RNA–Protein interactions for RNA: ENST00000557947.5

TCF12-208, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-208	ENST00000557947	MYD88	Q99836	296 aa		28.18	■■■□□ 2.1
TCF12-208	ENST00000557947	ADAMTSL1	Q8N6G6	1762 aa		28.18	■■■□□ 2.1
TCF12-208	ENST00000557947	LTBP1	Q14766	1721 aa		28.18	■■■□□ 2.1
TCF12-208	ENST00000557947	CELF1	Q92879	486 aa	Known RBP	28.17	■■■□□ 2.1
TCF12-208	ENST00000557947	VPS33B	Q9H267	617 aa		28.17	■■■□□ 2.1
TCF12-208	ENST00000557947	GJA3	Q9Y6H8	435 aa		28.17	■■■□□ 2.1
TCF12-208	ENST00000557947	IRS4	O14654	1257 aa	Predicted RBP	28.16	■■■□□ 2.1
TCF12-208	ENST00000557947	DPP8	Q6V1X1	898 aa	Predicted RBP	28.16	■■■□□ 2.1
TCF12-208	ENST00000557947	MPND	Q8N594	471 aa		28.16	■■■□□ 2.1
TCF12-208	ENST00000557947	TMX4	Q9H1E5	349 aa	Predicted RBP	28.16	■■■□□ 2.1
TCF12-208	ENST00000557947	IL16	Q14005	1332 aa		28.16	■■■□□ 2.1
TCF12-208	ENST00000557947	DUOX1	Q9NRD9	1551 aa		28.16	■■■□□ 2.1
TCF12-208	ENST00000557947	EAPP	Q56P03	285 aa	Predicted RBP	28.15	■■■□□ 2.1
TCF12-208	ENST00000557947	NIM1K	Q8IY84	436 aa		28.15	■■■□□ 2.1
TCF12-208	ENST00000557947	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.15	■■■□□ 2.1
TCF12-208	ENST00000557947	PASK	Q96RG2	1323 aa		28.15	■■■□□ 2.1
TCF12-208	ENST00000557947	LRRC37A	A6NMS7	1700 aa		28.15	■■■□□ 2.1
TCF12-208	ENST00000557947	SCNN1D	P51172	638 aa		28.14	■■■□□ 2.1
TCF12-208	ENST00000557947	SUPT20H	Q8NEM7	779 aa		28.14	■■■□□ 2.1
TCF12-208	ENST00000557947	METTL22	Q9BUU2	404 aa	Predicted RBP	28.14	■■■□□ 2.1
TCF12-208	ENST00000557947	ITGBL1	O95965	494 aa	Predicted RBP	28.13	■■■□□ 2.09
TCF12-208	ENST00000557947	CCDC191	Q8NCU4	936 aa		28.13	■■■□□ 2.09
TCF12-208	ENST00000557947	KIAA2012	Q0VF49	1180 aa		28.12	■■■□□ 2.09
TCF12-208	ENST00000557947	TMC4	Q7Z404	712 aa		28.12	■■■□□ 2.09
TCF12-208	ENST00000557947	JARID2	Q92833	1246 aa	Predicted RBP	28.12	■■■□□ 2.09
TCF12-208	ENST00000557947	CHMP4A	Q9BY43	222 aa		28.12	■■■□□ 2.09
TCF12-208	ENST00000557947	PCCA	P05165	728 aa	Predicted RBP	28.11	■■■□□ 2.09
TCF12-208	ENST00000557947	EPS15	P42566	896 aa		28.11	■■■□□ 2.09
TCF12-208	ENST00000557947	TWISTNB	Q3B726	338 aa	Predicted RBP	28.11	■■■□□ 2.09
TCF12-208	ENST00000557947	G2E3	Q7L622	706 aa		28.11	■■■□□ 2.09
TCF12-208	ENST00000557947	MAP3K2	Q9Y2U5	619 aa		28.11	■■■□□ 2.09
TCF12-208	ENST00000557947	DDX58	O95786	925 aa	Known RBP	28.1	■■■□□ 2.09
TCF12-208	ENST00000557947	CXCL9	Q07325	125 aa		28.1	■■■□□ 2.09
TCF12-208	ENST00000557947	PNMA8A	Q86V59	439 aa	Predicted RBP	28.1	■■■□□ 2.09
TCF12-208	ENST00000557947	ZNRF3	Q9ULT6	936 aa		28.1	■■■□□ 2.09
TCF12-208	ENST00000557947	SALL2	Q9Y467	1007 aa	Predicted RBP	28.1	■■■□□ 2.09
TCF12-208	ENST00000557947	PI4KAP2	A4QPH2	592 aa		28.09	■■■□□ 2.09
TCF12-208	ENST00000557947	IGKV5-2	P06315	115 aa		28.09	■■■□□ 2.09
TCF12-208	ENST00000557947	KSR2	Q6VAB6	950 aa		28.09	■■■□□ 2.09
TCF12-208	ENST00000557947	PI4KAP1	Q8N8J0	262 aa		28.09	■■■□□ 2.09
TCF12-208	ENST00000557947	CREBZF	Q9NS37	354 aa		28.09	■■■□□ 2.09
TCF12-208	ENST00000557947	CWC25	Q9NXE8	425 aa	Predicted RBP	28.09	■■■□□ 2.09
TCF12-208	ENST00000557947	CLEC11A	Q9Y240	323 aa		28.09	■■■□□ 2.09
TCF12-208	ENST00000557947	FANCI	Q9NVI1	1328 aa		28.09	■■■□□ 2.09
TCF12-208	ENST00000557947	SEC31B	Q9NQW1	1179 aa		28.08	■■■□□ 2.09
TCF12-208	ENST00000557947	MAP1S	Q66K74	1059 aa	Predicted RBP	28.07	■■■□□ 2.08
TCF12-208	ENST00000557947	PCNT	O95613	3336 aa		28.07	■■■□□ 2.08
TCF12-208	ENST00000557947	YDJC	A8MPS7	323 aa		28.06	■■■□□ 2.08
TCF12-208	ENST00000557947	RPS8	P62241	208 aa	Known RBP	28.06	■■■□□ 2.08
TCF12-208	ENST00000557947	GPSM2	P81274	684 aa		28.06	■■■□□ 2.08
TCF12-208	ENST00000557947	WDR63	Q8IWG1	891 aa		28.06	■■■□□ 2.08
TCF12-208	ENST00000557947	STK31	Q9BXU1	1019 aa		28.06	■■■□□ 2.08
TCF12-208	ENST00000557947	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.06	■■■□□ 2.08
TCF12-208	ENST00000557947	LMOD1	P29536	600 aa	Predicted RBP	28.05	■■■□□ 2.08
TCF12-208	ENST00000557947	CNTROB	Q8N137	903 aa		28.05	■■■□□ 2.08
TCF12-208	ENST00000557947	POLL	Q9UGP5	575 aa		28.05	■■■□□ 2.08
TCF12-208	ENST00000557947	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.05	■■■□□ 2.08
TCF12-208	ENST00000557947	PDE8A	O60658	829 aa		28.04	■■■□□ 2.08
TCF12-208	ENST00000557947	SLC4A2	P04920	1241 aa		28.04	■■■□□ 2.08
TCF12-208	ENST00000557947	GPRC5D	Q9NZD1	345 aa		28.04	■■■□□ 2.08
TCF12-208	ENST00000557947	RAD17	O75943	681 aa		28.03	■■■□□ 2.08
TCF12-208	ENST00000557947	CDHR2	Q9BYE9	1310 aa		28.02	■■■□□ 2.08
TCF12-208	ENST00000557947	VAMP4	O75379	141 aa		28.02	■■■□□ 2.08
TCF12-208	ENST00000557947	GMPS	P49915	693 aa	Predicted RBP	28.02	■■■□□ 2.08
TCF12-208	ENST00000557947	CWF19L2	Q2TBE0	894 aa	Known RBP	28.02	■■■□□ 2.08
TCF12-208	ENST00000557947	CIAPIN1	Q6FI81	312 aa		28.02	■■■□□ 2.08
TCF12-208	ENST00000557947	FAM9B	Q8IZU0	186 aa		28.02	■■■□□ 2.08
TCF12-208	ENST00000557947	HSP90B1	P14625	803 aa	Known RBP	28.01	■■■□□ 2.07
TCF12-208	ENST00000557947	EXOSC9	Q06265	439 aa	Known RBP	28.01	■■■□□ 2.07
TCF12-208	ENST00000557947	CCDC85A	Q96PX6	553 aa	Predicted RBP	28.01	■■■□□ 2.07
TCF12-208	ENST00000557947	MKRN1	Q9UHC7	482 aa	Known RBP	28.01	■■■□□ 2.07
TCF12-208	ENST00000557947	NEURL1B	A8MQ27	555 aa		28	■■■□□ 2.07
TCF12-208	ENST00000557947	WASHC4	Q2M389	1173 aa		28	■■■□□ 2.07
TCF12-208	ENST00000557947	CCDC152	Q4G0S7	254 aa		28	■■■□□ 2.07
TCF12-208	ENST00000557947	USP50	Q70EL3	339 aa	Predicted RBP	28	■■■□□ 2.07
TCF12-208	ENST00000557947	GPR101	Q96P66	508 aa	Predicted RBP	28	■■■□□ 2.07
TCF12-208	ENST00000557947	TMEM88B	A6NKF7	163 aa		27.99	■■■□□ 2.07
TCF12-208	ENST00000557947	C6orf229	H3BNL8	230 aa		27.99	■■■□□ 2.07
TCF12-208	ENST00000557947	RIMBP2	O15034	1052 aa		27.99	■■■□□ 2.07
TCF12-208	ENST00000557947	FMR1	Q06787	632 aa	Known RBP eCLIP	27.99	■■■□□ 2.07
TCF12-208	ENST00000557947	FLII	Q13045	1269 aa		27.99	■■■□□ 2.07
TCF12-208	ENST00000557947	TBC1D16	Q8TBP0	767 aa		27.99	■■■□□ 2.07
TCF12-208	ENST00000557947	DBNDD1	Q9H9R9	158 aa		27.98	■■■□□ 2.07
TCF12-208	ENST00000557947	ADARB2	Q9NS39	739 aa	Known RBP	27.98	■■■□□ 2.07
TCF12-208	ENST00000557947	PODXL2	Q9NZ53	605 aa		27.98	■■■□□ 2.07
TCF12-208	ENST00000557947	CNTNAP1	P78357	1384 aa		27.98	■■■□□ 2.07
TCF12-208	ENST00000557947	NEXN	Q0ZGT2	675 aa		27.97	■■■□□ 2.07
TCF12-208	ENST00000557947	TNIP1	Q15025	636 aa		27.97	■■■□□ 2.07
TCF12-208	ENST00000557947	IFFO2	Q5TF58	517 aa		27.97	■■■□□ 2.07
TCF12-208	ENST00000557947	SHTN1	A0MZ66	631 aa		27.96	■■■□□ 2.07
TCF12-208	ENST00000557947		H7C1W4	665 aa		27.96	■■■□□ 2.07
TCF12-208	ENST00000557947	CTSW	P56202	376 aa		27.96	■■■□□ 2.07
TCF12-208	ENST00000557947	TTLL11	Q8NHH1	800 aa		27.96	■■■□□ 2.07
TCF12-208	ENST00000557947	KCNQ5	Q9NR82	932 aa		27.96	■■■□□ 2.07
TCF12-208	ENST00000557947	DOK7	Q18PE1	504 aa		27.95	■■■□□ 2.06
TCF12-208	ENST00000557947	HIRA	P54198	1017 aa	Predicted RBP	27.94	■■■□□ 2.06
TCF12-208	ENST00000557947	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.94	■■■□□ 2.06
TCF12-208	ENST00000557947	PSMD14	O00487	310 aa		27.93	■■■□□ 2.06
TCF12-208	ENST00000557947	HSPA1A	P0DMV8	641 aa	Known RBP	27.93	■■■□□ 2.06
TCF12-208	ENST00000557947	HSPA1B	P0DMV9	641 aa	Known RBP	27.93	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms