RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 GRAPQ13588 217 aa36.01■■■■□ 3.36
PCNX1-206ENST00000554292 CCDC152Q4G0S7 254 aa36.01■■■■□ 3.36
PCNX1-206ENST00000554292 GRIPAP1Q4V328 841 aa36.01■■■■□ 3.36
PCNX1-206ENST00000554292 RTKN2Q8IZC4 609 aa36.01■■■■□ 3.36
PCNX1-206ENST00000554292 GRAPLQ8TC17 118 aaPredicted RBP36.01■■■■□ 3.36
PCNX1-206ENST00000554292 TAOK3Q9H2K8 898 aa36.01■■■■□ 3.36
PCNX1-206ENST00000554292 TAF1P21675 1872 aa36.01■■■■□ 3.35
PCNX1-206ENST00000554292 LMNB1P20700 586 aa35.99■■■■□ 3.35
PCNX1-206ENST00000554292 C9orf131Q5VYM1 1079 aa35.99■■■■□ 3.35
PCNX1-206ENST00000554292 TMC4Q7Z404 712 aa35.99■■■■□ 3.35
PCNX1-206ENST00000554292 API5Q9BZZ5 524 aaKnown RBP35.98■■■■□ 3.35
PCNX1-206ENST00000554292 RNF181Q9P0P0 153 aa35.98■■■■□ 3.35
PCNX1-206ENST00000554292 DICER1Q9UPY3 1922 aaKnown RBP35.98■■■■□ 3.35
PCNX1-206ENST00000554292 CTSWP56202 376 aa35.97■■■■□ 3.35
PCNX1-206ENST00000554292 NOB1Q9ULX3 412 aaKnown RBP35.96■■■■□ 3.35
PCNX1-206ENST00000554292 ATP6V0A2Q9Y487 856 aa35.96■■■■□ 3.35
PCNX1-206ENST00000554292 GRM8O00222 908 aa35.95■■■■□ 3.35
PCNX1-206ENST00000554292 PLA2G12BQ9BX93 195 aa35.95■■■■□ 3.35
PCNX1-206ENST00000554292 C9orf78Q9NZ63 289 aaPredicted RBP35.95■■■■□ 3.35
PCNX1-206ENST00000554292 CASP7P55210 303 aa35.94■■■■□ 3.34
PCNX1-206ENST00000554292 FKBP4Q02790 459 aaKnown RBP eCLIP35.94■■■■□ 3.34
PCNX1-206ENST00000554292 LRRC37AA6NMS7 1700 aa35.92■■■■□ 3.34
PCNX1-206ENST00000554292 TIAM2Q8IVF5 1701 aa35.92■■■■□ 3.34
PCNX1-206ENST00000554292 ZC3H4Q9UPT8 1303 aaKnown RBP35.92■■■■□ 3.34
PCNX1-206ENST00000554292 IPO8O15397 1037 aaKnown RBP35.92■■■■□ 3.34
PCNX1-206ENST00000554292 OLFM4Q6UX06 510 aa35.92■■■■□ 3.34
PCNX1-206ENST00000554292 ARHGAP45Q92619 1136 aa35.92■■■■□ 3.34
PCNX1-206ENST00000554292 SP8Q8IXZ3 490 aa35.91■■■■□ 3.34
PCNX1-206ENST00000554292 SNED1Q8TER0 1413 aa35.91■■■■□ 3.34
PCNX1-206ENST00000554292 RTL9Q8NET4 1388 aa35.9■■■■□ 3.34
PCNX1-206ENST00000554292 TTLL11Q8NHH1 800 aa35.9■■■■□ 3.34
PCNX1-206ENST00000554292 PSMD1Q99460 953 aa35.9■■■■□ 3.34
PCNX1-206ENST00000554292 CCT4P50991 539 aaKnown RBP35.89■■■■□ 3.34
PCNX1-206ENST00000554292 RPS8P62241 208 aaKnown RBP35.89■■■■□ 3.34
PCNX1-206ENST00000554292 ZNF784Q8NCA9 323 aaPredicted RBP35.89■■■■□ 3.34
PCNX1-206ENST00000554292 CELF1Q92879 486 aaKnown RBP35.89■■■■□ 3.34
PCNX1-206ENST00000554292 CDC5LQ99459 802 aaKnown RBP35.89■■■■□ 3.34
PCNX1-206ENST00000554292 CCDC85AQ96PX6 553 aaPredicted RBP35.88■■■■□ 3.33
PCNX1-206ENST00000554292 SEC31BQ9NQW1 1179 aa35.86■■■■□ 3.33
PCNX1-206ENST00000554292 BCAR3O75815 825 aa35.85■■■■□ 3.33
PCNX1-206ENST00000554292 PRELPP51888 382 aa35.85■■■■□ 3.33
PCNX1-206ENST00000554292 ANKRD18AQ8IVF6 992 aa35.85■■■■□ 3.33
PCNX1-206ENST00000554292 UTYO14607 1347 aa35.84■■■■□ 3.33
PCNX1-206ENST00000554292 SUPT20HQ8NEM7 779 aa35.84■■■■□ 3.33
PCNX1-206ENST00000554292 GREM2Q9H772 168 aa35.84■■■■□ 3.33
PCNX1-206ENST00000554292 SPEF2Q9C093 1822 aa35.83■■■■□ 3.33
PCNX1-206ENST00000554292 CSF1RP07333 972 aa35.83■■■■□ 3.33
PCNX1-206ENST00000554292 DPP8Q6V1X1 898 aaPredicted RBP35.83■■■■□ 3.33
PCNX1-206ENST00000554292 MPNDQ8N594 471 aa35.83■■■■□ 3.33
PCNX1-206ENST00000554292 FRAT1Q92837 279 aaPredicted RBP35.83■■■■□ 3.33
PCNX1-206ENST00000554292 ZNF277Q9NRM2 450 aaPredicted RBP35.83■■■■□ 3.33
PCNX1-206ENST00000554292 COL4A1P02462 1669 aa35.82■■■■□ 3.33
PCNX1-206ENST00000554292 IARSP41252 1262 aaKnown RBP35.81■■■■□ 3.32
PCNX1-206ENST00000554292 ATF7IPQ6VMQ6 1270 aa35.81■■■■□ 3.32
PCNX1-206ENST00000554292 NBPF7P0C2Y1 421 aaPredicted RBP35.79■■■■□ 3.32
PCNX1-206ENST00000554292 FOXO4P98177 505 aa35.79■■■■□ 3.32
PCNX1-206ENST00000554292 FAM161AQ3B820 660 aa35.79■■■■□ 3.32
PCNX1-206ENST00000554292 ZKSCAN2Q63HK3 967 aa35.79■■■■□ 3.32
PCNX1-206ENST00000554292 ITGA6P23229 1130 aa35.78■■■■□ 3.32
PCNX1-206ENST00000554292 SLC51AQ86UW1 340 aa35.78■■■■□ 3.32
PCNX1-206ENST00000554292 RTFDC1Q9BY42 306 aaPredicted RBP35.78■■■■□ 3.32
PCNX1-206ENST00000554292 VPS33BQ9H267 617 aa35.78■■■■□ 3.32
PCNX1-206ENST00000554292 GPBP1L1Q9HC44 474 aaPredicted RBP35.78■■■■□ 3.32
PCNX1-206ENST00000554292 IGHMBP2P38935 993 aaKnown RBP35.77■■■■□ 3.32
PCNX1-206ENST00000554292 CHMP3Q9Y3E7 222 aa35.77■■■■□ 3.32
PCNX1-206ENST00000554292 ANKRD18BA2A2Z9 1011 aa35.76■■■■□ 3.32
PCNX1-206ENST00000554292 TRIM27P14373 513 aa35.76■■■■□ 3.32
PCNX1-206ENST00000554292 LMBR1LQ6UX01 489 aa35.76■■■■□ 3.32
PCNX1-206ENST00000554292 SUCLG2Q96I99 432 aa35.76■■■■□ 3.32
PCNX1-206ENST00000554292 USP44Q9H0E7 712 aa35.76■■■■□ 3.32
PCNX1-206ENST00000554292 KDM2BQ8NHM5 1336 aa35.76■■■■□ 3.31
PCNX1-206ENST00000554292 IFIT5Q13325 482 aaKnown RBP35.75■■■■□ 3.31
PCNX1-206ENST00000554292 ZNF526Q8TF50 670 aaPredicted RBP35.75■■■■□ 3.31
PCNX1-206ENST00000554292 JDP2Q8WYK2 163 aa35.75■■■■□ 3.31
PCNX1-206ENST00000554292 NSFL1CQ9UNZ2 370 aaKnown RBP35.75■■■■□ 3.31
PCNX1-206ENST00000554292 HDAC5Q9UQL6 1122 aa35.75■■■■□ 3.31
PCNX1-206ENST00000554292 LTBP1Q14766 1721 aa35.74■■■■□ 3.31
PCNX1-206ENST00000554292 INTS3Q68E01 1043 aaKnown RBP35.74■■■■□ 3.31
PCNX1-206ENST00000554292 BSDC1Q9NW68 430 aaPredicted RBP35.74■■■■□ 3.31
PCNX1-206ENST00000554292 DUOX1Q9NRD9 1551 aa35.73■■■■□ 3.31
PCNX1-206ENST00000554292 EPHA10Q5JZY3 1008 aa35.73■■■■□ 3.31
PCNX1-206ENST00000554292 LARGE2Q8N3Y3 721 aa35.73■■■■□ 3.31
PCNX1-206ENST00000554292 PPIP5K2O43314 1243 aa35.72■■■■□ 3.31
PCNX1-206ENST00000554292 CCDC57Q2TAC2 916 aa35.72■■■■□ 3.31
PCNX1-206ENST00000554292 DPY19L2Q6NUT2 758 aa35.72■■■■□ 3.31
PCNX1-206ENST00000554292 MPHOSPH8Q99549 860 aa35.72■■■■□ 3.31
PCNX1-206ENST00000554292 UBTFL1P0CB47 393 aaPredicted RBP35.71■■■■□ 3.31
PCNX1-206ENST00000554292 GPSM2P81274 684 aa35.71■■■■□ 3.31
PCNX1-206ENST00000554292 PODXL2Q9NZ53 605 aa35.71■■■■□ 3.31
PCNX1-206ENST00000554292 ANKIB1Q9P2G1 1089 aa35.71■■■■□ 3.31
PCNX1-206ENST00000554292 XDHP47989 1333 aa35.69■■■■□ 3.3
PCNX1-206ENST00000554292 GLTPD2A6NH11 291 aa35.69■■■■□ 3.3
PCNX1-206ENST00000554292 TAF7LQ5H9L4 462 aa35.69■■■■□ 3.3
PCNX1-206ENST00000554292 KAZALD1Q96I82 304 aa35.69■■■■□ 3.3
PCNX1-206ENST00000554292 YTHDC1Q96MU7 727 aaKnown RBP35.69■■■■□ 3.3
PCNX1-206ENST00000554292 EYA3Q99504 573 aa35.69■■■■□ 3.3
PCNX1-206ENST00000554292 BICC1Q9H694 974 aaKnown RBP35.69■■■■□ 3.3
PCNX1-206ENST00000554292 C6orf229H3BNL8 230 aa35.68■■■■□ 3.3
PCNX1-206ENST00000554292 RABL6Q3YEC7 729 aaPredicted RBP35.68■■■■□ 3.3
PCNX1-206ENST00000554292 FTSJ3Q8IY81 847 aaKnown RBP35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms