RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 HCLS1P14317 486 aaPredicted RBP10.81□□□□□ -0.68
TPM1-213ENST00000558400 SF3B3Q15393 1217 aaKnown RBP10.81□□□□□ -0.68
TPM1-213ENST00000558400 G2E3Q7L622 706 aa10.81□□□□□ -0.68
TPM1-213ENST00000558400 TMC4Q7Z404 712 aa10.81□□□□□ -0.68
TPM1-213ENST00000558400 TRMT2AQ8IZ69 625 aaKnown RBP10.81□□□□□ -0.68
TPM1-213ENST00000558400 TAOK3Q9H2K8 898 aa10.81□□□□□ -0.68
TPM1-213ENST00000558400 RNF181Q9P0P0 153 aa10.81□□□□□ -0.68
TPM1-213ENST00000558400 DPY19L2Q6NUT2 758 aa10.8□□□□□ -0.68
TPM1-213ENST00000558400 SYNE4Q8N205 404 aa10.8□□□□□ -0.68
TPM1-213ENST00000558400 LINS1Q8NG48 757 aa10.8□□□□□ -0.68
TPM1-213ENST00000558400 DNAAF4Q8WXU2 420 aa10.8□□□□□ -0.68
TPM1-213ENST00000558400 ABCC12Q96J65 1359 aa10.79□□□□□ -0.68
TPM1-213ENST00000558400 NFKBIEO00221 500 aa10.79□□□□□ -0.68
TPM1-213ENST00000558400 PDE8AO60658 829 aa10.79□□□□□ -0.68
TPM1-213ENST00000558400 ALDH1L2Q3SY69 923 aa10.79□□□□□ -0.68
TPM1-213ENST00000558400 SP8Q8IXZ3 490 aa10.79□□□□□ -0.68
TPM1-213ENST00000558400 VPS33BQ9H267 617 aa10.79□□□□□ -0.68
TPM1-213ENST00000558400 NEURL1BA8MQ27 555 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 IGKV5-2P06315 115 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 FKBP4Q02790 459 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM1-213ENST00000558400 GRAPQ13588 217 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 CCDC152Q4G0S7 254 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 RTL5Q5HYW3 569 aaPredicted RBP10.78□□□□□ -0.68
TPM1-213ENST00000558400 POTEHQ6S545 545 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 SMC1BQ8NDV3 1235 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 GRAPLQ8TC17 118 aaPredicted RBP10.78□□□□□ -0.68
TPM1-213ENST00000558400 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 PSMD1Q99460 953 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 ATP6V0A2Q9Y487 856 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 KDM2BQ8NHM5 1336 aa10.78□□□□□ -0.68
TPM1-213ENST00000558400 ANKRD31Q8N7Z5 1873 aa10.77□□□□□ -0.69
TPM1-213ENST00000558400 H7C1W4 665 aa10.77□□□□□ -0.69
TPM1-213ENST00000558400 PPEF1O14829 653 aaPredicted RBP10.77□□□□□ -0.69
TPM1-213ENST00000558400 RPS8P62241 208 aaKnown RBP10.77□□□□□ -0.69
TPM1-213ENST00000558400 RASSF7Q02833 373 aa10.77□□□□□ -0.69
TPM1-213ENST00000558400 GCKRQ14397 625 aa10.77□□□□□ -0.69
TPM1-213ENST00000558400 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
TPM1-213ENST00000558400 SUPT20HQ8NEM7 779 aa10.77□□□□□ -0.69
TPM1-213ENST00000558400 PTPRCP08575 1304 aa10.77□□□□□ -0.69
TPM1-213ENST00000558400 CDHR2Q9BYE9 1310 aa10.77□□□□□ -0.69
TPM1-213ENST00000558400 GLTPD2A6NH11 291 aa10.76□□□□□ -0.69
TPM1-213ENST00000558400 ALDH1L1O75891 902 aa10.76□□□□□ -0.69
TPM1-213ENST00000558400 HNRNPUQ00839 825 aaKnown RBP eCLIP10.76□□□□□ -0.69
TPM1-213ENST00000558400 CWF19L2Q2TBE0 894 aaKnown RBP10.76□□□□□ -0.69
TPM1-213ENST00000558400 MRPL50Q8N5N7 158 aaKnown RBP10.76□□□□□ -0.69
TPM1-213ENST00000558400 JDP2Q8WYK2 163 aa10.76□□□□□ -0.69
TPM1-213ENST00000558400 ABCC4O15439 1325 aa10.76□□□□□ -0.69
TPM1-213ENST00000558400 CACNA1FO60840 1977 aa10.76□□□□□ -0.69
TPM1-213ENST00000558400 BRPF1P55201 1214 aaPredicted RBP10.75□□□□□ -0.69
TPM1-213ENST00000558400 BEND3Q5T5X7 828 aa10.75□□□□□ -0.69
TPM1-213ENST00000558400 MPNDQ8N594 471 aa10.75□□□□□ -0.69
TPM1-213ENST00000558400 SSH1Q8WYL5 1049 aa10.75□□□□□ -0.69
TPM1-213ENST00000558400 PLA2G12BQ9BX93 195 aa10.75□□□□□ -0.69
TPM1-213ENST00000558400 SRCIN1Q9C0H9 1055 aa10.75□□□□□ -0.69
TPM1-213ENST00000558400 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
TPM1-213ENST00000558400 DLEC1Q9Y238 1755 aa10.75□□□□□ -0.69
TPM1-213ENST00000558400 SLX4Q8IY92 1834 aa10.74□□□□□ -0.69
TPM1-213ENST00000558400 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
TPM1-213ENST00000558400 F6X3S4 739 aa10.74□□□□□ -0.69
TPM1-213ENST00000558400 IARSP41252 1262 aaKnown RBP10.74□□□□□ -0.69
TPM1-213ENST00000558400 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
TPM1-213ENST00000558400 DPP8Q6V1X1 898 aaPredicted RBP10.74□□□□□ -0.69
TPM1-213ENST00000558400 UBE3BQ7Z3V4 1068 aa10.74□□□□□ -0.69
TPM1-213ENST00000558400 TTLL11Q8NHH1 800 aa10.74□□□□□ -0.69
TPM1-213ENST00000558400 CDC5LQ99459 802 aaKnown RBP10.74□□□□□ -0.69
TPM1-213ENST00000558400 RTFDC1Q9BY42 306 aaPredicted RBP10.74□□□□□ -0.69
TPM1-213ENST00000558400 ZNF277Q9NRM2 450 aaPredicted RBP10.74□□□□□ -0.69
TPM1-213ENST00000558400 C9orf78Q9NZ63 289 aaPredicted RBP10.74□□□□□ -0.69
TPM1-213ENST00000558400 VEGFAP15692 232 aaPredicted RBP10.73□□□□□ -0.69
TPM1-213ENST00000558400 CTSWP56202 376 aa10.73□□□□□ -0.69
TPM1-213ENST00000558400 SLC4A10Q6U841 1118 aa10.73□□□□□ -0.69
TPM1-213ENST00000558400 OLFM4Q6UX06 510 aa10.73□□□□□ -0.69
TPM1-213ENST00000558400 ANKRD18AQ8IVF6 992 aa10.73□□□□□ -0.69
TPM1-213ENST00000558400 JARID2Q92833 1246 aaPredicted RBP10.73□□□□□ -0.69
TPM1-213ENST00000558400 SMC4Q9NTJ3 1288 aa10.73□□□□□ -0.69
TPM1-213ENST00000558400 GRM8O00222 908 aa10.72□□□□□ -0.69
TPM1-213ENST00000558400 IPO8O15397 1037 aaKnown RBP10.72□□□□□ -0.69
TPM1-213ENST00000558400 CSF1RP07333 972 aa10.72□□□□□ -0.69
TPM1-213ENST00000558400 LARGE2Q8N3Y3 721 aa10.72□□□□□ -0.69
TPM1-213ENST00000558400 ARHGAP45Q92619 1136 aa10.72□□□□□ -0.69
TPM1-213ENST00000558400 CELF1Q92879 486 aaKnown RBP10.72□□□□□ -0.69
TPM1-213ENST00000558400 RRAGCQ9HB90 399 aa10.72□□□□□ -0.69
TPM1-213ENST00000558400 NSFL1CQ9UNZ2 370 aaKnown RBP10.72□□□□□ -0.69
TPM1-213ENST00000558400 HDAC5Q9UQL6 1122 aa10.72□□□□□ -0.69
TPM1-213ENST00000558400 ANKRD36CQ5JPF3 1778 aa10.72□□□□□ -0.69
TPM1-213ENST00000558400 FZD9O00144 591 aa10.71□□□□□ -0.69
TPM1-213ENST00000558400 RARSP54136 660 aaKnown RBP10.71□□□□□ -0.69
TPM1-213ENST00000558400 CASP7P55210 303 aa10.71□□□□□ -0.69
TPM1-213ENST00000558400 EIF6P56537 245 aaKnown RBP10.71□□□□□ -0.69
TPM1-213ENST00000558400 EYA3Q99504 573 aa10.71□□□□□ -0.69
TPM1-213ENST00000558400 API5Q9BZZ5 524 aaKnown RBP10.71□□□□□ -0.69
TPM1-213ENST00000558400 PRDM10Q9NQV6 1147 aa10.71□□□□□ -0.69
TPM1-213ENST00000558400 SEC31BQ9NQW1 1179 aa10.71□□□□□ -0.69
TPM1-213ENST00000558400 BSDC1Q9NW68 430 aaPredicted RBP10.71□□□□□ -0.69
TPM1-213ENST00000558400 COL11A2P13942 1736 aaPredicted RBP10.7□□□□□ -0.7
TPM1-213ENST00000558400 RTL9Q8NET4 1388 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 ZBED9Q6R2W3 1325 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 IQCA1LA6NCM1 817 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 PPIP5K2O43314 1243 aa10.7□□□□□ -0.7
TPM1-213ENST00000558400 IGHMBP2P38935 993 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms