RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 MYD88Q99836 296 aa19.87■□□□□ 0.77
SNX6-205ENST00000555648 SNED1Q8TER0 1413 aa19.86■□□□□ 0.77
SNX6-205ENST00000555648 TSR2Q969E8 191 aaKnown RBP19.86■□□□□ 0.77
SNX6-205ENST00000555648 SF3B3Q15393 1217 aaKnown RBP19.85■□□□□ 0.77
SNX6-205ENST00000555648 SLC51AQ86UW1 340 aa19.85■□□□□ 0.77
SNX6-205ENST00000555648 WWC1Q8IX03 1113 aa19.85■□□□□ 0.77
SNX6-205ENST00000555648 JMYQ8N9B5 988 aa19.85■□□□□ 0.77
SNX6-205ENST00000555648 ZBTB38Q8NAP3 1195 aaPredicted RBP19.85■□□□□ 0.77
SNX6-205ENST00000555648 RTFDC1Q9BY42 306 aaPredicted RBP19.85■□□□□ 0.77
SNX6-205ENST00000555648 CREBZFQ9NS37 354 aa19.85■□□□□ 0.77
SNX6-205ENST00000555648 ZNRF3Q9ULT6 936 aa19.85■□□□□ 0.77
SNX6-205ENST00000555648 CCDC191Q8NCU4 936 aa19.84■□□□□ 0.77
SNX6-205ENST00000555648 TSPYL6Q8N831 410 aa19.83■□□□□ 0.77
SNX6-205ENST00000555648 CWC25Q9NXE8 425 aaPredicted RBP19.83■□□□□ 0.77
SNX6-205ENST00000555648 NSFL1CQ9UNZ2 370 aaKnown RBP19.83■□□□□ 0.77
SNX6-205ENST00000555648 KIAA2012Q0VF49 1180 aa19.82■□□□□ 0.76
SNX6-205ENST00000555648 NEXNQ0ZGT2 675 aa19.82■□□□□ 0.76
SNX6-205ENST00000555648 TWISTNBQ3B726 338 aaPredicted RBP19.82■□□□□ 0.76
SNX6-205ENST00000555648 METTL22Q9BUU2 404 aaPredicted RBP19.82■□□□□ 0.76
SNX6-205ENST00000555648 SALL2Q9Y467 1007 aaPredicted RBP19.82■□□□□ 0.76
SNX6-205ENST00000555648 IL16Q14005 1332 aa19.81■□□□□ 0.76
SNX6-205ENST00000555648 TNIP1Q15025 636 aa19.81■□□□□ 0.76
SNX6-205ENST00000555648 MAP1SQ66K74 1059 aaPredicted RBP19.81■□□□□ 0.76
SNX6-205ENST00000555648 CIAPIN1Q6FI81 312 aa19.81■□□□□ 0.76
SNX6-205ENST00000555648 CNTROBQ8N137 903 aa19.81■□□□□ 0.76
SNX6-205ENST00000555648 CELF1Q92879 486 aaKnown RBP19.81■□□□□ 0.76
SNX6-205ENST00000555648 BCL2L13Q9BXK5 485 aa19.81■□□□□ 0.76
SNX6-205ENST00000555648 MAP3K2Q9Y2U5 619 aa19.81■□□□□ 0.76
SNX6-205ENST00000555648 C6orf229H3BNL8 230 aa19.8■□□□□ 0.76
SNX6-205ENST00000555648 PCCAP05165 728 aaPredicted RBP19.8■□□□□ 0.76
SNX6-205ENST00000555648 EPS15P42566 896 aa19.8■□□□□ 0.76
SNX6-205ENST00000555648 RPS8P62241 208 aaKnown RBP19.8■□□□□ 0.76
SNX6-205ENST00000555648 WASHC4Q2M389 1173 aa19.8■□□□□ 0.76
SNX6-205ENST00000555648 CCDC152Q4G0S7 254 aa19.8■□□□□ 0.76
SNX6-205ENST00000555648 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
SNX6-205ENST00000555648 KSR2Q6VAB6 950 aa19.8■□□□□ 0.76
SNX6-205ENST00000555648 MKRN1Q9UHC7 482 aaKnown RBP19.8■□□□□ 0.76
SNX6-205ENST00000555648 ANKRD36CQ5JPF3 1778 aa19.8■□□□□ 0.76
SNX6-205ENST00000555648 SCN4AP35499 1836 aa19.79■□□□□ 0.76
SNX6-205ENST00000555648 TMEM88BA6NKF7 163 aa19.79■□□□□ 0.76
SNX6-205ENST00000555648 SCNN1DP51172 638 aa19.79■□□□□ 0.76
SNX6-205ENST00000555648 CXCL9Q07325 125 aa19.79■□□□□ 0.76
SNX6-205ENST00000555648 USP50Q70EL3 339 aaPredicted RBP19.79■□□□□ 0.76
SNX6-205ENST00000555648 EYA3Q99504 573 aa19.79■□□□□ 0.76
SNX6-205ENST00000555648 PASKQ96RG2 1323 aa19.78■□□□□ 0.76
SNX6-205ENST00000555648 CEP350Q5VT06 3117 aa19.78■□□□□ 0.76
SNX6-205ENST00000555648 PI4KAP2A4QPH2 592 aa19.78■□□□□ 0.76
SNX6-205ENST00000555648 PDE8AO60658 829 aa19.78■□□□□ 0.76
SNX6-205ENST00000555648 RAD17O75943 681 aa19.78■□□□□ 0.76
SNX6-205ENST00000555648 IFFO2Q5TF58 517 aa19.78■□□□□ 0.76
SNX6-205ENST00000555648 PI4KAP1Q8N8J0 262 aa19.78■□□□□ 0.76
SNX6-205ENST00000555648 G3V3G9 751 aa19.77■□□□□ 0.76
SNX6-205ENST00000555648 ITGBL1O95965 494 aaPredicted RBP19.77■□□□□ 0.76
SNX6-205ENST00000555648 SLC4A2P04920 1241 aa19.77■□□□□ 0.76
SNX6-205ENST00000555648 DCAF8Q5TAQ9 597 aa19.77■□□□□ 0.76
SNX6-205ENST00000555648 WDR63Q8IWG1 891 aa19.77■□□□□ 0.76
SNX6-205ENST00000555648 JARID2Q92833 1246 aaPredicted RBP19.77■□□□□ 0.76
SNX6-205ENST00000555648 ADARB2Q9NS39 739 aaKnown RBP19.77■□□□□ 0.76
SNX6-205ENST00000555648 GPRC5DQ9NZD1 345 aa19.77■□□□□ 0.76
SNX6-205ENST00000555648 COL4A5P29400 1685 aa19.77■□□□□ 0.76
SNX6-205ENST00000555648 RIMBP2O15034 1052 aa19.76■□□□□ 0.75
SNX6-205ENST00000555648 GMPSP49915 693 aaPredicted RBP19.76■□□□□ 0.75
SNX6-205ENST00000555648 GPSM2P81274 684 aa19.76■□□□□ 0.75
SNX6-205ENST00000555648 FAM9BQ8IZU0 186 aa19.76■□□□□ 0.75
SNX6-205ENST00000555648 CCDC85AQ96PX6 553 aaPredicted RBP19.76■□□□□ 0.75
SNX6-205ENST00000555648 ANKIB1Q9P2G1 1089 aa19.76■□□□□ 0.75
SNX6-205ENST00000555648 HSPA1AP0DMV8 641 aaKnown RBP19.74■□□□□ 0.75
SNX6-205ENST00000555648 HSPA1BP0DMV9 641 aaKnown RBP19.74■□□□□ 0.75
SNX6-205ENST00000555648 ANKRD18AQ8IVF6 992 aa19.74■□□□□ 0.75
SNX6-205ENST00000555648 ZC3H12CQ9C0D7 883 aaKnown RBP19.74■□□□□ 0.75
SNX6-205ENST00000555648 SEC31BQ9NQW1 1179 aa19.74■□□□□ 0.75
SNX6-205ENST00000555648 ABT1Q9ULW3 272 aaKnown RBP19.74■□□□□ 0.75
SNX6-205ENST00000555648 CDHR2Q9BYE9 1310 aa19.74■□□□□ 0.75
SNX6-205ENST00000555648 FANCIQ9NVI1 1328 aa19.74■□□□□ 0.75
SNX6-205ENST00000555648 H7C1D1 291 aa19.73■□□□□ 0.75
SNX6-205ENST00000555648 FKBP5Q13451 457 aaPredicted RBP19.73■□□□□ 0.75
SNX6-205ENST00000555648 CDC5LQ99459 802 aaKnown RBP19.73■□□□□ 0.75
SNX6-205ENST00000555648 DBNDD1Q9H9R9 158 aa19.73■□□□□ 0.75
SNX6-205ENST00000555648 POLLQ9UGP5 575 aa19.73■□□□□ 0.75
SNX6-205ENST00000555648 UFL1O94874 794 aa19.72■□□□□ 0.75
SNX6-205ENST00000555648 FLIIQ13045 1269 aa19.72■□□□□ 0.75
SNX6-205ENST00000555648 MYH16Q9H6N6 1097 aa19.72■□□□□ 0.75
SNX6-205ENST00000555648 GGA1Q9UJY5 639 aa19.72■□□□□ 0.75
SNX6-205ENST00000555648 CNTNAP1P78357 1384 aa19.71■□□□□ 0.75
SNX6-205ENST00000555648 IGKV5-2P06315 115 aa19.71■□□□□ 0.75
SNX6-205ENST00000555648 CTSWP56202 376 aa19.71■□□□□ 0.75
SNX6-205ENST00000555648 DOK7Q18PE1 504 aa19.71■□□□□ 0.75
SNX6-205ENST00000555648 CWF19L2Q2TBE0 894 aaKnown RBP19.71■□□□□ 0.75
SNX6-205ENST00000555648 G2E3Q7L622 706 aa19.71■□□□□ 0.75
SNX6-205ENST00000555648 TBC1D16Q8TBP0 767 aa19.71■□□□□ 0.75
SNX6-205ENST00000555648 CNOT7Q9UIV1 285 aaKnown RBP19.71■□□□□ 0.75
SNX6-205ENST00000555648 YDJCA8MPS7 323 aa19.7■□□□□ 0.74
SNX6-205ENST00000555648 NEURL1BA8MQ27 555 aa19.7■□□□□ 0.74
SNX6-205ENST00000555648 ECE2O60344 883 aa19.7■□□□□ 0.74
SNX6-205ENST00000555648 EXOSC9Q06265 439 aaKnown RBP19.7■□□□□ 0.74
SNX6-205ENST00000555648 DEFB115Q30KQ5 88 aa19.7■□□□□ 0.74
SNX6-205ENST00000555648 LAMB2P55268 1798 aa19.7■□□□□ 0.74
SNX6-205ENST00000555648 PSMD14O00487 310 aa19.69■□□□□ 0.74
SNX6-205ENST00000555648 PAXIP1Q6ZW49 1069 aaPredicted RBP19.69■□□□□ 0.74
SNX6-205ENST00000555648 UBE3BQ7Z3V4 1068 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms