RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 LAS1LQ9Y4W2 734 aaKnown RBP23.91■■□□□ 1.42
VIPAS39-209ENST00000556909 WDR33Q9C0J8 1336 aaKnown RBP23.9■■□□□ 1.42
VIPAS39-209ENST00000556909 GRAPQ13588 217 aa23.9■■□□□ 1.42
VIPAS39-209ENST00000556909 DDX46Q7L014 1031 aaKnown RBP23.9■■□□□ 1.42
VIPAS39-209ENST00000556909 GRAPLQ8TC17 118 aaPredicted RBP23.9■■□□□ 1.42
VIPAS39-209ENST00000556909 RUNDC1Q96C34 613 aa23.9■■□□□ 1.42
VIPAS39-209ENST00000556909 ADARB2Q9NS39 739 aaKnown RBP23.9■■□□□ 1.42
VIPAS39-209ENST00000556909 TRAF5O00463 557 aa23.89■■□□□ 1.41
VIPAS39-209ENST00000556909 KIAA2012Q0VF49 1180 aa23.89■■□□□ 1.41
VIPAS39-209ENST00000556909 DDX10Q13206 875 aaKnown RBP23.89■■□□□ 1.41
VIPAS39-209ENST00000556909 MPNDQ8N594 471 aa23.89■■□□□ 1.41
VIPAS39-209ENST00000556909 HDGFL1Q5TGJ6 251 aa23.88■■□□□ 1.41
VIPAS39-209ENST00000556909 ZNF428Q96B54 188 aa23.88■■□□□ 1.41
VIPAS39-209ENST00000556909 COL4A1P02462 1669 aa23.88■■□□□ 1.41
VIPAS39-209ENST00000556909 HOXB7P09629 217 aa23.87■■□□□ 1.41
VIPAS39-209ENST00000556909 GMPSP49915 693 aaPredicted RBP23.87■■□□□ 1.41
VIPAS39-209ENST00000556909 WDR43Q15061 677 aaKnown RBP eCLIP23.87■■□□□ 1.41
VIPAS39-209ENST00000556909 CDHR2Q9BYE9 1310 aa23.86■■□□□ 1.41
VIPAS39-209ENST00000556909 LBX1P52954 281 aa23.86■■□□□ 1.41
VIPAS39-209ENST00000556909 CST9Q5W186 159 aa23.86■■□□□ 1.41
VIPAS39-209ENST00000556909 CIAPIN1Q6FI81 312 aa23.86■■□□□ 1.41
VIPAS39-209ENST00000556909 PLBD2Q8NHP8 589 aa23.86■■□□□ 1.41
VIPAS39-209ENST00000556909 HSPA8P11142 646 aaKnown RBP23.85■■□□□ 1.41
VIPAS39-209ENST00000556909 MAP2K1Q02750 393 aaPredicted RBP23.85■■□□□ 1.41
VIPAS39-209ENST00000556909 TMC4Q7Z404 712 aa23.85■■□□□ 1.41
VIPAS39-209ENST00000556909 ISCA1Q9BUE6 129 aa23.85■■□□□ 1.41
VIPAS39-209ENST00000556909 RAD17O75943 681 aa23.84■■□□□ 1.41
VIPAS39-209ENST00000556909 CAPNS2Q96L46 248 aa23.84■■□□□ 1.41
VIPAS39-209ENST00000556909 DBF4Q9UBU7 674 aaPredicted RBP23.84■■□□□ 1.41
VIPAS39-209ENST00000556909 ADAMTS8Q9UP79 889 aa23.84■■□□□ 1.41
VIPAS39-209ENST00000556909 ANKRD13DQ6ZTN6 518 aa23.83■■□□□ 1.41
VIPAS39-209ENST00000556909 PAXIP1Q6ZW49 1069 aaPredicted RBP23.83■■□□□ 1.41
VIPAS39-209ENST00000556909 TLL2Q9Y6L7 1015 aa23.83■■□□□ 1.41
VIPAS39-209ENST00000556909 YDJCA8MPS7 323 aa23.82■■□□□ 1.4
VIPAS39-209ENST00000556909 ECE1P42892 770 aa23.82■■□□□ 1.4
VIPAS39-209ENST00000556909 TNIP1Q15025 636 aa23.82■■□□□ 1.4
VIPAS39-209ENST00000556909 CYP4F22Q6NT55 531 aa23.82■■□□□ 1.4
VIPAS39-209ENST00000556909 FAM89AQ96GI7 184 aa23.82■■□□□ 1.4
VIPAS39-209ENST00000556909 CFAP44Q96MT7 982 aa23.82■■□□□ 1.4
VIPAS39-209ENST00000556909 BCL2L13Q9BXK5 485 aa23.82■■□□□ 1.4
VIPAS39-209ENST00000556909 ATP5J2-PTCD1G3V325 749 aa23.81■■□□□ 1.4
VIPAS39-209ENST00000556909 CELF1Q92879 486 aaKnown RBP23.81■■□□□ 1.4
VIPAS39-209ENST00000556909 GRM1Q13255 1194 aa23.8■■□□□ 1.4
VIPAS39-209ENST00000556909 SF3B3Q15393 1217 aaKnown RBP23.8■■□□□ 1.4
VIPAS39-209ENST00000556909 DUSP27Q5VZP5 1158 aa23.8■■□□□ 1.4
VIPAS39-209ENST00000556909 TRPM4Q8TD43 1214 aa23.8■■□□□ 1.4
VIPAS39-209ENST00000556909 GLIS2Q9BZE0 524 aaPredicted RBP23.8■■□□□ 1.4
VIPAS39-209ENST00000556909 MBIPQ9NS73 344 aa23.8■■□□□ 1.4
VIPAS39-209ENST00000556909 HYPKQ9NX55 129 aa23.8■■□□□ 1.4
VIPAS39-209ENST00000556909 PGAP2Q9UHJ9 254 aa23.8■■□□□ 1.4
VIPAS39-209ENST00000556909 SHTN1A0MZ66 631 aa23.79■■□□□ 1.4
VIPAS39-209ENST00000556909 CELF2O95319 508 aaKnown RBP23.79■■□□□ 1.4
VIPAS39-209ENST00000556909 HIRAP54198 1017 aaPredicted RBP23.79■■□□□ 1.4
VIPAS39-209ENST00000556909 ZC3H15Q8WU90 426 aaKnown RBP23.78■■□□□ 1.4
VIPAS39-209ENST00000556909 GPR101Q96P66 508 aaPredicted RBP23.78■■□□□ 1.4
VIPAS39-209ENST00000556909 POLR2AP24928 1970 aaKnown RBP23.78■■□□□ 1.4
VIPAS39-209ENST00000556909 SCN9AQ15858 1988 aa23.78■■□□□ 1.4
VIPAS39-209ENST00000556909 WASHC4Q2M389 1173 aa23.77■■□□□ 1.4
VIPAS39-209ENST00000556909 RTL5Q5HYW3 569 aaPredicted RBP23.77■■□□□ 1.4
VIPAS39-209ENST00000556909 SAPCD2Q86UD0 394 aa23.77■■□□□ 1.4
VIPAS39-209ENST00000556909 CNOT7Q9UIV1 285 aaKnown RBP23.77■■□□□ 1.4
VIPAS39-209ENST00000556909 NSFL1CQ9UNZ2 370 aaKnown RBP23.77■■□□□ 1.4
VIPAS39-209ENST00000556909 ZNF853P0CG23 659 aa23.76■■□□□ 1.39
VIPAS39-209ENST00000556909 TRIM28Q13263 835 aaKnown RBP23.76■■□□□ 1.39
VIPAS39-209ENST00000556909 MICALL2Q8IY33 904 aa23.76■■□□□ 1.39
VIPAS39-209ENST00000556909 DBNDD1Q9H9R9 158 aa23.76■■□□□ 1.39
VIPAS39-209ENST00000556909 IRS4O14654 1257 aaPredicted RBP23.75■■□□□ 1.39
VIPAS39-209ENST00000556909 GPSM2P81274 684 aa23.75■■□□□ 1.39
VIPAS39-209ENST00000556909 ZBTB12Q9Y330 459 aaPredicted RBP23.75■■□□□ 1.39
VIPAS39-209ENST00000556909 H7C1D1 291 aa23.74■■□□□ 1.39
VIPAS39-209ENST00000556909 PSMD14O00487 310 aa23.74■■□□□ 1.39
VIPAS39-209ENST00000556909 AOC2O75106 756 aa23.74■■□□□ 1.39
VIPAS39-209ENST00000556909 BEGAINQ9BUH8 593 aa23.74■■□□□ 1.39
VIPAS39-209ENST00000556909 ZNF408Q9H9D4 720 aa23.74■■□□□ 1.39
VIPAS39-209ENST00000556909 POLLQ9UGP5 575 aa23.74■■□□□ 1.39
VIPAS39-209ENST00000556909 PSME4Q14997 1843 aa23.74■■□□□ 1.39
VIPAS39-209ENST00000556909 C6orf229H3BNL8 230 aa23.73■■□□□ 1.39
VIPAS39-209ENST00000556909 RIMBP2O15034 1052 aa23.73■■□□□ 1.39
VIPAS39-209ENST00000556909 MAP2K2P36507 400 aa23.73■■□□□ 1.39
VIPAS39-209ENST00000556909 GOLGA2Q08379 1002 aa23.73■■□□□ 1.39
VIPAS39-209ENST00000556909 CDC37L1Q7L3B6 337 aa23.73■■□□□ 1.39
VIPAS39-209ENST00000556909 HHIPL1Q96JK4 782 aa23.73■■□□□ 1.39
VIPAS39-209ENST00000556909 PRKRIP1Q9H875 184 aaPredicted RBP23.73■■□□□ 1.39
VIPAS39-209ENST00000556909 IFT57Q9NWB7 429 aa23.73■■□□□ 1.39
VIPAS39-209ENST00000556909 RIC3Q7Z5B4 369 aa23.72■■□□□ 1.39
VIPAS39-209ENST00000556909 ZBTB38Q8NAP3 1195 aaPredicted RBP23.72■■□□□ 1.39
VIPAS39-209ENST00000556909 DPF2Q92785 391 aa23.72■■□□□ 1.39
VIPAS39-209ENST00000556909 PHAXQ9H814 394 aaKnown RBP23.72■■□□□ 1.39
VIPAS39-209ENST00000556909 RTL9Q8NET4 1388 aa23.72■■□□□ 1.39
VIPAS39-209ENST00000556909 APAF1O14727 1248 aa23.71■■□□□ 1.39
VIPAS39-209ENST00000556909 ECE2O60344 883 aa23.71■■□□□ 1.39
VIPAS39-209ENST00000556909 MYH3P11055 1940 aa23.71■■□□□ 1.39
VIPAS39-209ENST00000556909 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.38
VIPAS39-209ENST00000556909 SAMD7Q7Z3H4 446 aa23.7■■□□□ 1.38
VIPAS39-209ENST00000556909 TBC1D16Q8TBP0 767 aa23.7■■□□□ 1.38
VIPAS39-209ENST00000556909 ABHD8Q96I13 439 aa23.7■■□□□ 1.38
VIPAS39-209ENST00000556909 EYA3Q99504 573 aa23.7■■□□□ 1.38
VIPAS39-209ENST00000556909 SPEF2Q9C093 1822 aa23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 ELL2O00472 640 aaPredicted RBP23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 EGFRP00533 1210 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms