RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PLCB1Q9NQ66 1216 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 EXOC1Q9NV70 894 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 POTEB3A0JP26 581 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 POTEBQ6S5H4 581 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 CCDC170Q8IYT3 715 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 DDX27Q96GQ7 796 aaKnown RBP10.01□□□□□ -0.81
SYNE3-205ENST00000557275 BICDL2A1A5D9 508 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 CRCPO75575 148 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 GLRX3O76003 335 aaKnown RBP10.01□□□□□ -0.81
SYNE3-205ENST00000557275 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 GBP5Q96PP8 586 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 MYO9BQ13459 2157 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 AP1ARQ63HQ0 302 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 CHD1LQ86WJ1 897 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 RUFY4Q6ZNE9 571 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 CCDC124Q96CT7 223 aaKnown RBP10□□□□□ -0.81
SYNE3-205ENST00000557275 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
SYNE3-205ENST00000557275 DAPK1P53355 1430 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 IBSPP21815 317 aaPredicted RBP10□□□□□ -0.81
SYNE3-205ENST00000557275 SLC8A1P32418 973 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 RAD50Q92878 1312 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 PPP1R2P41236 205 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 PFDN4Q9NQP4 134 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 HMG20BQ9P0W2 317 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 B4DLN1 442 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 I3L4J1 428 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 INPP1P49441 399 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 MRPL12P52815 198 aaKnown RBP10□□□□□ -0.81
SYNE3-205ENST00000557275 CCDC117Q8IWD4 279 aaPredicted RBP10□□□□□ -0.81
SYNE3-205ENST00000557275 GIMAP4Q9NUV9 329 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 CATIPQ7Z7H3 387 aa10□□□□□ -0.81
SYNE3-205ENST00000557275 CLNS1AP54105 237 aaKnown RBP10□□□□□ -0.81
SYNE3-205ENST00000557275 TBCAO75347 108 aaKnown RBP10□□□□□ -0.81
SYNE3-205ENST00000557275 STK10O94804 968 aaKnown RBP10□□□□□ -0.81
SYNE3-205ENST00000557275 NCBP1Q09161 790 aaKnown RBP10□□□□□ -0.81
SYNE3-205ENST00000557275 RBM27Q9P2N5 1060 aaKnown RBP9.99□□□□□ -0.81
SYNE3-205ENST00000557275 ZNF652Q9Y2D9 606 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 NBPF8Q3BBV2 869 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 CCDC102BQ68D86 513 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 LGSNQ5TDP6 509 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 SLC12A7Q9Y666 1083 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 TMC6Q7Z403 805 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 TRAK1Q9UPV9 953 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 FAM169AQ9Y6X4 670 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 ZNF165P49910 485 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 LIMCH1Q9UPQ0 1083 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 KRT13P13646 458 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 PSPC1Q8WXF1 523 aaKnown RBP9.99□□□□□ -0.81
SYNE3-205ENST00000557275 GKAP1Q5VSY0 366 aaPredicted RBP9.99□□□□□ -0.81
SYNE3-205ENST00000557275 OGFRQ9NZT2 677 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 LRP2BPQ9P2M1 347 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 STK3Q13188 491 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 SMAP1Q8IYB5 467 aaPredicted RBP9.99□□□□□ -0.81
SYNE3-205ENST00000557275 UBA5Q9GZZ9 404 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 MUM1L1Q5H9M0 696 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 RUFY3Q7L099 469 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 KCNG4Q8TDN1 519 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 PANK1Q8TE04 598 aa9.99□□□□□ -0.81
SYNE3-205ENST00000557275 MYOM3Q5VTT5 1437 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 ADCY5O95622 1261 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 ATP6V0A2Q9Y487 856 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 NBPF7P0C2Y1 421 aaPredicted RBP9.98□□□□□ -0.81
SYNE3-205ENST00000557275 ERCC5P28715 1186 aaPredicted RBP9.98□□□□□ -0.81
SYNE3-205ENST00000557275 MAP2K2P36507 400 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
SYNE3-205ENST00000557275 CEP126Q9P2H0 1117 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 SOGA1O94964 1423 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 UBA7P41226 1012 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 TTF1Q15361 905 aaPredicted RBP9.98□□□□□ -0.81
SYNE3-205ENST00000557275 RBM26Q5T8P6 1007 aaKnown RBP9.98□□□□□ -0.81
SYNE3-205ENST00000557275 RAB11FIP4Q86YS3 637 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 TERF1P54274 439 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 CUL4BQ13620 913 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 PPP2R5EQ16537 467 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 SDCCAG3Q96C92 435 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 EVI5O60447 810 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 RPAP2Q8IXW5 612 aaPredicted RBP9.98□□□□□ -0.81
SYNE3-205ENST00000557275 ZHX1Q9UKY1 873 aaPredicted RBP9.98□□□□□ -0.81
SYNE3-205ENST00000557275 PSMA7O14818 248 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 GEN1Q17RS7 908 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 TCERG1LQ5VWI1 586 aa9.98□□□□□ -0.81
SYNE3-205ENST00000557275 GABPB1Q06547 395 aaPredicted RBP9.97□□□□□ -0.81
SYNE3-205ENST00000557275 CCDC65Q8IXS2 484 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 ZMYND15Q9H091 742 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 CHMP2AO43633 222 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 SSRP1Q08945 709 aaKnown RBP9.97□□□□□ -0.81
SYNE3-205ENST00000557275 GOLGA8AA7E2F4 631 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 GOLGA8BA8MQT2 603 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 FCHSD2O94868 740 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 PRDM10Q9NQV6 1147 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 MYCBPQ99417 103 aaPredicted RBP9.97□□□□□ -0.81
SYNE3-205ENST00000557275 RBM5P52756 815 aaKnown RBP eCLIP9.97□□□□□ -0.81
SYNE3-205ENST00000557275 NAPBQ9H115 298 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 AACSQ86V21 672 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 SKILP12757 684 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 INPP5BP32019 993 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 AMOTQ4VCS5 1084 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 CAVIN4Q5BKX8 364 aa9.97□□□□□ -0.81
SYNE3-205ENST00000557275 NRBF2Q96F24 287 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms