RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 CLEC11AQ9Y240 323 aa21.29■■□□□ 1
RPL28-205ENST00000558131 CXCL9Q07325 125 aa21.28■■□□□ 1
RPL28-205ENST00000558131 KIAA2012Q0VF49 1180 aa21.28■■□□□ 1
RPL28-205ENST00000558131 IFT57Q9NWB7 429 aa21.28■■□□□ 1
RPL28-205ENST00000558131 PSME4Q14997 1843 aa21.27■■□□□ 1
RPL28-205ENST00000558131 ATP5J2-PTCD1G3V325 749 aa21.27■■□□□ 1
RPL28-205ENST00000558131 FMR1Q06787 632 aaKnown RBP eCLIP21.27■■□□□ 1
RPL28-205ENST00000558131 DPP8Q6V1X1 898 aaPredicted RBP21.27■■□□□ 1
RPL28-205ENST00000558131 DDX46Q7L014 1031 aaKnown RBP21.27■■□□□ 1
RPL28-205ENST00000558131 FAM89AQ96GI7 184 aa21.27■■□□□ 1
RPL28-205ENST00000558131 HYPKQ9NX55 129 aa21.27■■□□□ 1
RPL28-205ENST00000558131 SCN9AQ15858 1988 aa21.27■□□□□ 0.99
RPL28-205ENST00000558131 RASSF10A6NK89 507 aa21.26■□□□□ 0.99
RPL28-205ENST00000558131 VEGFBP49765 207 aa21.26■□□□□ 0.99
RPL28-205ENST00000558131 SF3B3Q15393 1217 aaKnown RBP21.26■□□□□ 0.99
RPL28-205ENST00000558131 CELF1Q92879 486 aaKnown RBP21.26■□□□□ 0.99
RPL28-205ENST00000558131 PHAXQ9H814 394 aaKnown RBP21.26■□□□□ 0.99
RPL28-205ENST00000558131 GPRC5DQ9NZD1 345 aa21.26■□□□□ 0.99
RPL28-205ENST00000558131 ZNRF3Q9ULT6 936 aa21.26■□□□□ 0.99
RPL28-205ENST00000558131 MYH3P11055 1940 aa21.25■□□□□ 0.99
RPL28-205ENST00000558131 ZNF646O15015 1829 aaPredicted RBP21.25■□□□□ 0.99
RPL28-205ENST00000558131 SPEF2Q9C093 1822 aa21.25■□□□□ 0.99
RPL28-205ENST00000558131 YDJCA8MPS7 323 aa21.25■□□□□ 0.99
RPL28-205ENST00000558131 LMOD1P29536 600 aaPredicted RBP21.25■□□□□ 0.99
RPL28-205ENST00000558131 TRIM28Q13263 835 aaKnown RBP21.25■□□□□ 0.99
RPL28-205ENST00000558131 CCDC184Q52MB2 194 aa21.25■□□□□ 0.99
RPL28-205ENST00000558131 MPNDQ8N594 471 aa21.25■□□□□ 0.99
RPL28-205ENST00000558131 SUPT20HQ8NEM7 779 aa21.25■□□□□ 0.99
RPL28-205ENST00000558131 USP50Q70EL3 339 aaPredicted RBP21.24■□□□□ 0.99
RPL28-205ENST00000558131 FOXN1O15353 648 aa21.23■□□□□ 0.99
RPL28-205ENST00000558131 TMC4Q7Z404 712 aa21.23■□□□□ 0.99
RPL28-205ENST00000558131 C8orf58Q8NAV2 365 aa21.23■□□□□ 0.99
RPL28-205ENST00000558131 CDHR2Q9BYE9 1310 aa21.23■□□□□ 0.99
RPL28-205ENST00000558131 GMPSP49915 693 aaPredicted RBP21.22■□□□□ 0.99
RPL28-205ENST00000558131 GNAI1P63096 354 aa21.22■□□□□ 0.99
RPL28-205ENST00000558131 RTL5Q5HYW3 569 aaPredicted RBP21.21■□□□□ 0.99
RPL28-205ENST00000558131 TNS4Q8IZW8 715 aa21.21■□□□□ 0.99
RPL28-205ENST00000558131 TMX4Q9H1E5 349 aaPredicted RBP21.21■□□□□ 0.99
RPL28-205ENST00000558131 ADARB2Q9NS39 739 aaKnown RBP21.21■□□□□ 0.99
RPL28-205ENST00000558131 TRAF5O00463 557 aa21.2■□□□□ 0.98
RPL28-205ENST00000558131 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
RPL28-205ENST00000558131 CST9Q5W186 159 aa21.2■□□□□ 0.98
RPL28-205ENST00000558131 CIAPIN1Q6FI81 312 aa21.2■□□□□ 0.98
RPL28-205ENST00000558131 SHTN1A0MZ66 631 aa21.19■□□□□ 0.98
RPL28-205ENST00000558131 IRS4O14654 1257 aaPredicted RBP21.19■□□□□ 0.98
RPL28-205ENST00000558131 RAD17O75943 681 aa21.19■□□□□ 0.98
RPL28-205ENST00000558131 TSPYL6Q8N831 410 aa21.19■□□□□ 0.98
RPL28-205ENST00000558131 HIRAP54198 1017 aaPredicted RBP21.18■□□□□ 0.98
RPL28-205ENST00000558131 GPSM2P81274 684 aa21.18■□□□□ 0.98
RPL28-205ENST00000558131 ZBTB38Q8NAP3 1195 aaPredicted RBP21.18■□□□□ 0.98
RPL28-205ENST00000558131 WBP1LQ9NX94 342 aa21.18■□□□□ 0.98
RPL28-205ENST00000558131 POLLQ9UGP5 575 aa21.18■□□□□ 0.98
RPL28-205ENST00000558131 PGAP2Q9UHJ9 254 aa21.18■□□□□ 0.98
RPL28-205ENST00000558131 CALD1Q05682 793 aaKnown RBP21.17■□□□□ 0.98
RPL28-205ENST00000558131 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
RPL28-205ENST00000558131 DEFB115Q30KQ5 88 aa21.17■□□□□ 0.98
RPL28-205ENST00000558131 RIC3Q7Z5B4 369 aa21.17■□□□□ 0.98
RPL28-205ENST00000558131 TRPM4Q8TD43 1214 aa21.17■□□□□ 0.98
RPL28-205ENST00000558131 MYD88Q99836 296 aa21.17■□□□□ 0.98
RPL28-205ENST00000558131 RTL9Q8NET4 1388 aa21.17■□□□□ 0.98
RPL28-205ENST00000558131 WDR33Q9C0J8 1336 aaKnown RBP21.16■□□□□ 0.98
RPL28-205ENST00000558131 SEC31BQ9NQW1 1179 aa21.16■□□□□ 0.98
RPL28-205ENST00000558131 CCDC191Q8NCU4 936 aa21.15■□□□□ 0.98
RPL28-205ENST00000558131 TSR2Q969E8 191 aaKnown RBP21.15■□□□□ 0.98
RPL28-205ENST00000558131 GPR101Q96P66 508 aaPredicted RBP21.15■□□□□ 0.98
RPL28-205ENST00000558131 DBNDD1Q9H9R9 158 aa21.15■□□□□ 0.98
RPL28-205ENST00000558131 ABT1Q9ULW3 272 aaKnown RBP21.15■□□□□ 0.98
RPL28-205ENST00000558131 NSFL1CQ9UNZ2 370 aaKnown RBP21.15■□□□□ 0.98
RPL28-205ENST00000558131 POLR2AP24928 1970 aaKnown RBP21.15■□□□□ 0.98
RPL28-205ENST00000558131 A0A1B0GUL6 1792 aa21.15■□□□□ 0.98
RPL28-205ENST00000558131 PCCAP05165 728 aaPredicted RBP21.14■□□□□ 0.97
RPL28-205ENST00000558131 WASHC4Q2M389 1173 aa21.14■□□□□ 0.97
RPL28-205ENST00000558131 TBC1D16Q8TBP0 767 aa21.14■□□□□ 0.97
RPL28-205ENST00000558131 METTL22Q9BUU2 404 aaPredicted RBP21.14■□□□□ 0.97
RPL28-205ENST00000558131 ZBTB12Q9Y330 459 aaPredicted RBP21.14■□□□□ 0.97
RPL28-205ENST00000558131 TLL2Q9Y6L7 1015 aa21.14■□□□□ 0.97
RPL28-205ENST00000558131 CACNA1FO60840 1977 aa21.14■□□□□ 0.97
RPL28-205ENST00000558131 PSMD14O00487 310 aa21.13■□□□□ 0.97
RPL28-205ENST00000558131 EGFRP00533 1210 aa21.13■□□□□ 0.97
RPL28-205ENST00000558131 RPS8P62241 208 aaKnown RBP21.13■□□□□ 0.97
RPL28-205ENST00000558131 TNIP1Q15025 636 aa21.13■□□□□ 0.97
RPL28-205ENST00000558131 CCDC27Q2M243 656 aa21.13■□□□□ 0.97
RPL28-205ENST00000558131 GLIS2Q9BZE0 524 aaPredicted RBP21.13■□□□□ 0.97
RPL28-205ENST00000558131 KCNQ5Q9NR82 932 aa21.13■□□□□ 0.97
RPL28-205ENST00000558131 PODXL2Q9NZ53 605 aa21.13■□□□□ 0.97
RPL28-205ENST00000558131 ZNF609O15014 1411 aa21.12■□□□□ 0.97
RPL28-205ENST00000558131 IGKV5-2P06315 115 aa21.12■□□□□ 0.97
RPL28-205ENST00000558131 MICALL2Q8IY33 904 aa21.12■□□□□ 0.97
RPL28-205ENST00000558131 JARID2Q92833 1246 aaPredicted RBP21.12■□□□□ 0.97
RPL28-205ENST00000558131 BCL2L13Q9BXK5 485 aa21.12■□□□□ 0.97
RPL28-205ENST00000558131 PRDM10Q9NQV6 1147 aa21.12■□□□□ 0.97
RPL28-205ENST00000558131 CNOT7Q9UIV1 285 aaKnown RBP21.12■□□□□ 0.97
RPL28-205ENST00000558131 RIMBP2O15034 1052 aa21.11■□□□□ 0.97
RPL28-205ENST00000558131 ECE2O60344 883 aa21.11■□□□□ 0.97
RPL28-205ENST00000558131 CAPN15O75808 1086 aa21.11■□□□□ 0.97
RPL28-205ENST00000558131 CCDC30Q5VVM6 783 aa21.11■□□□□ 0.97
RPL28-205ENST00000558131 CYP4F22Q6NT55 531 aa21.11■□□□□ 0.97
RPL28-205ENST00000558131 WWC1Q8IX03 1113 aa21.11■□□□□ 0.97
RPL28-205ENST00000558131 ZC3H15Q8WU90 426 aaKnown RBP21.11■□□□□ 0.97
RPL28-205ENST00000558131 DPF2Q92785 391 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms