RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 HYPKQ9NX55 129 aa23.05■■□□□ 1.28
NPC2-208ENST00000556009 ZNRF3Q9ULT6 936 aa23.05■■□□□ 1.28
NPC2-208ENST00000556009 ZNF853P0CG23 659 aa23.04■■□□□ 1.28
NPC2-208ENST00000556009 DPP8Q6V1X1 898 aaPredicted RBP23.04■■□□□ 1.28
NPC2-208ENST00000556009 TMC4Q7Z404 712 aa23.04■■□□□ 1.28
NPC2-208ENST00000556009 MPNDQ8N594 471 aa23.04■■□□□ 1.28
NPC2-208ENST00000556009 CAPN15O75808 1086 aa23.03■■□□□ 1.28
NPC2-208ENST00000556009 VEGFBP49765 207 aa23.03■■□□□ 1.28
NPC2-208ENST00000556009 TRIM28Q13263 835 aaKnown RBP23.03■■□□□ 1.28
NPC2-208ENST00000556009 DUSP27Q5VZP5 1158 aa23.03■■□□□ 1.28
NPC2-208ENST00000556009 COL4A1P02462 1669 aa23.03■■□□□ 1.28
NPC2-208ENST00000556009 DUOX1Q9NRD9 1551 aa23.02■■□□□ 1.28
NPC2-208ENST00000556009 RASSF10A6NK89 507 aa23.02■■□□□ 1.28
NPC2-208ENST00000556009 CXCL9Q07325 125 aa23.02■■□□□ 1.28
NPC2-208ENST00000556009 KIAA2012Q0VF49 1180 aa23.02■■□□□ 1.28
NPC2-208ENST00000556009 MBIPQ9NS73 344 aa23.02■■□□□ 1.28
NPC2-208ENST00000556009 SF3B3Q15393 1217 aaKnown RBP23.01■■□□□ 1.27
NPC2-208ENST00000556009 ZNF428Q96B54 188 aa23.01■■□□□ 1.27
NPC2-208ENST00000556009 GPRC5DQ9NZD1 345 aa23.01■■□□□ 1.27
NPC2-208ENST00000556009 DEFB115Q30KQ5 88 aa23■■□□□ 1.27
NPC2-208ENST00000556009 ADARB2Q9NS39 739 aaKnown RBP23■■□□□ 1.27
NPC2-208ENST00000556009 THSD7BQ9C0I4 1608 aa23■■□□□ 1.27
NPC2-208ENST00000556009 FOXN1O15353 648 aa22.99■■□□□ 1.27
NPC2-208ENST00000556009 CALD1Q05682 793 aaKnown RBP22.99■■□□□ 1.27
NPC2-208ENST00000556009 FMR1Q06787 632 aaKnown RBP eCLIP22.99■■□□□ 1.27
NPC2-208ENST00000556009 FAM89AQ96GI7 184 aa22.99■■□□□ 1.27
NPC2-208ENST00000556009 IFT57Q9NWB7 429 aa22.99■■□□□ 1.27
NPC2-208ENST00000556009 APAF1O14727 1248 aa22.98■■□□□ 1.27
NPC2-208ENST00000556009 GNAI1P63096 354 aa22.98■■□□□ 1.27
NPC2-208ENST00000556009 ATP5J2-PTCD1G3V325 749 aa22.97■■□□□ 1.27
NPC2-208ENST00000556009 TNIP1Q15025 636 aa22.97■■□□□ 1.27
NPC2-208ENST00000556009 CIAPIN1Q6FI81 312 aa22.97■■□□□ 1.27
NPC2-208ENST00000556009 CDHR2Q9BYE9 1310 aa22.97■■□□□ 1.27
NPC2-208ENST00000556009 PRDM10Q9NQV6 1147 aa22.96■■□□□ 1.27
NPC2-208ENST00000556009 WBP1LQ9NX94 342 aa22.96■■□□□ 1.27
NPC2-208ENST00000556009 PGAP2Q9UHJ9 254 aa22.96■■□□□ 1.27
NPC2-208ENST00000556009 GMPSP49915 693 aaPredicted RBP22.95■■□□□ 1.26
NPC2-208ENST00000556009 ABT1Q9ULW3 272 aaKnown RBP22.95■■□□□ 1.26
NPC2-208ENST00000556009 RIC3Q7Z5B4 369 aa22.94■■□□□ 1.26
NPC2-208ENST00000556009 CELF1Q92879 486 aaKnown RBP22.94■■□□□ 1.26
NPC2-208ENST00000556009 AIDAQ96BJ3 306 aa22.94■■□□□ 1.26
NPC2-208ENST00000556009 CHMP4AQ9BY43 222 aa22.94■■□□□ 1.26
NPC2-208ENST00000556009 WDR33Q9C0J8 1336 aaKnown RBP22.93■■□□□ 1.26
NPC2-208ENST00000556009 IRS4O14654 1257 aaPredicted RBP22.93■■□□□ 1.26
NPC2-208ENST00000556009 CTCFP49711 727 aaPredicted RBP22.93■■□□□ 1.26
NPC2-208ENST00000556009 GOLGA2Q08379 1002 aa22.93■■□□□ 1.26
NPC2-208ENST00000556009 CST9Q5W186 159 aa22.93■■□□□ 1.26
NPC2-208ENST00000556009 ZC3H15Q8WU90 426 aaKnown RBP22.93■■□□□ 1.26
NPC2-208ENST00000556009 YDJCA8MPS7 323 aa22.92■■□□□ 1.26
NPC2-208ENST00000556009 TRAF5O00463 557 aa22.92■■□□□ 1.26
NPC2-208ENST00000556009 RAD17O75943 681 aa22.92■■□□□ 1.26
NPC2-208ENST00000556009 HSP90B1P14625 803 aaKnown RBP22.92■■□□□ 1.26
NPC2-208ENST00000556009 WASHC4Q2M389 1173 aa22.92■■□□□ 1.26
NPC2-208ENST00000556009 ZBTB38Q8NAP3 1195 aaPredicted RBP22.92■■□□□ 1.26
NPC2-208ENST00000556009 BCL2L13Q9BXK5 485 aa22.92■■□□□ 1.26
NPC2-208ENST00000556009 PHAXQ9H814 394 aaKnown RBP22.92■■□□□ 1.26
NPC2-208ENST00000556009 NSFL1CQ9UNZ2 370 aaKnown RBP22.92■■□□□ 1.26
NPC2-208ENST00000556009 POLR2AP24928 1970 aaKnown RBP22.92■■□□□ 1.26
NPC2-208ENST00000556009 RPS8P62241 208 aaKnown RBP22.91■■□□□ 1.26
NPC2-208ENST00000556009 MAP2K1Q02750 393 aaPredicted RBP22.91■■□□□ 1.26
NPC2-208ENST00000556009 ELL2O00472 640 aaPredicted RBP22.9■■□□□ 1.26
NPC2-208ENST00000556009 RTL5Q5HYW3 569 aaPredicted RBP22.9■■□□□ 1.26
NPC2-208ENST00000556009 CCDC191Q8NCU4 936 aa22.9■■□□□ 1.26
NPC2-208ENST00000556009 SCN9AQ15858 1988 aa22.9■■□□□ 1.26
NPC2-208ENST00000556009 ECE1P42892 770 aa22.89■■□□□ 1.25
NPC2-208ENST00000556009 HIRAP54198 1017 aaPredicted RBP22.89■■□□□ 1.25
NPC2-208ENST00000556009 C8orf58Q8NAV2 365 aa22.89■■□□□ 1.25
NPC2-208ENST00000556009 DPF2Q92785 391 aa22.89■■□□□ 1.25
NPC2-208ENST00000556009 POLLQ9UGP5 575 aa22.89■■□□□ 1.25
NPC2-208ENST00000556009 CNOT7Q9UIV1 285 aaKnown RBP22.89■■□□□ 1.25
NPC2-208ENST00000556009 TLL2Q9Y6L7 1015 aa22.89■■□□□ 1.25
NPC2-208ENST00000556009 H7C1D1 291 aa22.88■■□□□ 1.25
NPC2-208ENST00000556009 GPSM2P81274 684 aa22.88■■□□□ 1.25
NPC2-208ENST00000556009 EYA3Q99504 573 aa22.88■■□□□ 1.25
NPC2-208ENST00000556009 C6orf229H3BNL8 230 aa22.87■■□□□ 1.25
NPC2-208ENST00000556009 PCCAP05165 728 aaPredicted RBP22.87■■□□□ 1.25
NPC2-208ENST00000556009 CCDC30Q5VVM6 783 aa22.87■■□□□ 1.25
NPC2-208ENST00000556009 CAPNS2Q96L46 248 aa22.87■■□□□ 1.25
NPC2-208ENST00000556009 MYD88Q99836 296 aa22.87■■□□□ 1.25
NPC2-208ENST00000556009 PODXL2Q9NZ53 605 aa22.87■■□□□ 1.25
NPC2-208ENST00000556009 SHTN1A0MZ66 631 aa22.86■■□□□ 1.25
NPC2-208ENST00000556009 DDX58O95786 925 aaKnown RBP22.86■■□□□ 1.25
NPC2-208ENST00000556009 CDC37L1Q7L3B6 337 aa22.86■■□□□ 1.25
NPC2-208ENST00000556009 TBC1D16Q8TBP0 767 aa22.86■■□□□ 1.25
NPC2-208ENST00000556009 METTL22Q9BUU2 404 aaPredicted RBP22.86■■□□□ 1.25
NPC2-208ENST00000556009 SPEF2Q9C093 1822 aa22.86■■□□□ 1.25
NPC2-208ENST00000556009 PSME4Q14997 1843 aa22.85■■□□□ 1.25
NPC2-208ENST00000556009 LBX1P52954 281 aa22.85■■□□□ 1.25
NPC2-208ENST00000556009 TRPM4Q8TD43 1214 aa22.85■■□□□ 1.25
NPC2-208ENST00000556009 HHIPL1Q96JK4 782 aa22.85■■□□□ 1.25
NPC2-208ENST00000556009 CWC25Q9NXE8 425 aaPredicted RBP22.85■■□□□ 1.25
NPC2-208ENST00000556009 MYH3P11055 1940 aa22.84■■□□□ 1.25
NPC2-208ENST00000556009 PSMD14O00487 310 aa22.84■■□□□ 1.25
NPC2-208ENST00000556009 RIMBP2O15034 1052 aa22.84■■□□□ 1.25
NPC2-208ENST00000556009 PDE8AO60658 829 aa22.84■■□□□ 1.25
NPC2-208ENST00000556009 RPS12P25398 132 aaKnown RBP22.84■■□□□ 1.25
NPC2-208ENST00000556009 SAPCD2Q86UD0 394 aa22.84■■□□□ 1.25
NPC2-208ENST00000556009 MICALL2Q8IY33 904 aa22.84■■□□□ 1.25
NPC2-208ENST00000556009 GPR101Q96P66 508 aaPredicted RBP22.84■■□□□ 1.25
NPC2-208ENST00000556009 GLIS2Q9BZE0 524 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms