RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 C1QTNF8P60827 252 aa17.47■□□□□ 0.39
SNX6-203ENST00000555416 NEXNQ0ZGT2 675 aa17.47■□□□□ 0.39
SNX6-203ENST00000555416 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
SNX6-203ENST00000555416 CCDC85AQ96PX6 553 aaPredicted RBP17.47■□□□□ 0.39
SNX6-203ENST00000555416 PSMD1Q99460 953 aa17.47■□□□□ 0.39
SNX6-203ENST00000555416 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
SNX6-203ENST00000555416 GLTPD2A6NH11 291 aa17.46■□□□□ 0.39
SNX6-203ENST00000555416 H7C1W4 665 aa17.46■□□□□ 0.39
SNX6-203ENST00000555416 BBOX1O75936 387 aa17.46■□□□□ 0.39
SNX6-203ENST00000555416 GCKRQ14397 625 aa17.46■□□□□ 0.39
SNX6-203ENST00000555416 CC2D2BQ6DHV5 1058 aa17.46■□□□□ 0.39
SNX6-203ENST00000555416 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
SNX6-203ENST00000555416 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
SNX6-203ENST00000555416 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.39
SNX6-203ENST00000555416 RRAGCQ9HB90 399 aa17.46■□□□□ 0.39
SNX6-203ENST00000555416 CDHR2Q9BYE9 1310 aa17.46■□□□□ 0.38
SNX6-203ENST00000555416 PDE8AO60658 829 aa17.45■□□□□ 0.38
SNX6-203ENST00000555416 IARSP41252 1262 aaKnown RBP17.45■□□□□ 0.38
SNX6-203ENST00000555416 CASP7P55210 303 aa17.45■□□□□ 0.38
SNX6-203ENST00000555416 BEND3Q5T5X7 828 aa17.45■□□□□ 0.38
SNX6-203ENST00000555416 SP8Q8IXZ3 490 aa17.45■□□□□ 0.38
SNX6-203ENST00000555416 LINS1Q8NG48 757 aa17.45■□□□□ 0.38
SNX6-203ENST00000555416 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
SNX6-203ENST00000555416 POTECB2RU33 542 aa17.44■□□□□ 0.38
SNX6-203ENST00000555416 DUOX1Q9NRD9 1551 aa17.44■□□□□ 0.38
SNX6-203ENST00000555416 ZNF541Q9H0D2 1346 aa17.44■□□□□ 0.38
SNX6-203ENST00000555416 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
SNX6-203ENST00000555416 DDNO94850 711 aaPredicted RBP17.43■□□□□ 0.38
SNX6-203ENST00000555416 CTSWP56202 376 aa17.43■□□□□ 0.38
SNX6-203ENST00000555416 TTLL11Q8NHH1 800 aa17.42■□□□□ 0.38
SNX6-203ENST00000555416 RTFDC1Q9BY42 306 aaPredicted RBP17.42■□□□□ 0.38
SNX6-203ENST00000555416 RPS8P62241 208 aaKnown RBP17.41■□□□□ 0.38
SNX6-203ENST00000555416 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.38
SNX6-203ENST00000555416 AOC3Q16853 763 aa17.41■□□□□ 0.38
SNX6-203ENST00000555416 CCDC152Q4G0S7 254 aa17.41■□□□□ 0.38
SNX6-203ENST00000555416 MPNDQ8N594 471 aa17.41■□□□□ 0.38
SNX6-203ENST00000555416 GREM2Q9H772 168 aa17.41■□□□□ 0.38
SNX6-203ENST00000555416 FZD9O00144 591 aa17.4■□□□□ 0.38
SNX6-203ENST00000555416 GPSM2P81274 684 aa17.4■□□□□ 0.38
SNX6-203ENST00000555416 GRIPAP1Q4V328 841 aa17.4■□□□□ 0.38
SNX6-203ENST00000555416 SLC4A10Q6U841 1118 aa17.4■□□□□ 0.38
SNX6-203ENST00000555416 DPP8Q6V1X1 898 aaPredicted RBP17.4■□□□□ 0.38
SNX6-203ENST00000555416 WDR90Q96KV7 1748 aa17.4■□□□□ 0.38
SNX6-203ENST00000555416 LTBP1Q14766 1721 aa17.39■□□□□ 0.37
SNX6-203ENST00000555416 HSP90B1P14625 803 aaKnown RBP17.39■□□□□ 0.37
SNX6-203ENST00000555416 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.37
SNX6-203ENST00000555416 LARGE2Q8N3Y3 721 aa17.39■□□□□ 0.37
SNX6-203ENST00000555416 PLA2G12BQ9BX93 195 aa17.39■□□□□ 0.37
SNX6-203ENST00000555416 MYH3P11055 1940 aa17.39■□□□□ 0.37
SNX6-203ENST00000555416 PPIP5K2O43314 1243 aa17.38■□□□□ 0.37
SNX6-203ENST00000555416 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
SNX6-203ENST00000555416 TMC4Q7Z404 712 aa17.38■□□□□ 0.37
SNX6-203ENST00000555416 GPR101Q96P66 508 aaPredicted RBP17.38■□□□□ 0.37
SNX6-203ENST00000555416 SMC4Q9NTJ3 1288 aa17.38■□□□□ 0.37
SNX6-203ENST00000555416 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
SNX6-203ENST00000555416 WTIPA6NIX2 430 aaPredicted RBP17.37■□□□□ 0.37
SNX6-203ENST00000555416 TOMM70O94826 608 aa17.37■□□□□ 0.37
SNX6-203ENST00000555416 VEGFAP15692 232 aaPredicted RBP17.37■□□□□ 0.37
SNX6-203ENST00000555416 FOXO4P98177 505 aa17.37■□□□□ 0.37
SNX6-203ENST00000555416 FAM161AQ3B820 660 aa17.37■□□□□ 0.37
SNX6-203ENST00000555416 ALDH1L2Q3SY69 923 aa17.37■□□□□ 0.37
SNX6-203ENST00000555416 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
SNX6-203ENST00000555416 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
SNX6-203ENST00000555416 NSFL1CQ9UNZ2 370 aaKnown RBP17.37■□□□□ 0.37
SNX6-203ENST00000555416 GRM8O00222 908 aa17.36■□□□□ 0.37
SNX6-203ENST00000555416 ALDH1L1O75891 902 aa17.36■□□□□ 0.37
SNX6-203ENST00000555416 CSF1RP07333 972 aa17.36■□□□□ 0.37
SNX6-203ENST00000555416 KIAA2012Q0VF49 1180 aa17.36■□□□□ 0.37
SNX6-203ENST00000555416 ANKRD18AQ8IVF6 992 aa17.36■□□□□ 0.37
SNX6-203ENST00000555416 SRCIN1Q9C0H9 1055 aa17.36■□□□□ 0.37
SNX6-203ENST00000555416 RTL9Q8NET4 1388 aa17.36■□□□□ 0.37
SNX6-203ENST00000555416 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
SNX6-203ENST00000555416 RARSP54136 660 aaKnown RBP17.35■□□□□ 0.37
SNX6-203ENST00000555416 L3MBTL3Q96JM7 780 aaPredicted RBP17.35■□□□□ 0.37
SNX6-203ENST00000555416 PTPRCP08575 1304 aa17.35■□□□□ 0.37
SNX6-203ENST00000555416 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
SNX6-203ENST00000555416 NBPF7P0C2Y1 421 aaPredicted RBP17.34■□□□□ 0.37
SNX6-203ENST00000555416 POTEIP0CG38 1075 aa17.34■□□□□ 0.37
SNX6-203ENST00000555416 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
SNX6-203ENST00000555416 ITGA6P23229 1130 aa17.34■□□□□ 0.37
SNX6-203ENST00000555416 NIM1KQ8IY84 436 aa17.34■□□□□ 0.37
SNX6-203ENST00000555416 SUPT20HQ8NEM7 779 aa17.34■□□□□ 0.37
SNX6-203ENST00000555416 TBC1D16Q8TBP0 767 aa17.34■□□□□ 0.37
SNX6-203ENST00000555416 RBM46Q8TBY0 533 aaKnown RBP17.34■□□□□ 0.37
SNX6-203ENST00000555416 KAZALD1Q96I82 304 aa17.34■□□□□ 0.37
SNX6-203ENST00000555416 YDJCA8MPS7 323 aa17.33■□□□□ 0.36
SNX6-203ENST00000555416 C6orf229H3BNL8 230 aa17.33■□□□□ 0.36
SNX6-203ENST00000555416 RIMBP2O15034 1052 aa17.33■□□□□ 0.36
SNX6-203ENST00000555416 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
SNX6-203ENST00000555416 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
SNX6-203ENST00000555416 CDC5LQ99459 802 aaKnown RBP17.33■□□□□ 0.36
SNX6-203ENST00000555416 VPS33BQ9H267 617 aa17.33■□□□□ 0.36
SNX6-203ENST00000555416 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.36
SNX6-203ENST00000555416 C9orf78Q9NZ63 289 aaPredicted RBP17.33■□□□□ 0.36
SNX6-203ENST00000555416 NOB1Q9ULX3 412 aaKnown RBP17.33■□□□□ 0.36
SNX6-203ENST00000555416 MINPP1Q9UNW1 487 aa17.33■□□□□ 0.36
SNX6-203ENST00000555416 GJA3Q9Y6H8 435 aa17.33■□□□□ 0.36
SNX6-203ENST00000555416 BRPF1P55201 1214 aaPredicted RBP17.32■□□□□ 0.36
SNX6-203ENST00000555416 EIF6P56537 245 aaKnown RBP17.32■□□□□ 0.36
SNX6-203ENST00000555416 CXCL9Q07325 125 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms