RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 SRCIN1Q9C0H9 1055 aa28.98■■■□□ 2.23
CDKN3-208ENST00000555837 GPBP1L1Q9HC44 474 aaPredicted RBP28.98■■■□□ 2.23
CDKN3-208ENST00000555837 LAMB2P55268 1798 aa28.98■■■□□ 2.23
CDKN3-208ENST00000555837 KDM2BQ8NHM5 1336 aa28.97■■■□□ 2.23
CDKN3-208ENST00000555837 BRPF1P55201 1214 aaPredicted RBP28.97■■■□□ 2.23
CDKN3-208ENST00000555837 RASSF7Q02833 373 aa28.97■■■□□ 2.23
CDKN3-208ENST00000555837 BEND3Q5T5X7 828 aa28.97■■■□□ 2.23
CDKN3-208ENST00000555837 SLC4A10Q6U841 1118 aa28.97■■■□□ 2.23
CDKN3-208ENST00000555837 VPS33BQ9H267 617 aa28.97■■■□□ 2.23
CDKN3-208ENST00000555837 FER1L6Q2WGJ9 1857 aa28.96■■■□□ 2.23
CDKN3-208ENST00000555837 UBE3BQ7Z3V4 1068 aa28.96■■■□□ 2.23
CDKN3-208ENST00000555837 C9orf78Q9NZ63 289 aaPredicted RBP28.96■■■□□ 2.23
CDKN3-208ENST00000555837 KIF16BQ96L93 1317 aa28.95■■■□□ 2.23
CDKN3-208ENST00000555837 DDX60Q8IY21 1712 aaKnown RBP28.95■■■□□ 2.23
CDKN3-208ENST00000555837 F6X3S4 739 aa28.95■■■□□ 2.22
CDKN3-208ENST00000555837 DPY19L2Q6NUT2 758 aa28.95■■■□□ 2.22
CDKN3-208ENST00000555837 CDC5LQ99459 802 aaKnown RBP28.94■■■□□ 2.22
CDKN3-208ENST00000555837 PLA2G12BQ9BX93 195 aa28.94■■■□□ 2.22
CDKN3-208ENST00000555837 IPO8O15397 1037 aaKnown RBP28.93■■■□□ 2.22
CDKN3-208ENST00000555837 CTSWP56202 376 aa28.93■■■□□ 2.22
CDKN3-208ENST00000555837 RPS8P62241 208 aaKnown RBP28.93■■■□□ 2.22
CDKN3-208ENST00000555837 API5Q9BZZ5 524 aaKnown RBP28.93■■■□□ 2.22
CDKN3-208ENST00000555837 SBF1O95248 1867 aa28.93■■■□□ 2.22
CDKN3-208ENST00000555837 JDP2Q8WYK2 163 aa28.92■■■□□ 2.22
CDKN3-208ENST00000555837 GRM8O00222 908 aa28.91■■■□□ 2.22
CDKN3-208ENST00000555837 DPP8Q6V1X1 898 aaPredicted RBP28.91■■■□□ 2.22
CDKN3-208ENST00000555837 MPNDQ8N594 471 aa28.91■■■□□ 2.22
CDKN3-208ENST00000555837 HDAC5Q9UQL6 1122 aa28.91■■■□□ 2.22
CDKN3-208ENST00000555837 RTL9Q8NET4 1388 aa28.9■■■□□ 2.22
CDKN3-208ENST00000555837 RARSP54136 660 aaKnown RBP28.9■■■□□ 2.22
CDKN3-208ENST00000555837 ANKRD18AQ8IVF6 992 aa28.9■■■□□ 2.22
CDKN3-208ENST00000555837 ARHGAP45Q92619 1136 aa28.9■■■□□ 2.22
CDKN3-208ENST00000555837 BCL2L13Q9BXK5 485 aa28.9■■■□□ 2.22
CDKN3-208ENST00000555837 IARSP41252 1262 aaKnown RBP28.89■■■□□ 2.22
CDKN3-208ENST00000555837 CCT4P50991 539 aaKnown RBP28.88■■■□□ 2.21
CDKN3-208ENST00000555837 TTLL11Q8NHH1 800 aa28.88■■■□□ 2.21
CDKN3-208ENST00000555837 JARID2Q92833 1246 aaPredicted RBP28.87■■■□□ 2.21
CDKN3-208ENST00000555837 ZNF526Q8TF50 670 aaPredicted RBP28.86■■■□□ 2.21
CDKN3-208ENST00000555837 RTFDC1Q9BY42 306 aaPredicted RBP28.86■■■□□ 2.21
CDKN3-208ENST00000555837 DICER1Q9UPY3 1922 aaKnown RBP28.85■■■□□ 2.21
CDKN3-208ENST00000555837 GLTPD2A6NH11 291 aa28.85■■■□□ 2.21
CDKN3-208ENST00000555837 IGHMBP2P38935 993 aaKnown RBP28.85■■■□□ 2.21
CDKN3-208ENST00000555837 CELF1Q92879 486 aaKnown RBP28.85■■■□□ 2.21
CDKN3-208ENST00000555837 ZNF277Q9NRM2 450 aaPredicted RBP28.85■■■□□ 2.21
CDKN3-208ENST00000555837 NOB1Q9ULX3 412 aaKnown RBP28.85■■■□□ 2.21
CDKN3-208ENST00000555837 MYH3P11055 1940 aa28.84■■■□□ 2.21
CDKN3-208ENST00000555837 CASP7P55210 303 aa28.84■■■□□ 2.21
CDKN3-208ENST00000555837 OLFM4Q6UX06 510 aa28.84■■■□□ 2.21
CDKN3-208ENST00000555837 EYA3Q99504 573 aa28.84■■■□□ 2.21
CDKN3-208ENST00000555837 CCDC88AQ3V6T2 1871 aa28.84■■■□□ 2.21
CDKN3-208ENST00000555837 LARGE2Q8N3Y3 721 aa28.83■■■□□ 2.21
CDKN3-208ENST00000555837 NSFL1CQ9UNZ2 370 aaKnown RBP28.83■■■□□ 2.21
CDKN3-208ENST00000555837 CSF1RP07333 972 aa28.82■■■□□ 2.2
CDKN3-208ENST00000555837 SNED1Q8TER0 1413 aa28.81■■■□□ 2.2
CDKN3-208ENST00000555837 ANKRD18BA2A2Z9 1011 aa28.81■■■□□ 2.2
CDKN3-208ENST00000555837 PPIP5K2O43314 1243 aa28.81■■■□□ 2.2
CDKN3-208ENST00000555837 EIF6P56537 245 aaKnown RBP28.81■■■□□ 2.2
CDKN3-208ENST00000555837 IFIT5Q13325 482 aaKnown RBP28.81■■■□□ 2.2
CDKN3-208ENST00000555837 NIM1KQ8IY84 436 aa28.81■■■□□ 2.2
CDKN3-208ENST00000555837 C16orf71Q8IYS4 520 aaPredicted RBP28.81■■■□□ 2.2
CDKN3-208ENST00000555837 CCDC85AQ96PX6 553 aaPredicted RBP28.81■■■□□ 2.2
CDKN3-208ENST00000555837 MPHOSPH8Q99549 860 aa28.81■■■□□ 2.2
CDKN3-208ENST00000555837 BSDC1Q9NW68 430 aaPredicted RBP28.81■■■□□ 2.2
CDKN3-208ENST00000555837 UTYO14607 1347 aa28.8■■■□□ 2.2
CDKN3-208ENST00000555837 GREM2Q9H772 168 aa28.8■■■□□ 2.2
CDKN3-208ENST00000555837 SEC31BQ9NQW1 1179 aa28.8■■■□□ 2.2
CDKN3-208ENST00000555837 ANKIB1Q9P2G1 1089 aa28.8■■■□□ 2.2
CDKN3-208ENST00000555837 TIAM2Q8IVF5 1701 aa28.8■■■□□ 2.2
CDKN3-208ENST00000555837 ITGA6P23229 1130 aa28.79■■■□□ 2.2
CDKN3-208ENST00000555837 PRELPP51888 382 aa28.79■■■□□ 2.2
CDKN3-208ENST00000555837 CCDC57Q2TAC2 916 aa28.79■■■□□ 2.2
CDKN3-208ENST00000555837 PODXL2Q9NZ53 605 aa28.79■■■□□ 2.2
CDKN3-208ENST00000555837 CHMP3Q9Y3E7 222 aa28.79■■■□□ 2.2
CDKN3-208ENST00000555837 C6orf229H3BNL8 230 aa28.77■■■□□ 2.2
CDKN3-208ENST00000555837 TAF7LQ5H9L4 462 aa28.77■■■□□ 2.2
CDKN3-208ENST00000555837 XDHP47989 1333 aa28.76■■■□□ 2.19
CDKN3-208ENST00000555837 FZD9O00144 591 aa28.76■■■□□ 2.19
CDKN3-208ENST00000555837 VEGFAP15692 232 aaPredicted RBP28.76■■■□□ 2.19
CDKN3-208ENST00000555837 KIAA2012Q0VF49 1180 aa28.76■■■□□ 2.19
CDKN3-208ENST00000555837 WASHC4Q2M389 1173 aa28.76■■■□□ 2.19
CDKN3-208ENST00000555837 ANKRD2Q9GZV1 360 aa28.76■■■□□ 2.19
CDKN3-208ENST00000555837 GGA1Q9UJY5 639 aa28.76■■■□□ 2.19
CDKN3-208ENST00000555837 LRRC37AA6NMS7 1700 aa28.76■■■□□ 2.19
CDKN3-208ENST00000555837 IQCA1LA6NCM1 817 aa28.75■■■□□ 2.19
CDKN3-208ENST00000555837 LMBR1LQ6UX01 489 aa28.75■■■□□ 2.19
CDKN3-208ENST00000555837 ATF7IPQ6VMQ6 1270 aa28.75■■■□□ 2.19
CDKN3-208ENST00000555837 FRAT1Q92837 279 aaPredicted RBP28.75■■■□□ 2.19
CDKN3-208ENST00000555837 ZC3H12CQ9C0D7 883 aaKnown RBP28.75■■■□□ 2.19
CDKN3-208ENST00000555837 ATP2B4P23634 1241 aa28.74■■■□□ 2.19
CDKN3-208ENST00000555837 FOXO4P98177 505 aa28.74■■■□□ 2.19
CDKN3-208ENST00000555837 FAM161AQ3B820 660 aa28.74■■■□□ 2.19
CDKN3-208ENST00000555837 ZKSCAN2Q63HK3 967 aa28.74■■■□□ 2.19
CDKN3-208ENST00000555837 G3V3G9 751 aa28.73■■■□□ 2.19
CDKN3-208ENST00000555837 DCAF8Q5TAQ9 597 aa28.73■■■□□ 2.19
CDKN3-208ENST00000555837 GPC2Q8N158 579 aa28.73■■■□□ 2.19
CDKN3-208ENST00000555837 ZNRF3Q9ULT6 936 aa28.73■■■□□ 2.19
CDKN3-208ENST00000555837 NBPF7P0C2Y1 421 aaPredicted RBP28.72■■■□□ 2.19
CDKN3-208ENST00000555837 GPSM2P81274 684 aa28.72■■■□□ 2.19
CDKN3-208ENST00000555837 AOC3Q16853 763 aa28.72■■■□□ 2.19
CDKN3-208ENST00000555837 TAF1P21675 1872 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms