RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 HSPA1AP0DMV8 641 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-204ENST00000558020 HSPA1BP0DMV9 641 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-204ENST00000558020 TNIP1Q15025 636 aa17.6■□□□□ 0.41
SNRPA1-204ENST00000558020 MAP1SQ66K74 1059 aaPredicted RBP17.6■□□□□ 0.41
SNRPA1-204ENST00000558020 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
SNRPA1-204ENST00000558020 SF3B3Q15393 1217 aaKnown RBP17.59■□□□□ 0.41
SNRPA1-204ENST00000558020 COL13A1Q5TAT6 717 aaPredicted RBP17.59■□□□□ 0.41
SNRPA1-204ENST00000558020 ELL2O00472 640 aaPredicted RBP17.58■□□□□ 0.4
SNRPA1-204ENST00000558020 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
SNRPA1-204ENST00000558020 EPS15P42566 896 aa17.58■□□□□ 0.4
SNRPA1-204ENST00000558020 SCNN1DP51172 638 aa17.58■□□□□ 0.4
SNRPA1-204ENST00000558020 CXCL9Q07325 125 aa17.58■□□□□ 0.4
SNRPA1-204ENST00000558020 KIAA2012Q0VF49 1180 aa17.58■□□□□ 0.4
SNRPA1-204ENST00000558020 CCDC30Q5VVM6 783 aa17.58■□□□□ 0.4
SNRPA1-204ENST00000558020 CNTNAP1P78357 1384 aa17.57■□□□□ 0.4
SNRPA1-204ENST00000558020 ADARB2Q9NS39 739 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-204ENST00000558020 GPRC5DQ9NZD1 345 aa17.57■□□□□ 0.4
SNRPA1-204ENST00000558020 IRS4O14654 1257 aaPredicted RBP17.56■□□□□ 0.4
SNRPA1-204ENST00000558020 DEFB115Q30KQ5 88 aa17.56■□□□□ 0.4
SNRPA1-204ENST00000558020 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
SNRPA1-204ENST00000558020 CIAPIN1Q6FI81 312 aa17.56■□□□□ 0.4
SNRPA1-204ENST00000558020 TNS4Q8IZW8 715 aa17.56■□□□□ 0.4
SNRPA1-204ENST00000558020 ZBTB38Q8NAP3 1195 aaPredicted RBP17.56■□□□□ 0.4
SNRPA1-204ENST00000558020 BCL2L13Q9BXK5 485 aa17.56■□□□□ 0.4
SNRPA1-204ENST00000558020 NSFL1CQ9UNZ2 370 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-204ENST00000558020 COL4A5P29400 1685 aa17.55■□□□□ 0.4
SNRPA1-204ENST00000558020 ZEB1P37275 1124 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-204ENST00000558020 WASHC4Q2M389 1173 aa17.55■□□□□ 0.4
SNRPA1-204ENST00000558020 CCDC191Q8NCU4 936 aa17.55■□□□□ 0.4
SNRPA1-204ENST00000558020 ZNF428Q96B54 188 aa17.55■□□□□ 0.4
SNRPA1-204ENST00000558020 AIDAQ96BJ3 306 aa17.55■□□□□ 0.4
SNRPA1-204ENST00000558020 ABT1Q9ULW3 272 aaKnown RBP17.55■□□□□ 0.4
SNRPA1-204ENST00000558020 CDHR2Q9BYE9 1310 aa17.54■□□□□ 0.4
SNRPA1-204ENST00000558020 RPS8P62241 208 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-204ENST00000558020 SLC51AQ86UW1 340 aa17.54■□□□□ 0.4
SNRPA1-204ENST00000558020 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
SNRPA1-204ENST00000558020 EYA3Q99504 573 aa17.54■□□□□ 0.4
SNRPA1-204ENST00000558020 PHAXQ9H814 394 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-204ENST00000558020 LAMB2P55268 1798 aa17.53■□□□□ 0.4
SNRPA1-204ENST00000558020 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
SNRPA1-204ENST00000558020 C6orf229H3BNL8 230 aa17.53■□□□□ 0.4
SNRPA1-204ENST00000558020 RAD17O75943 681 aa17.53■□□□□ 0.4
SNRPA1-204ENST00000558020 VEGFBP49765 207 aa17.53■□□□□ 0.4
SNRPA1-204ENST00000558020 GMPSP49915 693 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-204ENST00000558020 RASSF10A6NK89 507 aa17.52■□□□□ 0.4
SNRPA1-204ENST00000558020 H7C1D1 291 aa17.52■□□□□ 0.4
SNRPA1-204ENST00000558020 CCDC152Q4G0S7 254 aa17.52■□□□□ 0.4
SNRPA1-204ENST00000558020 ZC3H15Q8WU90 426 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-204ENST00000558020 CELF1Q92879 486 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-204ENST00000558020 MYD88Q99836 296 aa17.52■□□□□ 0.4
SNRPA1-204ENST00000558020 STK31Q9BXU1 1019 aa17.52■□□□□ 0.4
SNRPA1-204ENST00000558020 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-204ENST00000558020 PCCAP05165 728 aaPredicted RBP17.51■□□□□ 0.39
SNRPA1-204ENST00000558020 CCDC27Q2M243 656 aa17.51■□□□□ 0.39
SNRPA1-204ENST00000558020 METTL22Q9BUU2 404 aaPredicted RBP17.51■□□□□ 0.39
SNRPA1-204ENST00000558020 ZC3H12CQ9C0D7 883 aaKnown RBP17.51■□□□□ 0.39
SNRPA1-204ENST00000558020 G3V3G9 751 aa17.5■□□□□ 0.39
SNRPA1-204ENST00000558020 PDE8AO60658 829 aa17.5■□□□□ 0.39
SNRPA1-204ENST00000558020 ECE1P42892 770 aa17.5■□□□□ 0.39
SNRPA1-204ENST00000558020 MAP2K1Q02750 393 aaPredicted RBP17.5■□□□□ 0.39
SNRPA1-204ENST00000558020 NEXNQ0ZGT2 675 aa17.5■□□□□ 0.39
SNRPA1-204ENST00000558020 DCAF8Q5TAQ9 597 aa17.5■□□□□ 0.39
SNRPA1-204ENST00000558020 CNOT7Q9UIV1 285 aaKnown RBP17.5■□□□□ 0.39
SNRPA1-204ENST00000558020 RIMBP2O15034 1052 aa17.49■□□□□ 0.39
SNRPA1-204ENST00000558020 CTCFP49711 727 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-204ENST00000558020 GPSM2P81274 684 aa17.49■□□□□ 0.39
SNRPA1-204ENST00000558020 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
SNRPA1-204ENST00000558020 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
SNRPA1-204ENST00000558020 DPF2Q92785 391 aa17.49■□□□□ 0.39
SNRPA1-204ENST00000558020 ANKIB1Q9P2G1 1089 aa17.49■□□□□ 0.39
SNRPA1-204ENST00000558020 WDR33Q9C0J8 1336 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-204ENST00000558020 DDX60Q8IY21 1712 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-204ENST00000558020 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
SNRPA1-204ENST00000558020 POLLQ9UGP5 575 aa17.48■□□□□ 0.39
SNRPA1-204ENST00000558020 PGAP2Q9UHJ9 254 aa17.48■□□□□ 0.39
SNRPA1-204ENST00000558020 MAP3K2Q9Y2U5 619 aa17.48■□□□□ 0.39
SNRPA1-204ENST00000558020 TAF1P21675 1872 aa17.48■□□□□ 0.39
SNRPA1-204ENST00000558020 LTBP1Q14766 1721 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 YDJCA8MPS7 323 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 ANP32CO43423 234 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 RPS12P25398 132 aaKnown RBP17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 PAXIP1Q6ZW49 1069 aaPredicted RBP17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 CDC37L1Q7L3B6 337 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 TBC1D16Q8TBP0 767 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 BEGAINQ9BUH8 593 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 PRDM10Q9NQV6 1147 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 WBP1LQ9NX94 342 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 PODXL2Q9NZ53 605 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 IL16Q14005 1332 aa17.47■□□□□ 0.39
SNRPA1-204ENST00000558020 PI4KAP2A4QPH2 592 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 TRAF5O00463 557 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 FOXN1O15353 648 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 TWISTNBQ3B726 338 aaPredicted RBP17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 CST9Q5W186 159 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 MICALL2Q8IY33 904 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 TSPYL6Q8N831 410 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 PI4KAP1Q8N8J0 262 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 TSR2Q969E8 191 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 DBNDD1Q9H9R9 158 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms