RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 ABT1Q9ULW3 272 aaKnown RBP28.98■■■□□ 2.23
GABRB3-206ENST00000554556 ADAMTS8Q9UP79 889 aa28.98■■■□□ 2.23
GABRB3-206ENST00000554556 ANKRD13DQ6ZTN6 518 aa28.97■■■□□ 2.23
GABRB3-206ENST00000554556 CTCFP49711 727 aaPredicted RBP28.96■■■□□ 2.23
GABRB3-206ENST00000554556 CXCL9Q07325 125 aa28.96■■■□□ 2.23
GABRB3-206ENST00000554556 PRDM10Q9NQV6 1147 aa28.96■■■□□ 2.23
GABRB3-206ENST00000554556 ADARB2Q9NS39 739 aaKnown RBP28.96■■■□□ 2.23
GABRB3-206ENST00000554556 GPRC5DQ9NZD1 345 aa28.96■■■□□ 2.23
GABRB3-206ENST00000554556 CFAP44Q96MT7 982 aa28.95■■■□□ 2.22
GABRB3-206ENST00000554556 KIAA2012Q0VF49 1180 aa28.94■■■□□ 2.22
GABRB3-206ENST00000554556 HYPKQ9NX55 129 aa28.94■■■□□ 2.22
GABRB3-206ENST00000554556 TNIP1Q15025 636 aa28.93■■■□□ 2.22
GABRB3-206ENST00000554556 CIAPIN1Q6FI81 312 aa28.93■■■□□ 2.22
GABRB3-206ENST00000554556 WBP1LQ9NX94 342 aa28.93■■■□□ 2.22
GABRB3-206ENST00000554556 TRPM7Q96QT4 1865 aa28.93■■■□□ 2.22
GABRB3-206ENST00000554556 WDR33Q9C0J8 1336 aaKnown RBP28.93■■■□□ 2.22
GABRB3-206ENST00000554556 ISCA1Q9BUE6 129 aa28.92■■■□□ 2.22
GABRB3-206ENST00000554556 TAF1P21675 1872 aa28.91■■■□□ 2.22
GABRB3-206ENST00000554556 DUSP27Q5VZP5 1158 aa28.91■■■□□ 2.22
GABRB3-206ENST00000554556 BCL2L13Q9BXK5 485 aa28.91■■■□□ 2.22
GABRB3-206ENST00000554556 MAP2K1Q02750 393 aaPredicted RBP28.9■■■□□ 2.22
GABRB3-206ENST00000554556 CDHR2Q9BYE9 1310 aa28.9■■■□□ 2.22
GABRB3-206ENST00000554556 ECE1P42892 770 aa28.89■■■□□ 2.22
GABRB3-206ENST00000554556 GMPSP49915 693 aaPredicted RBP28.89■■■□□ 2.22
GABRB3-206ENST00000554556 SF3B3Q15393 1217 aaKnown RBP28.89■■■□□ 2.22
GABRB3-206ENST00000554556 FAM89AQ96GI7 184 aa28.89■■■□□ 2.22
GABRB3-206ENST00000554556 ATP5J2-PTCD1G3V325 749 aa28.88■■■□□ 2.21
GABRB3-206ENST00000554556 DDX60Q8IY21 1712 aaKnown RBP28.87■■■□□ 2.21
GABRB3-206ENST00000554556 RAD17O75943 681 aa28.87■■■□□ 2.21
GABRB3-206ENST00000554556 CALD1Q05682 793 aaKnown RBP28.87■■■□□ 2.21
GABRB3-206ENST00000554556 TRIM28Q13263 835 aaKnown RBP28.87■■■□□ 2.21
GABRB3-206ENST00000554556 ZNF428Q96B54 188 aa28.87■■■□□ 2.21
GABRB3-206ENST00000554556 MBIPQ9NS73 344 aa28.87■■■□□ 2.21
GABRB3-206ENST00000554556 FMR1Q06787 632 aaKnown RBP eCLIP28.86■■■□□ 2.21
GABRB3-206ENST00000554556 PAXIP1Q6ZW49 1069 aaPredicted RBP28.86■■■□□ 2.21
GABRB3-206ENST00000554556 PRKRIP1Q9H875 184 aaPredicted RBP28.86■■■□□ 2.21
GABRB3-206ENST00000554556 TRAF5O00463 557 aa28.85■■■□□ 2.21
GABRB3-206ENST00000554556 CST9Q5W186 159 aa28.85■■■□□ 2.21
GABRB3-206ENST00000554556 RIC3Q7Z5B4 369 aa28.85■■■□□ 2.21
GABRB3-206ENST00000554556 NSFL1CQ9UNZ2 370 aaKnown RBP28.85■■■□□ 2.21
GABRB3-206ENST00000554556 HSP90B1P14625 803 aaKnown RBP28.84■■■□□ 2.21
GABRB3-206ENST00000554556 LBX1P52954 281 aa28.84■■■□□ 2.21
GABRB3-206ENST00000554556 WASHC4Q2M389 1173 aa28.84■■■□□ 2.21
GABRB3-206ENST00000554556 ZC3H15Q8WU90 426 aaKnown RBP28.84■■■□□ 2.21
GABRB3-206ENST00000554556 CAPNS2Q96L46 248 aa28.84■■■□□ 2.21
GABRB3-206ENST00000554556 PGAP2Q9UHJ9 254 aa28.84■■■□□ 2.21
GABRB3-206ENST00000554556 LRRC37AA6NMS7 1700 aa28.83■■■□□ 2.21
GABRB3-206ENST00000554556 H7C1D1 291 aa28.83■■■□□ 2.21
GABRB3-206ENST00000554556 ZNF853P0CG23 659 aa28.83■■■□□ 2.21
GABRB3-206ENST00000554556 GNAI1P63096 354 aa28.83■■■□□ 2.21
GABRB3-206ENST00000554556 GOLGA2Q08379 1002 aa28.83■■■□□ 2.21
GABRB3-206ENST00000554556 CELF1Q92879 486 aaKnown RBP28.83■■■□□ 2.21
GABRB3-206ENST00000554556 IFT57Q9NWB7 429 aa28.83■■■□□ 2.21
GABRB3-206ENST00000554556 CNOT7Q9UIV1 285 aaKnown RBP28.83■■■□□ 2.21
GABRB3-206ENST00000554556 TLL2Q9Y6L7 1015 aa28.83■■■□□ 2.21
GABRB3-206ENST00000554556 IRS4O14654 1257 aaPredicted RBP28.82■■■□□ 2.2
GABRB3-206ENST00000554556 APAF1O14727 1248 aa28.82■■■□□ 2.2
GABRB3-206ENST00000554556 RTL5Q5HYW3 569 aaPredicted RBP28.82■■■□□ 2.2
GABRB3-206ENST00000554556 BEGAINQ9BUH8 593 aa28.82■■■□□ 2.2
GABRB3-206ENST00000554556 CHMP4AQ9BY43 222 aa28.82■■■□□ 2.2
GABRB3-206ENST00000554556 YDJCA8MPS7 323 aa28.81■■■□□ 2.2
GABRB3-206ENST00000554556 C6orf229H3BNL8 230 aa28.81■■■□□ 2.2
GABRB3-206ENST00000554556 EYA3Q99504 573 aa28.81■■■□□ 2.2
GABRB3-206ENST00000554556 CYP4F22Q6NT55 531 aa28.8■■■□□ 2.2
GABRB3-206ENST00000554556 GPR101Q96P66 508 aaPredicted RBP28.8■■■□□ 2.2
GABRB3-206ENST00000554556 DUOX1Q9NRD9 1551 aa28.79■■■□□ 2.2
GABRB3-206ENST00000554556 CELF2O95319 508 aaKnown RBP28.79■■■□□ 2.2
GABRB3-206ENST00000554556 HSPA8P11142 646 aaKnown RBP28.79■■■□□ 2.2
GABRB3-206ENST00000554556 RPS8P62241 208 aaKnown RBP28.79■■■□□ 2.2
GABRB3-206ENST00000554556 GRM1Q13255 1194 aa28.79■■■□□ 2.2
GABRB3-206ENST00000554556 CDC37L1Q7L3B6 337 aa28.79■■■□□ 2.2
GABRB3-206ENST00000554556 ZBTB38Q8NAP3 1195 aaPredicted RBP28.79■■■□□ 2.2
GABRB3-206ENST00000554556 DPF2Q92785 391 aa28.79■■■□□ 2.2
GABRB3-206ENST00000554556 GLIS2Q9BZE0 524 aaPredicted RBP28.78■■■□□ 2.2
GABRB3-206ENST00000554556 ELL2O00472 640 aaPredicted RBP28.77■■■□□ 2.2
GABRB3-206ENST00000554556 RIMBP2O15034 1052 aa28.77■■■□□ 2.2
GABRB3-206ENST00000554556 HIRAP54198 1017 aaPredicted RBP28.77■■■□□ 2.2
GABRB3-206ENST00000554556 GPSM2P81274 684 aa28.77■■■□□ 2.2
GABRB3-206ENST00000554556 MICALL2Q8IY33 904 aa28.77■■■□□ 2.2
GABRB3-206ENST00000554556 PHAXQ9H814 394 aaKnown RBP28.77■■■□□ 2.2
GABRB3-206ENST00000554556 DBNDD1Q9H9R9 158 aa28.77■■■□□ 2.2
GABRB3-206ENST00000554556 MAP2K2P36507 400 aa28.76■■■□□ 2.19
GABRB3-206ENST00000554556 TRPM4Q8TD43 1214 aa28.76■■■□□ 2.19
GABRB3-206ENST00000554556 POLLQ9UGP5 575 aa28.76■■■□□ 2.19
GABRB3-206ENST00000554556 PSMD14O00487 310 aa28.75■■■□□ 2.19
GABRB3-206ENST00000554556 SAPCD2Q86UD0 394 aa28.75■■■□□ 2.19
GABRB3-206ENST00000554556 CCDC191Q8NCU4 936 aa28.75■■■□□ 2.19
GABRB3-206ENST00000554556 HHIPL1Q96JK4 782 aa28.75■■■□□ 2.19
GABRB3-206ENST00000554556 MYD88Q99836 296 aa28.75■■■□□ 2.19
GABRB3-206ENST00000554556 ZBTB12Q9Y330 459 aaPredicted RBP28.75■■■□□ 2.19
GABRB3-206ENST00000554556 THSD7BQ9C0I4 1608 aa28.74■■■□□ 2.19
GABRB3-206ENST00000554556 DDX58O95786 925 aaKnown RBP28.74■■■□□ 2.19
GABRB3-206ENST00000554556 RPS12P25398 132 aaKnown RBP28.74■■■□□ 2.19
GABRB3-206ENST00000554556 CCDC30Q5VVM6 783 aa28.73■■■□□ 2.19
GABRB3-206ENST00000554556 ZC3H12CQ9C0D7 883 aaKnown RBP28.73■■■□□ 2.19
GABRB3-206ENST00000554556 ZNF408Q9H9D4 720 aa28.73■■■□□ 2.19
GABRB3-206ENST00000554556 G3V3G9 751 aa28.72■■■□□ 2.19
GABRB3-206ENST00000554556 ECE2O60344 883 aa28.72■■■□□ 2.19
GABRB3-206ENST00000554556 PCCAP05165 728 aaPredicted RBP28.72■■■□□ 2.19
GABRB3-206ENST00000554556 CCDC152Q4G0S7 254 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms