RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 GPRC5DQ9NZD1 345 aa18.83■□□□□ 0.6
VRTN-202ENST00000557177 KIAA2012Q0VF49 1180 aa18.82■□□□□ 0.6
VRTN-202ENST00000557177 WDR43Q15061 677 aaKnown RBP eCLIP18.82■□□□□ 0.6
VRTN-202ENST00000557177 HDGFL1Q5TGJ6 251 aa18.82■□□□□ 0.6
VRTN-202ENST00000557177 DDX46Q7L014 1031 aaKnown RBP18.82■□□□□ 0.6
VRTN-202ENST00000557177 MPNDQ8N594 471 aa18.82■□□□□ 0.6
VRTN-202ENST00000557177 PLBD2Q8NHP8 589 aa18.82■□□□□ 0.6
VRTN-202ENST00000557177 ADARB2Q9NS39 739 aaKnown RBP18.82■□□□□ 0.6
VRTN-202ENST00000557177 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
VRTN-202ENST00000557177 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
VRTN-202ENST00000557177 WDR33Q9C0J8 1336 aaKnown RBP18.81■□□□□ 0.6
VRTN-202ENST00000557177 CTCFP49711 727 aaPredicted RBP18.81■□□□□ 0.6
VRTN-202ENST00000557177 FMR1Q06787 632 aaKnown RBP eCLIP18.81■□□□□ 0.6
VRTN-202ENST00000557177 AIDAQ96BJ3 306 aa18.81■□□□□ 0.6
VRTN-202ENST00000557177 ISCA1Q9BUE6 129 aa18.81■□□□□ 0.6
VRTN-202ENST00000557177 ABT1Q9ULW3 272 aaKnown RBP18.81■□□□□ 0.6
VRTN-202ENST00000557177 CDHR2Q9BYE9 1310 aa18.8■□□□□ 0.6
VRTN-202ENST00000557177 ANKRD13DQ6ZTN6 518 aa18.8■□□□□ 0.6
VRTN-202ENST00000557177 TMC4Q7Z404 712 aa18.8■□□□□ 0.6
VRTN-202ENST00000557177 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
VRTN-202ENST00000557177 DBF4Q9UBU7 674 aaPredicted RBP18.8■□□□□ 0.6
VRTN-202ENST00000557177 TRAF5O00463 557 aa18.79■□□□□ 0.6
VRTN-202ENST00000557177 GMPSP49915 693 aaPredicted RBP18.79■□□□□ 0.6
VRTN-202ENST00000557177 CST9Q5W186 159 aa18.79■□□□□ 0.6
VRTN-202ENST00000557177 COL4A1P02462 1669 aa18.79■□□□□ 0.6
VRTN-202ENST00000557177 CIAPIN1Q6FI81 312 aa18.78■□□□□ 0.6
VRTN-202ENST00000557177 ZNF428Q96B54 188 aa18.78■□□□□ 0.6
VRTN-202ENST00000557177 YDJCA8MPS7 323 aa18.77■□□□□ 0.6
VRTN-202ENST00000557177 SF3B3Q15393 1217 aaKnown RBP18.77■□□□□ 0.6
VRTN-202ENST00000557177 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
VRTN-202ENST00000557177 FAM89AQ96GI7 184 aa18.77■□□□□ 0.6
VRTN-202ENST00000557177 MBIPQ9NS73 344 aa18.77■□□□□ 0.6
VRTN-202ENST00000557177 HYPKQ9NX55 129 aa18.77■□□□□ 0.6
VRTN-202ENST00000557177 PGAP2Q9UHJ9 254 aa18.77■□□□□ 0.6
VRTN-202ENST00000557177 ATP5J2-PTCD1G3V325 749 aa18.76■□□□□ 0.59
VRTN-202ENST00000557177 RAD17O75943 681 aa18.76■□□□□ 0.59
VRTN-202ENST00000557177 ZNF853P0CG23 659 aa18.76■□□□□ 0.59
VRTN-202ENST00000557177 MAP2K1Q02750 393 aaPredicted RBP18.76■□□□□ 0.59
VRTN-202ENST00000557177 TRIM28Q13263 835 aaKnown RBP18.76■□□□□ 0.59
VRTN-202ENST00000557177 TNIP1Q15025 636 aa18.76■□□□□ 0.59
VRTN-202ENST00000557177 TLL2Q9Y6L7 1015 aa18.76■□□□□ 0.59
VRTN-202ENST00000557177 HSPA8P11142 646 aaKnown RBP18.75■□□□□ 0.59
VRTN-202ENST00000557177 LBX1P52954 281 aa18.75■□□□□ 0.59
VRTN-202ENST00000557177 CELF1Q92879 486 aaKnown RBP18.75■□□□□ 0.59
VRTN-202ENST00000557177 CAPNS2Q96L46 248 aa18.75■□□□□ 0.59
VRTN-202ENST00000557177 PRKRIP1Q9H875 184 aaPredicted RBP18.75■□□□□ 0.59
VRTN-202ENST00000557177 ECE1P42892 770 aa18.74■□□□□ 0.59
VRTN-202ENST00000557177 HIRAP54198 1017 aaPredicted RBP18.74■□□□□ 0.59
VRTN-202ENST00000557177 ZC3H15Q8WU90 426 aaKnown RBP18.74■□□□□ 0.59
VRTN-202ENST00000557177 BCL2L13Q9BXK5 485 aa18.74■□□□□ 0.59
VRTN-202ENST00000557177 CYP4F22Q6NT55 531 aa18.73■□□□□ 0.59
VRTN-202ENST00000557177 TRPM4Q8TD43 1214 aa18.73■□□□□ 0.59
VRTN-202ENST00000557177 WASHC4Q2M389 1173 aa18.72■□□□□ 0.59
VRTN-202ENST00000557177 SAPCD2Q86UD0 394 aa18.72■□□□□ 0.59
VRTN-202ENST00000557177 GLIS2Q9BZE0 524 aaPredicted RBP18.72■□□□□ 0.59
VRTN-202ENST00000557177 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
VRTN-202ENST00000557177 CNOT7Q9UIV1 285 aaKnown RBP18.72■□□□□ 0.59
VRTN-202ENST00000557177 NSFL1CQ9UNZ2 370 aaKnown RBP18.72■□□□□ 0.59
VRTN-202ENST00000557177 SHTN1A0MZ66 631 aa18.71■□□□□ 0.59
VRTN-202ENST00000557177 IRS4O14654 1257 aaPredicted RBP18.71■□□□□ 0.59
VRTN-202ENST00000557177 CELF2O95319 508 aaKnown RBP18.71■□□□□ 0.59
VRTN-202ENST00000557177 GPSM2P81274 684 aa18.71■□□□□ 0.59
VRTN-202ENST00000557177 RTL5Q5HYW3 569 aaPredicted RBP18.71■□□□□ 0.59
VRTN-202ENST00000557177 PAXIP1Q6ZW49 1069 aaPredicted RBP18.71■□□□□ 0.59
VRTN-202ENST00000557177 GPR101Q96P66 508 aaPredicted RBP18.71■□□□□ 0.59
VRTN-202ENST00000557177 POLLQ9UGP5 575 aa18.71■□□□□ 0.59
VRTN-202ENST00000557177 APAF1O14727 1248 aa18.7■□□□□ 0.58
VRTN-202ENST00000557177 MICALL2Q8IY33 904 aa18.7■□□□□ 0.58
VRTN-202ENST00000557177 ZBTB38Q8NAP3 1195 aaPredicted RBP18.7■□□□□ 0.58
VRTN-202ENST00000557177 DPF2Q92785 391 aa18.7■□□□□ 0.58
VRTN-202ENST00000557177 HHIPL1Q96JK4 782 aa18.7■□□□□ 0.58
VRTN-202ENST00000557177 PHAXQ9H814 394 aaKnown RBP18.7■□□□□ 0.58
VRTN-202ENST00000557177 DBNDD1Q9H9R9 158 aa18.7■□□□□ 0.58
VRTN-202ENST00000557177 PSMD14O00487 310 aa18.69■□□□□ 0.58
VRTN-202ENST00000557177 GNAI1P63096 354 aa18.69■□□□□ 0.58
VRTN-202ENST00000557177 GOLGA2Q08379 1002 aa18.69■□□□□ 0.58
VRTN-202ENST00000557177 RIC3Q7Z5B4 369 aa18.69■□□□□ 0.58
VRTN-202ENST00000557177 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
VRTN-202ENST00000557177 RTL9Q8NET4 1388 aa18.68■□□□□ 0.58
VRTN-202ENST00000557177 C6orf229H3BNL8 230 aa18.68■□□□□ 0.58
VRTN-202ENST00000557177 H7C1D1 291 aa18.68■□□□□ 0.58
VRTN-202ENST00000557177 MAP2K2P36507 400 aa18.68■□□□□ 0.58
VRTN-202ENST00000557177 RPS8P62241 208 aaKnown RBP18.68■□□□□ 0.58
VRTN-202ENST00000557177 CALD1Q05682 793 aaKnown RBP18.68■□□□□ 0.58
VRTN-202ENST00000557177 GRM1Q13255 1194 aa18.68■□□□□ 0.58
VRTN-202ENST00000557177 CDC37L1Q7L3B6 337 aa18.68■□□□□ 0.58
VRTN-202ENST00000557177 TBC1D16Q8TBP0 767 aa18.68■□□□□ 0.58
VRTN-202ENST00000557177 SCN9AQ15858 1988 aa18.68■□□□□ 0.58
VRTN-202ENST00000557177 RIMBP2O15034 1052 aa18.67■□□□□ 0.58
VRTN-202ENST00000557177 ECE2O60344 883 aa18.67■□□□□ 0.58
VRTN-202ENST00000557177 AOC2O75106 756 aa18.67■□□□□ 0.58
VRTN-202ENST00000557177 EYA3Q99504 573 aa18.67■□□□□ 0.58
VRTN-202ENST00000557177 PODXL2Q9NZ53 605 aa18.67■□□□□ 0.58
VRTN-202ENST00000557177 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
VRTN-202ENST00000557177 EGFRP00533 1210 aa18.66■□□□□ 0.58
VRTN-202ENST00000557177 RPS12P25398 132 aaKnown RBP18.66■□□□□ 0.58
VRTN-202ENST00000557177 SAMD7Q7Z3H4 446 aa18.66■□□□□ 0.58
VRTN-202ENST00000557177 C8orf58Q8NAV2 365 aa18.66■□□□□ 0.58
VRTN-202ENST00000557177 CCDC191Q8NCU4 936 aa18.66■□□□□ 0.58
VRTN-202ENST00000557177 MYD88Q99836 296 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms