RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 GRAPLQ8TC17 118 aaPredicted RBP28.4■■■□□ 2.14
RCCD1-202ENST00000554302 CLEC11AQ9Y240 323 aa28.4■■■□□ 2.14
RCCD1-202ENST00000554302 GNAI1P63096 354 aa28.39■■■□□ 2.14
RCCD1-202ENST00000554302 CALD1Q05682 793 aaKnown RBP28.39■■■□□ 2.14
RCCD1-202ENST00000554302 TRIM28Q13263 835 aaKnown RBP28.39■■■□□ 2.14
RCCD1-202ENST00000554302 COL13A1Q5TAT6 717 aaPredicted RBP28.39■■■□□ 2.14
RCCD1-202ENST00000554302 CNTNAP1P78357 1384 aa28.38■■■□□ 2.13
RCCD1-202ENST00000554302 HSPA1AP0DMV8 641 aaKnown RBP28.38■■■□□ 2.13
RCCD1-202ENST00000554302 HSPA1BP0DMV9 641 aaKnown RBP28.38■■■□□ 2.13
RCCD1-202ENST00000554302 CNTROBQ8N137 903 aa28.38■■■□□ 2.13
RCCD1-202ENST00000554302 MKRN1Q9UHC7 482 aaKnown RBP28.38■■■□□ 2.13
RCCD1-202ENST00000554302 TMEM88BA6NKF7 163 aa28.37■■■□□ 2.13
RCCD1-202ENST00000554302 SF3B3Q15393 1217 aaKnown RBP28.37■■■□□ 2.13
RCCD1-202ENST00000554302 MAP1SQ66K74 1059 aaPredicted RBP28.37■■■□□ 2.13
RCCD1-202ENST00000554302 DPP8Q6V1X1 898 aaPredicted RBP28.37■■■□□ 2.13
RCCD1-202ENST00000554302 TMC4Q7Z404 712 aa28.37■■■□□ 2.13
RCCD1-202ENST00000554302 MPNDQ8N594 471 aa28.37■■■□□ 2.13
RCCD1-202ENST00000554302 LRRC37AA6NMS7 1700 aa28.37■■■□□ 2.13
RCCD1-202ENST00000554302 TAF1P21675 1872 aa28.36■■■□□ 2.13
RCCD1-202ENST00000554302 ATP5J2-PTCD1G3V325 749 aa28.36■■■□□ 2.13
RCCD1-202ENST00000554302 LMOD1P29536 600 aaPredicted RBP28.36■■■□□ 2.13
RCCD1-202ENST00000554302 EPS15P42566 896 aa28.36■■■□□ 2.13
RCCD1-202ENST00000554302 FAM89AQ96GI7 184 aa28.36■■■□□ 2.13
RCCD1-202ENST00000554302 ZNRF3Q9ULT6 936 aa28.36■■■□□ 2.13
RCCD1-202ENST00000554302 KIAA2012Q0VF49 1180 aa28.35■■■□□ 2.13
RCCD1-202ENST00000554302 ZNF428Q96B54 188 aa28.35■■■□□ 2.13
RCCD1-202ENST00000554302 DUOX1Q9NRD9 1551 aa28.35■■■□□ 2.13
RCCD1-202ENST00000554302 CXCL9Q07325 125 aa28.34■■■□□ 2.13
RCCD1-202ENST00000554302 USP50Q70EL3 339 aaPredicted RBP28.33■■■□□ 2.13
RCCD1-202ENST00000554302 PHAXQ9H814 394 aaKnown RBP28.33■■■□□ 2.13
RCCD1-202ENST00000554302 C8orf58Q8NAV2 365 aa28.32■■■□□ 2.12
RCCD1-202ENST00000554302 GPRC5DQ9NZD1 345 aa28.31■■■□□ 2.12
RCCD1-202ENST00000554302 COL4A1P02462 1669 aa28.3■■■□□ 2.12
RCCD1-202ENST00000554302 ELL2O00472 640 aaPredicted RBP28.3■■■□□ 2.12
RCCD1-202ENST00000554302 RIC3Q7Z5B4 369 aa28.3■■■□□ 2.12
RCCD1-202ENST00000554302 CELF1Q92879 486 aaKnown RBP28.3■■■□□ 2.12
RCCD1-202ENST00000554302 IRS4O14654 1257 aaPredicted RBP28.29■■■□□ 2.12
RCCD1-202ENST00000554302 GOLGA2Q08379 1002 aa28.29■■■□□ 2.12
RCCD1-202ENST00000554302 CCDC184Q52MB2 194 aa28.29■■■□□ 2.12
RCCD1-202ENST00000554302 RASSF10A6NK89 507 aa28.28■■■□□ 2.12
RCCD1-202ENST00000554302 ZBTB38Q8NAP3 1195 aaPredicted RBP28.28■■■□□ 2.12
RCCD1-202ENST00000554302 ADARB2Q9NS39 739 aaKnown RBP28.28■■■□□ 2.12
RCCD1-202ENST00000554302 CDHR2Q9BYE9 1310 aa28.27■■■□□ 2.12
RCCD1-202ENST00000554302 VEGFBP49765 207 aa28.27■■■□□ 2.12
RCCD1-202ENST00000554302 CIAPIN1Q6FI81 312 aa28.27■■■□□ 2.12
RCCD1-202ENST00000554302 CCDC27Q2M243 656 aa28.26■■■□□ 2.11
RCCD1-202ENST00000554302 RTL5Q5HYW3 569 aaPredicted RBP28.26■■■□□ 2.11
RCCD1-202ENST00000554302 CHMP4AQ9BY43 222 aa28.26■■■□□ 2.11
RCCD1-202ENST00000554302 YDJCA8MPS7 323 aa28.25■■■□□ 2.11
RCCD1-202ENST00000554302 GMPSP49915 693 aaPredicted RBP28.25■■■□□ 2.11
RCCD1-202ENST00000554302 CCDC191Q8NCU4 936 aa28.25■■■□□ 2.11
RCCD1-202ENST00000554302 TNIP1Q15025 636 aa28.24■■■□□ 2.11
RCCD1-202ENST00000554302 CCDC30Q5VVM6 783 aa28.24■■■□□ 2.11
RCCD1-202ENST00000554302 TSPYL6Q8N831 410 aa28.24■■■□□ 2.11
RCCD1-202ENST00000554302 MYD88Q99836 296 aa28.24■■■□□ 2.11
RCCD1-202ENST00000554302 RAD17O75943 681 aa28.23■■■□□ 2.11
RCCD1-202ENST00000554302 DEFB115Q30KQ5 88 aa28.23■■■□□ 2.11
RCCD1-202ENST00000554302 PGAP2Q9UHJ9 254 aa28.23■■■□□ 2.11
RCCD1-202ENST00000554302 NSFL1CQ9UNZ2 370 aaKnown RBP28.23■■■□□ 2.11
RCCD1-202ENST00000554302 PCCAP05165 728 aaPredicted RBP28.22■■■□□ 2.11
RCCD1-202ENST00000554302 RPS8P62241 208 aaKnown RBP28.22■■■□□ 2.11
RCCD1-202ENST00000554302 FMR1Q06787 632 aaKnown RBP eCLIP28.22■■■□□ 2.11
RCCD1-202ENST00000554302 WASHC4Q2M389 1173 aa28.22■■■□□ 2.11
RCCD1-202ENST00000554302 METTL22Q9BUU2 404 aaPredicted RBP28.22■■■□□ 2.11
RCCD1-202ENST00000554302 POLLQ9UGP5 575 aa28.22■■■□□ 2.11
RCCD1-202ENST00000554302 HSP90B1P14625 803 aaKnown RBP28.21■■■□□ 2.11
RCCD1-202ENST00000554302 GPSM2P81274 684 aa28.21■■■□□ 2.11
RCCD1-202ENST00000554302 TNS4Q8IZW8 715 aa28.21■■■□□ 2.11
RCCD1-202ENST00000554302 FOXN1O15353 648 aa28.19■■■□□ 2.1
RCCD1-202ENST00000554302 DDX58O95786 925 aaKnown RBP28.19■■■□□ 2.1
RCCD1-202ENST00000554302 CST9Q5W186 159 aa28.19■■■□□ 2.1
RCCD1-202ENST00000554302 WWC1Q8IX03 1113 aa28.19■■■□□ 2.1
RCCD1-202ENST00000554302 TSR2Q969E8 191 aaKnown RBP28.19■■■□□ 2.1
RCCD1-202ENST00000554302 CWC25Q9NXE8 425 aaPredicted RBP28.19■■■□□ 2.1
RCCD1-202ENST00000554302 TRPM7Q96QT4 1865 aa28.19■■■□□ 2.1
RCCD1-202ENST00000554302 TRAF5O00463 557 aa28.18■■■□□ 2.1
RCCD1-202ENST00000554302 MYCNP04198 464 aaPredicted RBP28.18■■■□□ 2.1
RCCD1-202ENST00000554302 HIRAP54198 1017 aaPredicted RBP28.18■■■□□ 2.1
RCCD1-202ENST00000554302 ZC3H15Q8WU90 426 aaKnown RBP28.18■■■□□ 2.1
RCCD1-202ENST00000554302 BCL2L13Q9BXK5 485 aa28.18■■■□□ 2.1
RCCD1-202ENST00000554302 SEC31BQ9NQW1 1179 aa28.18■■■□□ 2.1
RCCD1-202ENST00000554302 PODXL2Q9NZ53 605 aa28.18■■■□□ 2.1
RCCD1-202ENST00000554302 PDE8AO60658 829 aa28.17■■■□□ 2.1
RCCD1-202ENST00000554302 TBC1D16Q8TBP0 767 aa28.17■■■□□ 2.1
RCCD1-202ENST00000554302 DPF2Q92785 391 aa28.17■■■□□ 2.1
RCCD1-202ENST00000554302 WBP1LQ9NX94 342 aa28.17■■■□□ 2.1
RCCD1-202ENST00000554302 ABT1Q9ULW3 272 aaKnown RBP28.17■■■□□ 2.1
RCCD1-202ENST00000554302 WDR33Q9C0J8 1336 aaKnown RBP28.17■■■□□ 2.1
RCCD1-202ENST00000554302 C6orf229H3BNL8 230 aa28.16■■■□□ 2.1
RCCD1-202ENST00000554302 KSR2Q6VAB6 950 aa28.16■■■□□ 2.1
RCCD1-202ENST00000554302 CNOT7Q9UIV1 285 aaKnown RBP28.16■■■□□ 2.1
RCCD1-202ENST00000554302 MAP3K2Q9Y2U5 619 aa28.16■■■□□ 2.1
RCCD1-202ENST00000554302 IL16Q14005 1332 aa28.16■■■□□ 2.1
RCCD1-202ENST00000554302 CCDC152Q4G0S7 254 aa28.15■■■□□ 2.1
RCCD1-202ENST00000554302 EYA3Q99504 573 aa28.15■■■□□ 2.1
RCCD1-202ENST00000554302 DBNDD1Q9H9R9 158 aa28.15■■■□□ 2.1
RCCD1-202ENST00000554302 THSD7BQ9C0I4 1608 aa28.14■■■□□ 2.1
RCCD1-202ENST00000554302 PI4KAP2A4QPH2 592 aa28.14■■■□□ 2.1
RCCD1-202ENST00000554302 PSMD14O00487 310 aa28.14■■■□□ 2.1
RCCD1-202ENST00000554302 RIMBP2O15034 1052 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms