RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 KIAA2012Q0VF49 1180 aa29.83■■■□□ 2.37
RIPK3-207ENST00000557662 MAP1SQ66K74 1059 aaPredicted RBP29.83■■■□□ 2.37
RIPK3-207ENST00000557662 CNTROBQ8N137 903 aa29.83■■■□□ 2.37
RIPK3-207ENST00000557662 SUPT20HQ8NEM7 779 aa29.83■■■□□ 2.37
RIPK3-207ENST00000557662 MKRN1Q9UHC7 482 aaKnown RBP29.83■■■□□ 2.37
RIPK3-207ENST00000557662 TMEM88BA6NKF7 163 aa29.82■■■□□ 2.36
RIPK3-207ENST00000557662 ATP5J2-PTCD1G3V325 749 aa29.82■■■□□ 2.36
RIPK3-207ENST00000557662 CALD1Q05682 793 aaKnown RBP29.82■■■□□ 2.36
RIPK3-207ENST00000557662 TMC4Q7Z404 712 aa29.82■■■□□ 2.36
RIPK3-207ENST00000557662 FAM89AQ96GI7 184 aa29.82■■■□□ 2.36
RIPK3-207ENST00000557662 THSD7BQ9C0I4 1608 aa29.82■■■□□ 2.36
RIPK3-207ENST00000557662 CXCL9Q07325 125 aa29.81■■■□□ 2.36
RIPK3-207ENST00000557662 DPP8Q6V1X1 898 aaPredicted RBP29.81■■■□□ 2.36
RIPK3-207ENST00000557662 MPNDQ8N594 471 aa29.81■■■□□ 2.36
RIPK3-207ENST00000557662 ZNRF3Q9ULT6 936 aa29.81■■■□□ 2.36
RIPK3-207ENST00000557662 MYH3P11055 1940 aa29.81■■■□□ 2.36
RIPK3-207ENST00000557662 CCDC184Q52MB2 194 aa29.8■■■□□ 2.36
RIPK3-207ENST00000557662 ZNF428Q96B54 188 aa29.8■■■□□ 2.36
RIPK3-207ENST00000557662 TMX4Q9H1E5 349 aaPredicted RBP29.8■■■□□ 2.36
RIPK3-207ENST00000557662 PHAXQ9H814 394 aaKnown RBP29.8■■■□□ 2.36
RIPK3-207ENST00000557662 CLEC11AQ9Y240 323 aa29.8■■■□□ 2.36
RIPK3-207ENST00000557662 CACNA1FO60840 1977 aa29.79■■■□□ 2.36
RIPK3-207ENST00000557662 LMOD1P29536 600 aaPredicted RBP29.79■■■□□ 2.36
RIPK3-207ENST00000557662 C8orf58Q8NAV2 365 aa29.79■■■□□ 2.36
RIPK3-207ENST00000557662 USP50Q70EL3 339 aaPredicted RBP29.78■■■□□ 2.36
RIPK3-207ENST00000557662 GPRC5DQ9NZD1 345 aa29.78■■■□□ 2.36
RIPK3-207ENST00000557662 PSME4Q14997 1843 aa29.78■■■□□ 2.36
RIPK3-207ENST00000557662 SCN9AQ15858 1988 aa29.77■■■□□ 2.36
RIPK3-207ENST00000557662 CELF1Q92879 486 aaKnown RBP29.77■■■□□ 2.36
RIPK3-207ENST00000557662 CDHR2Q9BYE9 1310 aa29.76■■■□□ 2.36
RIPK3-207ENST00000557662 RASSF10A6NK89 507 aa29.76■■■□□ 2.35
RIPK3-207ENST00000557662 YDJCA8MPS7 323 aa29.75■■■□□ 2.35
RIPK3-207ENST00000557662 ELL2O00472 640 aaPredicted RBP29.74■■■□□ 2.35
RIPK3-207ENST00000557662 CCDC27Q2M243 656 aa29.74■■■□□ 2.35
RIPK3-207ENST00000557662 ZBTB38Q8NAP3 1195 aaPredicted RBP29.74■■■□□ 2.35
RIPK3-207ENST00000557662 IRS4O14654 1257 aaPredicted RBP29.73■■■□□ 2.35
RIPK3-207ENST00000557662 VEGFBP49765 207 aa29.73■■■□□ 2.35
RIPK3-207ENST00000557662 GOLGA2Q08379 1002 aa29.73■■■□□ 2.35
RIPK3-207ENST00000557662 ADARB2Q9NS39 739 aaKnown RBP29.73■■■□□ 2.35
RIPK3-207ENST00000557662 CIAPIN1Q6FI81 312 aa29.72■■■□□ 2.35
RIPK3-207ENST00000557662 RIC3Q7Z5B4 369 aa29.72■■■□□ 2.35
RIPK3-207ENST00000557662 TSPYL6Q8N831 410 aa29.72■■■□□ 2.35
RIPK3-207ENST00000557662 POLR2AP24928 1970 aaKnown RBP29.72■■■□□ 2.35
RIPK3-207ENST00000557662 GMPSP49915 693 aaPredicted RBP29.71■■■□□ 2.35
RIPK3-207ENST00000557662 CCDC191Q8NCU4 936 aa29.71■■■□□ 2.35
RIPK3-207ENST00000557662 FMR1Q06787 632 aaKnown RBP eCLIP29.7■■■□□ 2.35
RIPK3-207ENST00000557662 RTL5Q5HYW3 569 aaPredicted RBP29.7■■■□□ 2.35
RIPK3-207ENST00000557662 PGAP2Q9UHJ9 254 aa29.7■■■□□ 2.35
RIPK3-207ENST00000557662 PCCAP05165 728 aaPredicted RBP29.69■■■□□ 2.34
RIPK3-207ENST00000557662 NCBP3Q53F19 620 aaKnown RBP29.69■■■□□ 2.34
RIPK3-207ENST00000557662 MYD88Q99836 296 aa29.69■■■□□ 2.34
RIPK3-207ENST00000557662 METTL22Q9BUU2 404 aaPredicted RBP29.69■■■□□ 2.34
RIPK3-207ENST00000557662 POLLQ9UGP5 575 aa29.69■■■□□ 2.34
RIPK3-207ENST00000557662 SPEF2Q9C093 1822 aa29.68■■■□□ 2.34
RIPK3-207ENST00000557662 CCDC30Q5VVM6 783 aa29.68■■■□□ 2.34
RIPK3-207ENST00000557662 RAD17O75943 681 aa29.67■■■□□ 2.34
RIPK3-207ENST00000557662 GPSM2P81274 684 aa29.67■■■□□ 2.34
RIPK3-207ENST00000557662 WWC1Q8IX03 1113 aa29.67■■■□□ 2.34
RIPK3-207ENST00000557662 ZNF646O15015 1829 aaPredicted RBP29.66■■■□□ 2.34
RIPK3-207ENST00000557662 RPS8P62241 208 aaKnown RBP29.66■■■□□ 2.34
RIPK3-207ENST00000557662 TNIP1Q15025 636 aa29.66■■■□□ 2.34
RIPK3-207ENST00000557662 CST9Q5W186 159 aa29.66■■■□□ 2.34
RIPK3-207ENST00000557662 TSR2Q969E8 191 aaKnown RBP29.66■■■□□ 2.34
RIPK3-207ENST00000557662 CHMP4AQ9BY43 222 aa29.66■■■□□ 2.34
RIPK3-207ENST00000557662 PODXL2Q9NZ53 605 aa29.66■■■□□ 2.34
RIPK3-207ENST00000557662 NSFL1CQ9UNZ2 370 aaKnown RBP29.66■■■□□ 2.34
RIPK3-207ENST00000557662 FOXN1O15353 648 aa29.65■■■□□ 2.34
RIPK3-207ENST00000557662 HIRAP54198 1017 aaPredicted RBP29.65■■■□□ 2.34
RIPK3-207ENST00000557662 DEFB115Q30KQ5 88 aa29.65■■■□□ 2.34
RIPK3-207ENST00000557662 TRAF5O00463 557 aa29.64■■■□□ 2.34
RIPK3-207ENST00000557662 WASHC4Q2M389 1173 aa29.64■■■□□ 2.34
RIPK3-207ENST00000557662 SEC31BQ9NQW1 1179 aa29.64■■■□□ 2.34
RIPK3-207ENST00000557662 WBP1LQ9NX94 342 aa29.64■■■□□ 2.34
RIPK3-207ENST00000557662 CWC25Q9NXE8 425 aaPredicted RBP29.64■■■□□ 2.34
RIPK3-207ENST00000557662 IL16Q14005 1332 aa29.64■■■□□ 2.34
RIPK3-207ENST00000557662 TNS4Q8IZW8 715 aa29.63■■■□□ 2.33
RIPK3-207ENST00000557662 TBC1D16Q8TBP0 767 aa29.63■■■□□ 2.33
RIPK3-207ENST00000557662 ZC3H15Q8WU90 426 aaKnown RBP29.63■■■□□ 2.33
RIPK3-207ENST00000557662 RTL9Q8NET4 1388 aa29.63■■■□□ 2.33
RIPK3-207ENST00000557662 SHTN1A0MZ66 631 aa29.62■■■□□ 2.33
RIPK3-207ENST00000557662 PDE8AO60658 829 aa29.62■■■□□ 2.33
RIPK3-207ENST00000557662 DDX58O95786 925 aaKnown RBP29.62■■■□□ 2.33
RIPK3-207ENST00000557662 IGKV5-2P06315 115 aa29.62■■■□□ 2.33
RIPK3-207ENST00000557662 HSP90B1P14625 803 aaKnown RBP29.62■■■□□ 2.33
RIPK3-207ENST00000557662 TRPM4Q8TD43 1214 aa29.62■■■□□ 2.33
RIPK3-207ENST00000557662 DPF2Q92785 391 aa29.62■■■□□ 2.33
RIPK3-207ENST00000557662 ZNF609O15014 1411 aa29.62■■■□□ 2.33
RIPK3-207ENST00000557662 KSR2Q6VAB6 950 aa29.61■■■□□ 2.33
RIPK3-207ENST00000557662 DBNDD1Q9H9R9 158 aa29.61■■■□□ 2.33
RIPK3-207ENST00000557662 MAP3K2Q9Y2U5 619 aa29.61■■■□□ 2.33
RIPK3-207ENST00000557662 WDR33Q9C0J8 1336 aaKnown RBP29.61■■■□□ 2.33
RIPK3-207ENST00000557662 PSMD14O00487 310 aa29.6■■■□□ 2.33
RIPK3-207ENST00000557662 CNOT7Q9UIV1 285 aaKnown RBP29.6■■■□□ 2.33
RIPK3-207ENST00000557662 TLL2Q9Y6L7 1015 aa29.6■■■□□ 2.33
RIPK3-207ENST00000557662 PI4KAP2A4QPH2 592 aa29.59■■■□□ 2.33
RIPK3-207ENST00000557662 CCDC152Q4G0S7 254 aa29.59■■■□□ 2.33
RIPK3-207ENST00000557662 PI4KAP1Q8N8J0 262 aa29.59■■■□□ 2.33
RIPK3-207ENST00000557662 BCL2L13Q9BXK5 485 aa29.59■■■□□ 2.33
RIPK3-207ENST00000557662 ABT1Q9ULW3 272 aaKnown RBP29.59■■■□□ 2.33
RIPK3-207ENST00000557662 JARID2Q92833 1246 aaPredicted RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms