEGFBP49765 207 aa17.52■□□□□ 0.4
VPS18-203ENST00000558855 HIRAP54198 1017 aaPredicted RBP17.52■□□□□ 0.4
VPS18-203ENST00000558855 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
VPS18-203ENST00000558855 CCDC27Q2M243 656 aa17.52■□□□□ 0.4
VPS18-203ENST00000558855 ZBTB38Q8NAP3 1195 aaPredicted RBP17.52■□□□□ 0.4
VPS18-203ENST00000558855 SUPT20HQ8NEM7 779 aa17.52■□□□□ 0.4
VPS18-203ENST00000558855 TRPM4Q8TD43 1214 aa17.52■□□□□ 0.4
VPS18-203ENST00000558855 METTL22Q9BUU2 404 aaPredicted RBP17.52■□□□□ 0.4
VPS18-203ENST00000558855 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
VPS18-203ENST00000558855 MAP3K2Q9Y2U5 619 aa17.52■□□□□ 0.4
VPS18-203ENST00000558855 RIMBP2O15034 1052 aa17.51■□□□□ 0.39
VPS18-203ENST00000558855 PCCAP05165 728 aaPredicted RBP17.51■□□□□ 0.39
VPS18-203ENST00000558855 CIAPIN1Q6FI81 312 aa17.51■□□□□ 0.39
VPS18-203ENST00000558855 DBNDD1Q9H9R9 158 aa17.51■□□□□ 0.39
VPS18-203ENST00000558855 MRS2Q9HD23 443 aa17.51■□□□□ 0.39
VPS18-203ENST00000558855 RTL9Q8NET4 1388 aa17.51■□□□□ 0.39
VPS18-203ENST00000558855 PI4KAP2A4QPH2 592 aa17.5■□□□□ 0.39
VPS18-203ENST00000558855 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
VPS18-203ENST00000558855 WTIPA6NIX2 430 aaPredicted RBP17.5■□□□□ 0.39
VPS18-203ENST00000558855 CWF19L2Q2TBE0 894 aaKnown RBP17.5■□□□□ 0.39
VPS18-203ENST00000558855 CCDC30Q5VVM6 783 aa17.5■□□□□ 0.39
VPS18-203ENST00000558855 DLK2Q6UY11 383 aa17.5■□□□□ 0.39
VPS18-203ENST00000558855 PI4KAP1Q8N8J0 262 aa17.5■□□□□ 0.39
VPS18-203ENST00000558855 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
VPS18-203ENST00000558855 NSFL1CQ9UNZ2 370 aaKnown RBP17.5■□□□□ 0.39
VPS18-203ENST00000558855 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
VPS18-203ENST00000558855 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
VPS18-203ENST00000558855 FANCIQ9NVI1 1328 aa17.49■□□□□ 0.39
VPS18-203ENST00000558855 FOXN1O15353 648 aa17.49■□□□□ 0.39
VPS18-203ENST00000558855 EGFRP00533 1210 aa17.49■□□□□ 0.39
VPS18-203ENST00000558855 TWISTNBQ3B726 338 aaPredicted RBP17.49■□□□□ 0.39
VPS18-203ENST00000558855 CST9Q5W186 159 aa17.49■□□□□ 0.39
VPS18-203ENST00000558855 USP50Q70EL3 339 aaPredicted RBP17.49■□□□□ 0.39
VPS18-203ENST00000558855 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
VPS18-203ENST00000558855 TBC1D16Q8TBP0 767 aa17.49■□□□□ 0.39
VPS18-203ENST00000558855 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
VPS18-203ENST00000558855 ADARB2Q9NS39 739 aaKnown RBP17.49■□□□□ 0.39
VPS18-203ENST00000558855 CWC25Q9NXE8 425 aaPredicted RBP17.49■□□□□ 0.39
VPS18-203ENST00000558855 PSMD14O00487 310 aa17.48■□□□□ 0.39
VPS18-203ENST00000558855 RPS8P62241 208 aaKnown RBP17.48■□□□□ 0.39
VPS18-203ENST00000558855 DOK7Q18PE1 504 aa17.48■□□□□ 0.39
VPS18-203ENST00000558855 TMC4Q7Z404 712 aa17.48■□□□□ 0.39
VPS18-203ENST00000558855 GLIS2Q9BZE0 524 aaPredicted RBP17.48■□□□□ 0.39
VPS18-203ENST00000558855 RASSF10A6NK89 507 aa17.47■□□□□ 0.39
VPS18-203ENST00000558855 PDE8AO60658 829 aa17.47■□□□□ 0.39
VPS18-203ENST00000558855 WASHC4Q2M389 1173 aa17.47■□□□□ 0.39
VPS18-203ENST00000558855 KSR2Q6VAB6 950 aa17.47■□□□□ 0.39
VPS18-203ENST00000558855 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
VPS18-203ENST00000558855 C6orf229H3BNL8 230 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms