RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SCNN1DP51172 638 aa20.6■□□□□ 0.89
TUBB3-213ENST00000557262 TRIM28Q13263 835 aaKnown RBP20.6■□□□□ 0.89
TUBB3-213ENST00000557262 TMC4Q7Z404 712 aa20.6■□□□□ 0.89
TUBB3-213ENST00000557262 FAM89AQ96GI7 184 aa20.6■□□□□ 0.89
TUBB3-213ENST00000557262 ZNRF3Q9ULT6 936 aa20.6■□□□□ 0.89
TUBB3-213ENST00000557262 ELL2O00472 640 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-213ENST00000557262 SF3B3Q15393 1217 aaKnown RBP20.59■□□□□ 0.89
TUBB3-213ENST00000557262 CXCL9Q07325 125 aa20.58■□□□□ 0.89
TUBB3-213ENST00000557262 USP50Q70EL3 339 aaPredicted RBP20.58■□□□□ 0.89
TUBB3-213ENST00000557262 RIC3Q7Z5B4 369 aa20.58■□□□□ 0.89
TUBB3-213ENST00000557262 CNTNAP1P78357 1384 aa20.58■□□□□ 0.88
TUBB3-213ENST00000557262 ADAMTSL1Q8N6G6 1762 aa20.57■□□□□ 0.88
TUBB3-213ENST00000557262 KIAA2012Q0VF49 1180 aa20.57■□□□□ 0.88
TUBB3-213ENST00000557262 PHAXQ9H814 394 aaKnown RBP20.57■□□□□ 0.88
TUBB3-213ENST00000557262 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
TUBB3-213ENST00000557262 CHMP4AQ9BY43 222 aa20.56■□□□□ 0.88
TUBB3-213ENST00000557262 LAMB2P55268 1798 aa20.56■□□□□ 0.88
TUBB3-213ENST00000557262 IRS4O14654 1257 aaPredicted RBP20.55■□□□□ 0.88
TUBB3-213ENST00000557262 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
TUBB3-213ENST00000557262 CIAPIN1Q6FI81 312 aa20.55■□□□□ 0.88
TUBB3-213ENST00000557262 C8orf58Q8NAV2 365 aa20.55■□□□□ 0.88
TUBB3-213ENST00000557262 GPRC5DQ9NZD1 345 aa20.55■□□□□ 0.88
TUBB3-213ENST00000557262 VEGFBP49765 207 aa20.54■□□□□ 0.88
TUBB3-213ENST00000557262 TNIP1Q15025 636 aa20.54■□□□□ 0.88
TUBB3-213ENST00000557262 CELF1Q92879 486 aaKnown RBP20.54■□□□□ 0.88
TUBB3-213ENST00000557262 ADARB2Q9NS39 739 aaKnown RBP20.54■□□□□ 0.88
TUBB3-213ENST00000557262 DEFB115Q30KQ5 88 aa20.53■□□□□ 0.88
TUBB3-213ENST00000557262 CCDC30Q5VVM6 783 aa20.53■□□□□ 0.88
TUBB3-213ENST00000557262 ZBTB38Q8NAP3 1195 aaPredicted RBP20.53■□□□□ 0.88
TUBB3-213ENST00000557262 NSFL1CQ9UNZ2 370 aaKnown RBP20.53■□□□□ 0.88
TUBB3-213ENST00000557262 LTBP1Q14766 1721 aa20.53■□□□□ 0.88
TUBB3-213ENST00000557262 HSP90B1P14625 803 aaKnown RBP20.52■□□□□ 0.88
TUBB3-213ENST00000557262 GMPSP49915 693 aaPredicted RBP20.52■□□□□ 0.88
TUBB3-213ENST00000557262 CCDC184Q52MB2 194 aa20.52■□□□□ 0.88
TUBB3-213ENST00000557262 TNS4Q8IZW8 715 aa20.52■□□□□ 0.88
TUBB3-213ENST00000557262 MYD88Q99836 296 aa20.52■□□□□ 0.88
TUBB3-213ENST00000557262 RASSF10A6NK89 507 aa20.51■□□□□ 0.87
TUBB3-213ENST00000557262 RAD17O75943 681 aa20.51■□□□□ 0.87
TUBB3-213ENST00000557262 RPS8P62241 208 aaKnown RBP20.51■□□□□ 0.87
TUBB3-213ENST00000557262 WASHC4Q2M389 1173 aa20.51■□□□□ 0.87
TUBB3-213ENST00000557262 CCDC191Q8NCU4 936 aa20.51■□□□□ 0.87
TUBB3-213ENST00000557262 BCL2L13Q9BXK5 485 aa20.51■□□□□ 0.87
TUBB3-213ENST00000557262 TAF1P21675 1872 aa20.51■□□□□ 0.87
TUBB3-213ENST00000557262 DDX58O95786 925 aaKnown RBP20.5■□□□□ 0.87
TUBB3-213ENST00000557262 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
TUBB3-213ENST00000557262 YDJCA8MPS7 323 aa20.49■□□□□ 0.87
TUBB3-213ENST00000557262 PCCAP05165 728 aaPredicted RBP20.49■□□□□ 0.87
TUBB3-213ENST00000557262 CCDC27Q2M243 656 aa20.49■□□□□ 0.87
TUBB3-213ENST00000557262 TSPYL6Q8N831 410 aa20.49■□□□□ 0.87
TUBB3-213ENST00000557262 METTL22Q9BUU2 404 aaPredicted RBP20.49■□□□□ 0.87
TUBB3-213ENST00000557262 ABT1Q9ULW3 272 aaKnown RBP20.49■□□□□ 0.87
TUBB3-213ENST00000557262 CDHR2Q9BYE9 1310 aa20.49■□□□□ 0.87
TUBB3-213ENST00000557262 C6orf229H3BNL8 230 aa20.48■□□□□ 0.87
TUBB3-213ENST00000557262 GPSM2P81274 684 aa20.48■□□□□ 0.87
TUBB3-213ENST00000557262 FMR1Q06787 632 aaKnown RBP eCLIP20.48■□□□□ 0.87
TUBB3-213ENST00000557262 CWC25Q9NXE8 425 aaPredicted RBP20.48■□□□□ 0.87
TUBB3-213ENST00000557262 POLLQ9UGP5 575 aa20.48■□□□□ 0.87
TUBB3-213ENST00000557262 PGAP2Q9UHJ9 254 aa20.48■□□□□ 0.87
TUBB3-213ENST00000557262 CNOT7Q9UIV1 285 aaKnown RBP20.48■□□□□ 0.87
TUBB3-213ENST00000557262 RIMBP2O15034 1052 aa20.47■□□□□ 0.87
TUBB3-213ENST00000557262 PDE8AO60658 829 aa20.47■□□□□ 0.87
TUBB3-213ENST00000557262 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
TUBB3-213ENST00000557262 EYA3Q99504 573 aa20.47■□□□□ 0.87
TUBB3-213ENST00000557262 SEC31BQ9NQW1 1179 aa20.47■□□□□ 0.87
TUBB3-213ENST00000557262 H7C1D1 291 aa20.46■□□□□ 0.87
TUBB3-213ENST00000557262 TRAF5O00463 557 aa20.46■□□□□ 0.87
TUBB3-213ENST00000557262 FOXN1O15353 648 aa20.46■□□□□ 0.87
TUBB3-213ENST00000557262 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
TUBB3-213ENST00000557262 CST9Q5W186 159 aa20.46■□□□□ 0.87
TUBB3-213ENST00000557262 ZC3H15Q8WU90 426 aaKnown RBP20.46■□□□□ 0.87
TUBB3-213ENST00000557262 AIDAQ96BJ3 306 aa20.46■□□□□ 0.87
TUBB3-213ENST00000557262 MAP3K2Q9Y2U5 619 aa20.46■□□□□ 0.87
TUBB3-213ENST00000557262 WDR33Q9C0J8 1336 aaKnown RBP20.46■□□□□ 0.87
TUBB3-213ENST00000557262 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
TUBB3-213ENST00000557262 HIRAP54198 1017 aaPredicted RBP20.45■□□□□ 0.86
TUBB3-213ENST00000557262 KSR2Q6VAB6 950 aa20.45■□□□□ 0.86
TUBB3-213ENST00000557262 TBC1D16Q8TBP0 767 aa20.45■□□□□ 0.86
TUBB3-213ENST00000557262 DPF2Q92785 391 aa20.45■□□□□ 0.86
TUBB3-213ENST00000557262 JARID2Q92833 1246 aaPredicted RBP20.45■□□□□ 0.86
TUBB3-213ENST00000557262 TSR2Q969E8 191 aaKnown RBP20.45■□□□□ 0.86
TUBB3-213ENST00000557262 STK31Q9BXU1 1019 aa20.45■□□□□ 0.86
TUBB3-213ENST00000557262 DBNDD1Q9H9R9 158 aa20.45■□□□□ 0.86
TUBB3-213ENST00000557262 WBP1LQ9NX94 342 aa20.45■□□□□ 0.86
TUBB3-213ENST00000557262 DUOX1Q9NRD9 1551 aa20.45■□□□□ 0.86
TUBB3-213ENST00000557262 LRRC37AA6NMS7 1700 aa20.44■□□□□ 0.86
TUBB3-213ENST00000557262 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
TUBB3-213ENST00000557262 ZC3H12CQ9C0D7 883 aaKnown RBP20.44■□□□□ 0.86
TUBB3-213ENST00000557262 PODXL2Q9NZ53 605 aa20.44■□□□□ 0.86
TUBB3-213ENST00000557262 PI4KAP2A4QPH2 592 aa20.43■□□□□ 0.86
TUBB3-213ENST00000557262 PSMD14O00487 310 aa20.43■□□□□ 0.86
TUBB3-213ENST00000557262 CTCFP49711 727 aaPredicted RBP20.43■□□□□ 0.86
TUBB3-213ENST00000557262 DOK7Q18PE1 504 aa20.43■□□□□ 0.86
TUBB3-213ENST00000557262 PI4KAP1Q8N8J0 262 aa20.43■□□□□ 0.86
TUBB3-213ENST00000557262 ANKIB1Q9P2G1 1089 aa20.43■□□□□ 0.86
TUBB3-213ENST00000557262 ZBTB12Q9Y330 459 aaPredicted RBP20.43■□□□□ 0.86
TUBB3-213ENST00000557262 ECE2O60344 883 aa20.42■□□□□ 0.86
TUBB3-213ENST00000557262 CAPN15O75808 1086 aa20.42■□□□□ 0.86
TUBB3-213ENST00000557262 ECE1P42892 770 aa20.42■□□□□ 0.86
TUBB3-213ENST00000557262 MAP2K1Q02750 393 aaPredicted RBP20.42■□□□□ 0.86
TUBB3-213ENST00000557262 TWISTNBQ3B726 338 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms