RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
TPM1-211ENST00000558314 MYD88Q99836 296 aa20.1■□□□□ 0.81
TPM1-211ENST00000558314 ISCA1Q9BUE6 129 aa20.1■□□□□ 0.81
TPM1-211ENST00000558314 LAMB2P55268 1798 aa20.09■□□□□ 0.81
TPM1-211ENST00000558314 ITGBL1O95965 494 aaPredicted RBP20.09■□□□□ 0.81
TPM1-211ENST00000558314 SCNN1DP51172 638 aa20.09■□□□□ 0.81
TPM1-211ENST00000558314 CCDC184Q52MB2 194 aa20.09■□□□□ 0.81
TPM1-211ENST00000558314 C8orf58Q8NAV2 365 aa20.09■□□□□ 0.81
TPM1-211ENST00000558314 ZNRF3Q9ULT6 936 aa20.09■□□□□ 0.81
TPM1-211ENST00000558314 IRS4O14654 1257 aaPredicted RBP20.08■□□□□ 0.81
TPM1-211ENST00000558314 CAPN15O75808 1086 aa20.08■□□□□ 0.81
TPM1-211ENST00000558314 RAD17O75943 681 aa20.08■□□□□ 0.81
TPM1-211ENST00000558314 JARID2Q92833 1246 aaPredicted RBP20.08■□□□□ 0.81
TPM1-211ENST00000558314 BCL2L13Q9BXK5 485 aa20.08■□□□□ 0.81
TPM1-211ENST00000558314 ABT1Q9ULW3 272 aaKnown RBP20.08■□□□□ 0.81
TPM1-211ENST00000558314 RIMBP2O15034 1052 aa20.07■□□□□ 0.8
TPM1-211ENST00000558314 CXCL9Q07325 125 aa20.07■□□□□ 0.8
TPM1-211ENST00000558314 PAXIP1Q6ZW49 1069 aaPredicted RBP20.07■□□□□ 0.8
TPM1-211ENST00000558314 CELF1Q92879 486 aaKnown RBP20.07■□□□□ 0.8
TPM1-211ENST00000558314 NSFL1CQ9UNZ2 370 aaKnown RBP20.07■□□□□ 0.8
TPM1-211ENST00000558314 C6orf229H3BNL8 230 aa20.06■□□□□ 0.8
TPM1-211ENST00000558314 TAF1P21675 1872 aa20.06■□□□□ 0.8
TPM1-211ENST00000558314 GMPSP49915 693 aaPredicted RBP20.06■□□□□ 0.8
TPM1-211ENST00000558314 FMR1Q06787 632 aaKnown RBP eCLIP20.06■□□□□ 0.8
TPM1-211ENST00000558314 CIAPIN1Q6FI81 312 aa20.06■□□□□ 0.8
TPM1-211ENST00000558314 TNS4Q8IZW8 715 aa20.06■□□□□ 0.8
TPM1-211ENST00000558314 TSR2Q969E8 191 aaKnown RBP20.06■□□□□ 0.8
TPM1-211ENST00000558314 CCDC85AQ96PX6 553 aaPredicted RBP20.06■□□□□ 0.8
TPM1-211ENST00000558314 RTFDC1Q9BY42 306 aaPredicted RBP20.06■□□□□ 0.8
TPM1-211ENST00000558314 CNTNAP1P78357 1384 aa20.06■□□□□ 0.8
TPM1-211ENST00000558314 VEGFBP49765 207 aa20.05■□□□□ 0.8
TPM1-211ENST00000558314 KIAA2012Q0VF49 1180 aa20.05■□□□□ 0.8
TPM1-211ENST00000558314 GRM1Q13255 1194 aa20.05■□□□□ 0.8
TPM1-211ENST00000558314 VPS33BQ9H267 617 aa20.05■□□□□ 0.8
TPM1-211ENST00000558314 LTBP1Q14766 1721 aa20.05■□□□□ 0.8
TPM1-211ENST00000558314 SF3B3Q15393 1217 aaKnown RBP20.04■□□□□ 0.8
TPM1-211ENST00000558314 CCDC30Q5VVM6 783 aa20.04■□□□□ 0.8
TPM1-211ENST00000558314 USP50Q70EL3 339 aaPredicted RBP20.04■□□□□ 0.8
TPM1-211ENST00000558314 TMC4Q7Z404 712 aa20.04■□□□□ 0.8
TPM1-211ENST00000558314 TSPYL6Q8N831 410 aa20.04■□□□□ 0.8
TPM1-211ENST00000558314 GPRC5DQ9NZD1 345 aa20.04■□□□□ 0.8
TPM1-211ENST00000558314 SALL2Q9Y467 1007 aaPredicted RBP20.04■□□□□ 0.8
TPM1-211ENST00000558314 TRAF5O00463 557 aa20.03■□□□□ 0.8
TPM1-211ENST00000558314 DDX58O95786 925 aaKnown RBP20.03■□□□□ 0.8
TPM1-211ENST00000558314 GPSM2P81274 684 aa20.03■□□□□ 0.8
TPM1-211ENST00000558314 TNIP1Q15025 636 aa20.03■□□□□ 0.8
TPM1-211ENST00000558314 WASHC4Q2M389 1173 aa20.03■□□□□ 0.8
TPM1-211ENST00000558314 GPR101Q96P66 508 aaPredicted RBP20.03■□□□□ 0.8
TPM1-211ENST00000558314 DBNDD1Q9H9R9 158 aa20.03■□□□□ 0.8
TPM1-211ENST00000558314 DDX60Q8IY21 1712 aaKnown RBP20.02■□□□□ 0.8
TPM1-211ENST00000558314 DEFB115Q30KQ5 88 aa20.02■□□□□ 0.8
TPM1-211ENST00000558314 ZBTB38Q8NAP3 1195 aaPredicted RBP20.02■□□□□ 0.8
TPM1-211ENST00000558314 AIDAQ96BJ3 306 aa20.02■□□□□ 0.8
TPM1-211ENST00000558314 SEC31BQ9NQW1 1179 aa20.02■□□□□ 0.8
TPM1-211ENST00000558314 ADARB2Q9NS39 739 aaKnown RBP20.02■□□□□ 0.8
TPM1-211ENST00000558314 ADAMTSL1Q8N6G6 1762 aa20.02■□□□□ 0.8
TPM1-211ENST00000558314 TRIM28Q13263 835 aaKnown RBP20.01■□□□□ 0.79
TPM1-211ENST00000558314 DOK7Q18PE1 504 aa20.01■□□□□ 0.79
TPM1-211ENST00000558314 STK31Q9BXU1 1019 aa20.01■□□□□ 0.79
TPM1-211ENST00000558314 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
TPM1-211ENST00000558314 CWC25Q9NXE8 425 aaPredicted RBP20.01■□□□□ 0.79
TPM1-211ENST00000558314 MAP3K2Q9Y2U5 619 aa20.01■□□□□ 0.79
TPM1-211ENST00000558314 YDJCA8MPS7 323 aa20■□□□□ 0.79
TPM1-211ENST00000558314 G3V3G9 751 aa20■□□□□ 0.79
TPM1-211ENST00000558314 RPS8P62241 208 aaKnown RBP20■□□□□ 0.79
TPM1-211ENST00000558314 DCAF8Q5TAQ9 597 aa20■□□□□ 0.79
TPM1-211ENST00000558314 ZBTB12Q9Y330 459 aaPredicted RBP20■□□□□ 0.79
TPM1-211ENST00000558314 SHTN1A0MZ66 631 aa19.99■□□□□ 0.79
TPM1-211ENST00000558314 HSP90B1P14625 803 aaKnown RBP19.99■□□□□ 0.79
TPM1-211ENST00000558314 CCDC191Q8NCU4 936 aa19.99■□□□□ 0.79
TPM1-211ENST00000558314 METTL22Q9BUU2 404 aaPredicted RBP19.99■□□□□ 0.79
TPM1-211ENST00000558314 CHMP4AQ9BY43 222 aa19.99■□□□□ 0.79
TPM1-211ENST00000558314 ZNF408Q9H9D4 720 aa19.99■□□□□ 0.79
TPM1-211ENST00000558314 ANKIB1Q9P2G1 1089 aa19.99■□□□□ 0.79
TPM1-211ENST00000558314 POLLQ9UGP5 575 aa19.99■□□□□ 0.79
TPM1-211ENST00000558314 PCNTO95613 3336 aa19.98■□□□□ 0.79
TPM1-211ENST00000558314 FOXN1O15353 648 aa19.98■□□□□ 0.79
TPM1-211ENST00000558314 ANP32CO43423 234 aa19.98■□□□□ 0.79
TPM1-211ENST00000558314 PCCAP05165 728 aaPredicted RBP19.98■□□□□ 0.79
TPM1-211ENST00000558314 CCDC152Q4G0S7 254 aa19.98■□□□□ 0.79
TPM1-211ENST00000558314 EYA3Q99504 573 aa19.98■□□□□ 0.79
TPM1-211ENST00000558314 CNOT7Q9UIV1 285 aaKnown RBP19.98■□□□□ 0.79
TPM1-211ENST00000558314 COL4A1P02462 1669 aa19.97■□□□□ 0.79
TPM1-211ENST00000558314 PI4KAP2A4QPH2 592 aa19.97■□□□□ 0.79
TPM1-211ENST00000558314 H7C1D1 291 aa19.97■□□□□ 0.79
TPM1-211ENST00000558314 PSMD14O00487 310 aa19.97■□□□□ 0.79
TPM1-211ENST00000558314 ECE2O60344 883 aa19.97■□□□□ 0.79
TPM1-211ENST00000558314 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
TPM1-211ENST00000558314 WWC1Q8IX03 1113 aa19.97■□□□□ 0.79
TPM1-211ENST00000558314 MICALL2Q8IY33 904 aa19.97■□□□□ 0.79
TPM1-211ENST00000558314 PI4KAP1Q8N8J0 262 aa19.97■□□□□ 0.79
TPM1-211ENST00000558314 TRPM4Q8TD43 1214 aa19.97■□□□□ 0.79
TPM1-211ENST00000558314 GLIS2Q9BZE0 524 aaPredicted RBP19.97■□□□□ 0.79
TPM1-211ENST00000558314 WDR33Q9C0J8 1336 aaKnown RBP19.97■□□□□ 0.79
TPM1-211ENST00000558314 DUOX1Q9NRD9 1551 aa19.96■□□□□ 0.79
TPM1-211ENST00000558314 RASSF10A6NK89 507 aa19.96■□□□□ 0.79
TPM1-211ENST00000558314 PDE8AO60658 829 aa19.96■□□□□ 0.79
TPM1-211ENST00000558314 UFL1O94874 794 aa19.96■□□□□ 0.79
TPM1-211ENST00000558314 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
TPM1-211ENST00000558314 TWISTNBQ3B726 338 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms