RNA–Protein interactions for RNA: ENST00000555963.1

CCNB1IP1-212, Transcript of cyclin B1 interacting protein 1, humanhuman

TSL 4

Gene CCNB1IP1, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1-212ENST00000555963 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
CCNB1IP1-212ENST00000555963 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
CCNB1IP1-212ENST00000555963 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
CCNB1IP1-212ENST00000555963 C1QTNF8P60827 252 aa12.85□□□□□ -0.35
CCNB1IP1-212ENST00000555963 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
CCNB1IP1-212ENST00000555963 SCN4AP35499 1836 aa12.84□□□□□ -0.35
CCNB1IP1-212ENST00000555963 IQCA1LA6NCM1 817 aa12.84□□□□□ -0.35
CCNB1IP1-212ENST00000555963 TOMM70O94826 608 aa12.84□□□□□ -0.35
CCNB1IP1-212ENST00000555963 IGKV5-2P06315 115 aa12.84□□□□□ -0.35
CCNB1IP1-212ENST00000555963 TRMT2AQ8IZ69 625 aaKnown RBP12.84□□□□□ -0.35
CCNB1IP1-212ENST00000555963 ZNF526Q8TF50 670 aaPredicted RBP12.84□□□□□ -0.35
CCNB1IP1-212ENST00000555963 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
CCNB1IP1-212ENST00000555963 RTFDC1Q9BY42 306 aaPredicted RBP12.84□□□□□ -0.35
CCNB1IP1-212ENST00000555963 ALDH1L1O75891 902 aa12.83□□□□□ -0.36
CCNB1IP1-212ENST00000555963 VEGFAP15692 232 aaPredicted RBP12.83□□□□□ -0.36
CCNB1IP1-212ENST00000555963 CTSWP56202 376 aa12.83□□□□□ -0.36
CCNB1IP1-212ENST00000555963 GCKRQ14397 625 aa12.83□□□□□ -0.36
CCNB1IP1-212ENST00000555963 DPP8Q6V1X1 898 aaPredicted RBP12.83□□□□□ -0.36
CCNB1IP1-212ENST00000555963 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
CCNB1IP1-212ENST00000555963 G2E3Q7L622 706 aa12.83□□□□□ -0.36
CCNB1IP1-212ENST00000555963 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
CCNB1IP1-212ENST00000555963 H7C1W4 665 aa12.82□□□□□ -0.36
CCNB1IP1-212ENST00000555963 TCERG1O14776 1098 aaKnown RBP12.82□□□□□ -0.36
CCNB1IP1-212ENST00000555963 KIF3CO14782 793 aa12.82□□□□□ -0.36
CCNB1IP1-212ENST00000555963 RPS8P62241 208 aaKnown RBP12.82□□□□□ -0.36
CCNB1IP1-212ENST00000555963 MIER1Q8N108 512 aa12.82□□□□□ -0.36
CCNB1IP1-212ENST00000555963 MPNDQ8N594 471 aa12.82□□□□□ -0.36
CCNB1IP1-212ENST00000555963 RBM46Q8TBY0 533 aaKnown RBP12.82□□□□□ -0.36
CCNB1IP1-212ENST00000555963 EYA3Q99504 573 aa12.82□□□□□ -0.36
CCNB1IP1-212ENST00000555963 KIF16BQ96L93 1317 aa12.82□□□□□ -0.36
CCNB1IP1-212ENST00000555963 FZD9O00144 591 aa12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 FSTL1Q12841 308 aa12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 CWF19L2Q2TBE0 894 aaKnown RBP12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 UBE3BQ7Z3V4 1068 aa12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 NIM1KQ8IY84 436 aa12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 LARGE2Q8N3Y3 721 aa12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 ZNF277Q9NRM2 450 aaPredicted RBP12.81□□□□□ -0.36
CCNB1IP1-212ENST00000555963 PPIP5K2O43314 1243 aa12.8□□□□□ -0.36
CCNB1IP1-212ENST00000555963 PRELPP51888 382 aa12.8□□□□□ -0.36
CCNB1IP1-212ENST00000555963 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
CCNB1IP1-212ENST00000555963 RTL5Q5HYW3 569 aaPredicted RBP12.8□□□□□ -0.36
CCNB1IP1-212ENST00000555963 BEND3Q5T5X7 828 aa12.8□□□□□ -0.36
CCNB1IP1-212ENST00000555963 GPC2Q8N158 579 aa12.8□□□□□ -0.36
CCNB1IP1-212ENST00000555963 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
CCNB1IP1-212ENST00000555963 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
CCNB1IP1-212ENST00000555963 LTBP1Q14766 1721 aa12.79□□□□□ -0.36
CCNB1IP1-212ENST00000555963 GRM8O00222 908 aa12.79□□□□□ -0.36
CCNB1IP1-212ENST00000555963 IGHMBP2P38935 993 aaKnown RBP12.79□□□□□ -0.36
CCNB1IP1-212ENST00000555963 MRPL50Q8N5N7 158 aaKnown RBP12.79□□□□□ -0.36
CCNB1IP1-212ENST00000555963 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
CCNB1IP1-212ENST00000555963 NMRK2Q9NPI5 230 aa12.79□□□□□ -0.36
CCNB1IP1-212ENST00000555963 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
CCNB1IP1-212ENST00000555963 C9orf78Q9NZ63 289 aaPredicted RBP12.79□□□□□ -0.36
CCNB1IP1-212ENST00000555963 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCNB1IP1-212ENST00000555963 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
CCNB1IP1-212ENST00000555963 CELF1Q92879 486 aaKnown RBP12.78□□□□□ -0.36
CCNB1IP1-212ENST00000555963 BSDC1Q9NW68 430 aaPredicted RBP12.78□□□□□ -0.36
CCNB1IP1-212ENST00000555963 XDHP47989 1333 aa12.78□□□□□ -0.36
CCNB1IP1-212ENST00000555963 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
CCNB1IP1-212ENST00000555963 TAF1P21675 1872 aa12.78□□□□□ -0.36
CCNB1IP1-212ENST00000555963 DUOX1Q9NRD9 1551 aa12.77□□□□□ -0.36
CCNB1IP1-212ENST00000555963 CSF1RP07333 972 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 CASP7P55210 303 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 WASHC4Q2M389 1173 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 SLC4A10Q6U841 1118 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 OLFM4Q6UX06 510 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 PNMA8AQ86V59 439 aaPredicted RBP12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 SSH1Q8WYL5 1049 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 ARHGAP45Q92619 1136 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 API5Q9BZZ5 524 aaKnown RBP12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 RRAGCQ9HB90 399 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 ZNRF3Q9ULT6 936 aa12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 NSFL1CQ9UNZ2 370 aaKnown RBP12.77□□□□□ -0.37
CCNB1IP1-212ENST00000555963 ANKRD18BA2A2Z9 1011 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 F6X3S4 739 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 ATP2B4P23634 1241 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 CCT4P50991 539 aaKnown RBP12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 TNIP1Q15025 636 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 AOC3Q16853 763 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 MPHOSPH8Q99549 860 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 ANKIB1Q9P2G1 1089 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 HACL1Q9UJ83 578 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 GGA1Q9UJY5 639 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 UTYO14607 1347 aa12.76□□□□□ -0.37
CCNB1IP1-212ENST00000555963 HSPA6P17066 643 aa12.75□□□□□ -0.37
CCNB1IP1-212ENST00000555963 ITGA6P23229 1130 aa12.75□□□□□ -0.37
CCNB1IP1-212ENST00000555963 IFIT5Q13325 482 aaKnown RBP12.75□□□□□ -0.37
CCNB1IP1-212ENST00000555963 ZC3H12CQ9C0D7 883 aaKnown RBP12.75□□□□□ -0.37
CCNB1IP1-212ENST00000555963 ANKRD2Q9GZV1 360 aa12.75□□□□□ -0.37
CCNB1IP1-212ENST00000555963 GREM2Q9H772 168 aa12.75□□□□□ -0.37
CCNB1IP1-212ENST00000555963 ZNF541Q9H0D2 1346 aa12.74□□□□□ -0.37
CCNB1IP1-212ENST00000555963 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms