RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 CXCL9Q07325 125 aa13.96□□□□□ -0.17
AP3S2-206ENST00000558806 KIAA2012Q0VF49 1180 aa13.96□□□□□ -0.17
AP3S2-206ENST00000558806 GRAPQ13588 217 aa13.96□□□□□ -0.17
AP3S2-206ENST00000558806 HDGFL1Q5TGJ6 251 aa13.96□□□□□ -0.17
AP3S2-206ENST00000558806 GRAPLQ8TC17 118 aaPredicted RBP13.96□□□□□ -0.17
AP3S2-206ENST00000558806 CHPF2Q9P2E5 772 aa13.96□□□□□ -0.17
AP3S2-206ENST00000558806 KRT24Q2M2I5 525 aa13.95□□□□□ -0.18
AP3S2-206ENST00000558806 PLBD2Q8NHP8 589 aa13.95□□□□□ -0.18
AP3S2-206ENST00000558806 DBF4Q9UBU7 674 aaPredicted RBP13.95□□□□□ -0.18
AP3S2-206ENST00000558806 TRIM35Q9UPQ4 493 aa13.95□□□□□ -0.18
AP3S2-206ENST00000558806 ECE1P42892 770 aa13.94□□□□□ -0.18
AP3S2-206ENST00000558806 GMPSP49915 693 aaPredicted RBP13.94□□□□□ -0.18
AP3S2-206ENST00000558806 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
AP3S2-206ENST00000558806 TNIP1Q15025 636 aa13.94□□□□□ -0.18
AP3S2-206ENST00000558806 CIAPIN1Q6FI81 312 aa13.94□□□□□ -0.18
AP3S2-206ENST00000558806 ANKRD13DQ6ZTN6 518 aa13.94□□□□□ -0.18
AP3S2-206ENST00000558806 LBX1P52954 281 aa13.93□□□□□ -0.18
AP3S2-206ENST00000558806 CST9Q5W186 159 aa13.93□□□□□ -0.18
AP3S2-206ENST00000558806 PAXIP1Q6ZW49 1069 aaPredicted RBP13.93□□□□□ -0.18
AP3S2-206ENST00000558806 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
AP3S2-206ENST00000558806 BCL2L13Q9BXK5 485 aa13.93□□□□□ -0.18
AP3S2-206ENST00000558806 HYPKQ9NX55 129 aa13.93□□□□□ -0.18
AP3S2-206ENST00000558806 TLL2Q9Y6L7 1015 aa13.93□□□□□ -0.18
AP3S2-206ENST00000558806 THSD7BQ9C0I4 1608 aa13.93□□□□□ -0.18
AP3S2-206ENST00000558806 TRAF5O00463 557 aa13.92□□□□□ -0.18
AP3S2-206ENST00000558806 FMR1Q06787 632 aaKnown RBP eCLIP13.92□□□□□ -0.18
AP3S2-206ENST00000558806 ZC3H15Q8WU90 426 aaKnown RBP13.92□□□□□ -0.18
AP3S2-206ENST00000558806 CAPNS2Q96L46 248 aa13.92□□□□□ -0.18
AP3S2-206ENST00000558806 ISCA1Q9BUE6 129 aa13.92□□□□□ -0.18
AP3S2-206ENST00000558806 BEGAINQ9BUH8 593 aa13.92□□□□□ -0.18
AP3S2-206ENST00000558806 ADAMTS8Q9UP79 889 aa13.92□□□□□ -0.18
AP3S2-206ENST00000558806 LRRC37AA6NMS7 1700 aa13.92□□□□□ -0.18
AP3S2-206ENST00000558806 TRPM7Q96QT4 1865 aa13.91□□□□□ -0.18
AP3S2-206ENST00000558806 RAD17O75943 681 aa13.91□□□□□ -0.18
AP3S2-206ENST00000558806 HSPA8P11142 646 aaKnown RBP13.91□□□□□ -0.18
AP3S2-206ENST00000558806 SF3B3Q15393 1217 aaKnown RBP13.91□□□□□ -0.18
AP3S2-206ENST00000558806 CYP4F22Q6NT55 531 aa13.91□□□□□ -0.18
AP3S2-206ENST00000558806 FAM89AQ96GI7 184 aa13.91□□□□□ -0.18
AP3S2-206ENST00000558806 GPR101Q96P66 508 aaPredicted RBP13.91□□□□□ -0.18
AP3S2-206ENST00000558806 PGAP2Q9UHJ9 254 aa13.91□□□□□ -0.18
AP3S2-206ENST00000558806 DUOX1Q9NRD9 1551 aa13.91□□□□□ -0.18
AP3S2-206ENST00000558806 DDX60Q8IY21 1712 aaKnown RBP13.9□□□□□ -0.18
AP3S2-206ENST00000558806 YDJCA8MPS7 323 aa13.9□□□□□ -0.18
AP3S2-206ENST00000558806 WASHC4Q2M389 1173 aa13.9□□□□□ -0.18
AP3S2-206ENST00000558806 DUSP27Q5VZP5 1158 aa13.9□□□□□ -0.18
AP3S2-206ENST00000558806 ATP5J2-PTCD1G3V325 749 aa13.89□□□□□ -0.19
AP3S2-206ENST00000558806 H7C1D1 291 aa13.89□□□□□ -0.19
AP3S2-206ENST00000558806 CELF2O95319 508 aaKnown RBP13.89□□□□□ -0.19
AP3S2-206ENST00000558806 MAP2K2P36507 400 aa13.89□□□□□ -0.19
AP3S2-206ENST00000558806 GRM1Q13255 1194 aa13.89□□□□□ -0.19
AP3S2-206ENST00000558806 TRIM28Q13263 835 aaKnown RBP13.89□□□□□ -0.19
AP3S2-206ENST00000558806 SAPCD2Q86UD0 394 aa13.89□□□□□ -0.19
AP3S2-206ENST00000558806 CELF1Q92879 486 aaKnown RBP13.89□□□□□ -0.19
AP3S2-206ENST00000558806 ZNF428Q96B54 188 aa13.89□□□□□ -0.19
AP3S2-206ENST00000558806 HHIPL1Q96JK4 782 aa13.89□□□□□ -0.19
AP3S2-206ENST00000558806 MBIPQ9NS73 344 aa13.89□□□□□ -0.19
AP3S2-206ENST00000558806 CNOT7Q9UIV1 285 aaKnown RBP13.89□□□□□ -0.19
AP3S2-206ENST00000558806 NSFL1CQ9UNZ2 370 aaKnown RBP13.89□□□□□ -0.19
AP3S2-206ENST00000558806 HSP90B1P14625 803 aaKnown RBP13.88□□□□□ -0.19
AP3S2-206ENST00000558806 HIRAP54198 1017 aaPredicted RBP13.88□□□□□ -0.19
AP3S2-206ENST00000558806 CALD1Q05682 793 aaKnown RBP13.88□□□□□ -0.19
AP3S2-206ENST00000558806 CDC37L1Q7L3B6 337 aa13.88□□□□□ -0.19
AP3S2-206ENST00000558806 MICALL2Q8IY33 904 aa13.88□□□□□ -0.19
AP3S2-206ENST00000558806 DPF2Q92785 391 aa13.88□□□□□ -0.19
AP3S2-206ENST00000558806 EYA3Q99504 573 aa13.88□□□□□ -0.19
AP3S2-206ENST00000558806 GLIS2Q9BZE0 524 aaPredicted RBP13.88□□□□□ -0.19
AP3S2-206ENST00000558806 TAF1P21675 1872 aa13.88□□□□□ -0.19
AP3S2-206ENST00000558806 C6orf229H3BNL8 230 aa13.87□□□□□ -0.19
AP3S2-206ENST00000558806 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
AP3S2-206ENST00000558806 ZNF853P0CG23 659 aa13.87□□□□□ -0.19
AP3S2-206ENST00000558806 GOLGA2Q08379 1002 aa13.87□□□□□ -0.19
AP3S2-206ENST00000558806 RTL5Q5HYW3 569 aaPredicted RBP13.87□□□□□ -0.19
AP3S2-206ENST00000558806 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
AP3S2-206ENST00000558806 TRPM4Q8TD43 1214 aa13.87□□□□□ -0.19
AP3S2-206ENST00000558806 IFT57Q9NWB7 429 aa13.87□□□□□ -0.19
AP3S2-206ENST00000558806 PSMD14O00487 310 aa13.86□□□□□ -0.19
AP3S2-206ENST00000558806 RPS12P25398 132 aaKnown RBP13.86□□□□□ -0.19
AP3S2-206ENST00000558806 RPS8P62241 208 aaKnown RBP13.86□□□□□ -0.19
AP3S2-206ENST00000558806 GNAI1P63096 354 aa13.86□□□□□ -0.19
AP3S2-206ENST00000558806 GPSM2P81274 684 aa13.86□□□□□ -0.19
AP3S2-206ENST00000558806 ZBTB38Q8NAP3 1195 aaPredicted RBP13.86□□□□□ -0.19
AP3S2-206ENST00000558806 CHMP4AQ9BY43 222 aa13.86□□□□□ -0.19
AP3S2-206ENST00000558806 PRKRIP1Q9H875 184 aaPredicted RBP13.86□□□□□ -0.19
AP3S2-206ENST00000558806 ZNF408Q9H9D4 720 aa13.86□□□□□ -0.19
AP3S2-206ENST00000558806 DBNDD1Q9H9R9 158 aa13.86□□□□□ -0.19
AP3S2-206ENST00000558806 POLLQ9UGP5 575 aa13.86□□□□□ -0.19
AP3S2-206ENST00000558806 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
AP3S2-206ENST00000558806 RIMBP2O15034 1052 aa13.85□□□□□ -0.19
AP3S2-206ENST00000558806 CA12O43570 354 aa13.85□□□□□ -0.19
AP3S2-206ENST00000558806 ECE2O60344 883 aa13.85□□□□□ -0.19
AP3S2-206ENST00000558806 SHTN1A0MZ66 631 aa13.84□□□□□ -0.19
AP3S2-206ENST00000558806 APAF1O14727 1248 aa13.84□□□□□ -0.19
AP3S2-206ENST00000558806 AOC2O75106 756 aa13.84□□□□□ -0.19
AP3S2-206ENST00000558806 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
AP3S2-206ENST00000558806 CCDC191Q8NCU4 936 aa13.84□□□□□ -0.19
AP3S2-206ENST00000558806 TBC1D16Q8TBP0 767 aa13.84□□□□□ -0.19
AP3S2-206ENST00000558806 ABHD8Q96I13 439 aa13.84□□□□□ -0.19
AP3S2-206ENST00000558806 ZC3H12CQ9C0D7 883 aaKnown RBP13.84□□□□□ -0.19
AP3S2-206ENST00000558806 PHAXQ9H814 394 aaKnown RBP13.84□□□□□ -0.19
AP3S2-206ENST00000558806 PODXL2Q9NZ53 605 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms