RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ADARB2Q9NS39 739 aaKnown RBP13.95□□□□□ -0.18
SRP54-205ENST00000554803 GSE1Q14687 1217 aa13.94□□□□□ -0.18
SRP54-205ENST00000554803 NFE2L2Q16236 605 aa13.94□□□□□ -0.18
SRP54-205ENST00000554803 CLEC4GQ6UXB4 293 aa13.94□□□□□ -0.18
SRP54-205ENST00000554803 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
SRP54-205ENST00000554803 RWDD1Q9H446 243 aaPredicted RBP13.94□□□□□ -0.18
SRP54-205ENST00000554803 SAGE1Q9NXZ1 904 aa13.94□□□□□ -0.18
SRP54-205ENST00000554803 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
SRP54-205ENST00000554803 MTHFSDQ2M296 383 aaKnown RBP13.93□□□□□ -0.18
SRP54-205ENST00000554803 CC2D2BQ6DHV5 1058 aa13.93□□□□□ -0.18
SRP54-205ENST00000554803 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
SRP54-205ENST00000554803 GLIS2Q9BZE0 524 aaPredicted RBP13.93□□□□□ -0.18
SRP54-205ENST00000554803 A1BGP04217 495 aa13.92□□□□□ -0.18
SRP54-205ENST00000554803 RARSP54136 660 aaKnown RBP13.92□□□□□ -0.18
SRP54-205ENST00000554803 RIPK4P57078 832 aa13.92□□□□□ -0.18
SRP54-205ENST00000554803 ZNF790Q6PG37 636 aa13.92□□□□□ -0.18
SRP54-205ENST00000554803 TPTE2Q6XPS3 522 aa13.92□□□□□ -0.18
SRP54-205ENST00000554803 LARGE2Q8N3Y3 721 aa13.92□□□□□ -0.18
SRP54-205ENST00000554803 CHMP4BQ9H444 224 aaKnown RBP13.92□□□□□ -0.18
SRP54-205ENST00000554803 GPRC5DQ9NZD1 345 aa13.92□□□□□ -0.18
SRP54-205ENST00000554803 PGAP2Q9UHJ9 254 aa13.92□□□□□ -0.18
SRP54-205ENST00000554803 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
SRP54-205ENST00000554803 NUP98P52948 1817 aa13.92□□□□□ -0.18
SRP54-205ENST00000554803 NFKBIBQ15653 356 aa13.91□□□□□ -0.18
SRP54-205ENST00000554803 CTU1Q7Z7A3 348 aaKnown RBP13.91□□□□□ -0.18
SRP54-205ENST00000554803 NBPF15Q8N660 670 aa13.91□□□□□ -0.18
SRP54-205ENST00000554803 ZNF408Q9H9D4 720 aa13.91□□□□□ -0.18
SRP54-205ENST00000554803 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
SRP54-205ENST00000554803 LAS1LQ9Y4W2 734 aaKnown RBP13.9□□□□□ -0.18
SRP54-205ENST00000554803 BCAR3O75815 825 aa13.89□□□□□ -0.19
SRP54-205ENST00000554803 HUNKP57058 714 aa13.89□□□□□ -0.19
SRP54-205ENST00000554803 CRY2Q49AN0 593 aa13.89□□□□□ -0.19
SRP54-205ENST00000554803 GRIPAP1Q4V328 841 aa13.89□□□□□ -0.19
SRP54-205ENST00000554803 HABP4Q5JVS0 413 aaKnown RBP13.89□□□□□ -0.19
SRP54-205ENST00000554803 ZC3H15Q8WU90 426 aaKnown RBP13.89□□□□□ -0.19
SRP54-205ENST00000554803 THUMPD2Q9BTF0 503 aaKnown RBP13.89□□□□□ -0.19
SRP54-205ENST00000554803 FAM155AB1AL88 458 aaPredicted RBP13.88□□□□□ -0.19
SRP54-205ENST00000554803 RGL2O15211 777 aa13.88□□□□□ -0.19
SRP54-205ENST00000554803 DCTN1Q14203 1278 aa13.88□□□□□ -0.19
SRP54-205ENST00000554803 CDC37L1Q7L3B6 337 aa13.88□□□□□ -0.19
SRP54-205ENST00000554803 NIM1KQ8IY84 436 aa13.88□□□□□ -0.19
SRP54-205ENST00000554803 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
SRP54-205ENST00000554803 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
SRP54-205ENST00000554803 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
SRP54-205ENST00000554803 RNF186Q9NXI6 227 aa13.88□□□□□ -0.19
SRP54-205ENST00000554803 HPS5Q9UPZ3 1129 aa13.88□□□□□ -0.19
SRP54-205ENST00000554803 NIP7Q9Y221 180 aaKnown RBP eCLIP13.88□□□□□ -0.19
SRP54-205ENST00000554803 CDHR2Q9BYE9 1310 aa13.88□□□□□ -0.19
SRP54-205ENST00000554803 TRPA1O75762 1119 aa13.87□□□□□ -0.19
SRP54-205ENST00000554803 TEFQ10587 303 aa13.87□□□□□ -0.19
SRP54-205ENST00000554803 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
SRP54-205ENST00000554803 RGMBQ6NW40 437 aa13.87□□□□□ -0.19
SRP54-205ENST00000554803 CEP290O15078 2479 aa13.87□□□□□ -0.19
SRP54-205ENST00000554803 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
SRP54-205ENST00000554803 RGS3P49796 1198 aa13.86□□□□□ -0.19
SRP54-205ENST00000554803 HIRAP54198 1017 aaPredicted RBP13.86□□□□□ -0.19
SRP54-205ENST00000554803 KIF23Q02241 960 aaPredicted RBP13.86□□□□□ -0.19
SRP54-205ENST00000554803 MCM10Q7L590 875 aa13.86□□□□□ -0.19
SRP54-205ENST00000554803 RIC1Q4ADV7 1423 aa13.86□□□□□ -0.19
SRP54-205ENST00000554803 KIF16BQ96L93 1317 aa13.86□□□□□ -0.19
SRP54-205ENST00000554803 ABCC12Q96J65 1359 aa13.85□□□□□ -0.19
SRP54-205ENST00000554803 MKI67P46013 3256 aaKnown RBP13.85□□□□□ -0.19
SRP54-205ENST00000554803 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
SRP54-205ENST00000554803 IPO8O15397 1037 aaKnown RBP13.85□□□□□ -0.19
SRP54-205ENST00000554803 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
SRP54-205ENST00000554803 GMPSP49915 693 aaPredicted RBP13.85□□□□□ -0.19
SRP54-205ENST00000554803 CALD1Q05682 793 aaKnown RBP13.85□□□□□ -0.19
SRP54-205ENST00000554803 CXCL9Q07325 125 aa13.85□□□□□ -0.19
SRP54-205ENST00000554803 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
SRP54-205ENST00000554803 MVPQ14764 893 aaKnown RBP13.85□□□□□ -0.19
SRP54-205ENST00000554803 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
SRP54-205ENST00000554803 CUL9Q8IWT3 2517 aa13.85□□□□□ -0.19
SRP54-205ENST00000554803 KIAA0100Q14667 2235 aaKnown RBP13.84□□□□□ -0.19
SRP54-205ENST00000554803 GNAT3A8MTJ3 354 aa13.84□□□□□ -0.19
SRP54-205ENST00000554803 PPIP5K2O43314 1243 aa13.84□□□□□ -0.19
SRP54-205ENST00000554803 IGHDP01880 384 aa13.84□□□□□ -0.19
SRP54-205ENST00000554803 GTF2E1P29083 439 aaPredicted RBP13.84□□□□□ -0.19
SRP54-205ENST00000554803 HOXA10P31260 410 aaPredicted RBP13.84□□□□□ -0.19
SRP54-205ENST00000554803 PKN2Q16513 984 aaKnown RBP13.84□□□□□ -0.19
SRP54-205ENST00000554803 IL17REQ8NFR9 667 aa13.84□□□□□ -0.19
SRP54-205ENST00000554803 CCDC102AQ96A19 550 aa13.84□□□□□ -0.19
SRP54-205ENST00000554803 VPS33BQ9H267 617 aa13.84□□□□□ -0.19
SRP54-205ENST00000554803 USP16Q9Y5T5 823 aa13.84□□□□□ -0.19
SRP54-205ENST00000554803 RBBP6Q7Z6E9 1792 aaKnown RBP13.83□□□□□ -0.19
SRP54-205ENST00000554803 LMOD3Q0VAK6 560 aa13.83□□□□□ -0.2
SRP54-205ENST00000554803 AOC3Q16853 763 aa13.83□□□□□ -0.2
SRP54-205ENST00000554803 USP48Q86UV5 1035 aa13.83□□□□□ -0.2
SRP54-205ENST00000554803 SLC51AQ86UW1 340 aa13.83□□□□□ -0.2
SRP54-205ENST00000554803 TRPM4Q8TD43 1214 aa13.83□□□□□ -0.2
SRP54-205ENST00000554803 ZNRF3Q9ULT6 936 aa13.83□□□□□ -0.2
SRP54-205ENST00000554803 COG6Q9Y2V7 657 aa13.83□□□□□ -0.2
SRP54-205ENST00000554803 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.2
SRP54-205ENST00000554803 TRIOBPQ9H2D6 2365 aa13.82□□□□□ -0.2
SRP54-205ENST00000554803 ALDH1L2Q3SY69 923 aa13.82□□□□□ -0.2
SRP54-205ENST00000554803 FTSJ3Q8IY81 847 aaKnown RBP13.82□□□□□ -0.2
SRP54-205ENST00000554803 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
SRP54-205ENST00000554803 RPGRQ92834 1020 aaKnown RBP13.82□□□□□ -0.2
SRP54-205ENST00000554803 TBC1D32Q96NH3 1257 aa13.82□□□□□ -0.2
SRP54-205ENST00000554803 CSRNP1Q96S65 589 aa13.82□□□□□ -0.2
SRP54-205ENST00000554803 GBA2Q9HCG7 927 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms