RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 EAPPQ56P03 285 aaPredicted RBP19.54■□□□□ 0.72
SDR39U1-205ENST00000553546 DPP8Q6V1X1 898 aaPredicted RBP19.54■□□□□ 0.72
SDR39U1-205ENST00000553546 RTFDC1Q9BY42 306 aaPredicted RBP19.54■□□□□ 0.72
SDR39U1-205ENST00000553546 ADAMTSL1Q8N6G6 1762 aa19.53■□□□□ 0.72
SDR39U1-205ENST00000553546 ELL2O00472 640 aaPredicted RBP19.53■□□□□ 0.72
SDR39U1-205ENST00000553546 LMOD1P29536 600 aaPredicted RBP19.53■□□□□ 0.72
SDR39U1-205ENST00000553546 CCDC30Q5VVM6 783 aa19.53■□□□□ 0.72
SDR39U1-205ENST00000553546 MPNDQ8N594 471 aa19.53■□□□□ 0.72
SDR39U1-205ENST00000553546 GJA3Q9Y6H8 435 aa19.53■□□□□ 0.72
SDR39U1-205ENST00000553546 PASKQ96RG2 1323 aa19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 LRRC37AA6NMS7 1700 aa19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 ANP32CO43423 234 aa19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 DDX58O95786 925 aaKnown RBP19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 SF3B3Q15393 1217 aaKnown RBP19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 AOC3Q16853 763 aa19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 FAM161AQ3B820 660 aa19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 CCDC184Q52MB2 194 aa19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 C8orf58Q8NAV2 365 aa19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 FAM89AQ96GI7 184 aa19.52■□□□□ 0.72
SDR39U1-205ENST00000553546 CTCFP49711 727 aaPredicted RBP19.51■□□□□ 0.71
SDR39U1-205ENST00000553546 SLC51AQ86UW1 340 aa19.51■□□□□ 0.71
SDR39U1-205ENST00000553546 PHAXQ9H814 394 aaKnown RBP19.51■□□□□ 0.71
SDR39U1-205ENST00000553546 CLEC11AQ9Y240 323 aa19.51■□□□□ 0.71
SDR39U1-205ENST00000553546 MRS2Q9HD23 443 aa19.5■□□□□ 0.71
SDR39U1-205ENST00000553546 ZNRF3Q9ULT6 936 aa19.5■□□□□ 0.71
SDR39U1-205ENST00000553546 IRS4O14654 1257 aaPredicted RBP19.49■□□□□ 0.71
SDR39U1-205ENST00000553546 VEGFBP49765 207 aa19.49■□□□□ 0.71
SDR39U1-205ENST00000553546 KIAA2012Q0VF49 1180 aa19.49■□□□□ 0.71
SDR39U1-205ENST00000553546 WWC1Q8IX03 1113 aa19.49■□□□□ 0.71
SDR39U1-205ENST00000553546 ZBTB38Q8NAP3 1195 aaPredicted RBP19.49■□□□□ 0.71
SDR39U1-205ENST00000553546 CCDC191Q8NCU4 936 aa19.49■□□□□ 0.71
SDR39U1-205ENST00000553546 ZNF428Q96B54 188 aa19.49■□□□□ 0.71
SDR39U1-205ENST00000553546 TAF1P21675 1872 aa19.49■□□□□ 0.71
SDR39U1-205ENST00000553546 IL16Q14005 1332 aa19.49■□□□□ 0.71
SDR39U1-205ENST00000553546 SCNN1DP51172 638 aa19.48■□□□□ 0.71
SDR39U1-205ENST00000553546 LBX1P52954 281 aa19.48■□□□□ 0.71
SDR39U1-205ENST00000553546 AIDAQ96BJ3 306 aa19.48■□□□□ 0.71
SDR39U1-205ENST00000553546 MYD88Q99836 296 aa19.48■□□□□ 0.71
SDR39U1-205ENST00000553546 STK31Q9BXU1 1019 aa19.48■□□□□ 0.71
SDR39U1-205ENST00000553546 ITGBL1O95965 494 aaPredicted RBP19.47■□□□□ 0.71
SDR39U1-205ENST00000553546 RTL5Q5HYW3 569 aaPredicted RBP19.47■□□□□ 0.71
SDR39U1-205ENST00000553546 TSR2Q969E8 191 aaKnown RBP19.47■□□□□ 0.71
SDR39U1-205ENST00000553546 METTL22Q9BUU2 404 aaPredicted RBP19.47■□□□□ 0.71
SDR39U1-205ENST00000553546 WBP1LQ9NX94 342 aa19.47■□□□□ 0.71
SDR39U1-205ENST00000553546 LTBP1Q14766 1721 aa19.47■□□□□ 0.71
SDR39U1-205ENST00000553546 DUOX1Q9NRD9 1551 aa19.46■□□□□ 0.71
SDR39U1-205ENST00000553546 PCCAP05165 728 aaPredicted RBP19.46■□□□□ 0.71
SDR39U1-205ENST00000553546 USP50Q70EL3 339 aaPredicted RBP19.46■□□□□ 0.71
SDR39U1-205ENST00000553546 CNTROBQ8N137 903 aa19.46■□□□□ 0.71
SDR39U1-205ENST00000553546 TSPYL6Q8N831 410 aa19.46■□□□□ 0.71
SDR39U1-205ENST00000553546 ABHD8Q96I13 439 aa19.46■□□□□ 0.71
SDR39U1-205ENST00000553546 CWC25Q9NXE8 425 aaPredicted RBP19.46■□□□□ 0.71
SDR39U1-205ENST00000553546 THSD7BQ9C0I4 1608 aa19.46■□□□□ 0.71
SDR39U1-205ENST00000553546 CDHR2Q9BYE9 1310 aa19.46■□□□□ 0.71
SDR39U1-205ENST00000553546 TMEM88BA6NKF7 163 aa19.45■□□□□ 0.7
SDR39U1-205ENST00000553546 HSPA8P11142 646 aaKnown RBP19.45■□□□□ 0.7
SDR39U1-205ENST00000553546 CXCL9Q07325 125 aa19.45■□□□□ 0.7
SDR39U1-205ENST00000553546 CIAPIN1Q6FI81 312 aa19.45■□□□□ 0.7
SDR39U1-205ENST00000553546 CELF1Q92879 486 aaKnown RBP19.45■□□□□ 0.7
SDR39U1-205ENST00000553546 EPS15P42566 896 aa19.44■□□□□ 0.7
SDR39U1-205ENST00000553546 TNIP1Q15025 636 aa19.44■□□□□ 0.7
SDR39U1-205ENST00000553546 TWISTNBQ3B726 338 aaPredicted RBP19.44■□□□□ 0.7
SDR39U1-205ENST00000553546 MAP1SQ66K74 1059 aaPredicted RBP19.44■□□□□ 0.7
SDR39U1-205ENST00000553546 GPRC5DQ9NZD1 345 aa19.44■□□□□ 0.7
SDR39U1-205ENST00000553546 MAP3K2Q9Y2U5 619 aa19.44■□□□□ 0.7
SDR39U1-205ENST00000553546 PDE8AO60658 829 aa19.43■□□□□ 0.7
SDR39U1-205ENST00000553546 RPS8P62241 208 aaKnown RBP19.43■□□□□ 0.7
SDR39U1-205ENST00000553546 NEXNQ0ZGT2 675 aa19.43■□□□□ 0.7
SDR39U1-205ENST00000553546 CCDC152Q4G0S7 254 aa19.43■□□□□ 0.7
SDR39U1-205ENST00000553546 KSR2Q6VAB6 950 aa19.43■□□□□ 0.7
SDR39U1-205ENST00000553546 ADARB2Q9NS39 739 aaKnown RBP19.43■□□□□ 0.7
SDR39U1-205ENST00000553546 NSFL1CQ9UNZ2 370 aaKnown RBP19.43■□□□□ 0.7
SDR39U1-205ENST00000553546 WASHC4Q2M389 1173 aa19.42■□□□□ 0.7
SDR39U1-205ENST00000553546 EYA3Q99504 573 aa19.42■□□□□ 0.7
SDR39U1-205ENST00000553546 PI4KAP2A4QPH2 592 aa19.41■□□□□ 0.7
SDR39U1-205ENST00000553546 GMPSP49915 693 aaPredicted RBP19.41■□□□□ 0.7
SDR39U1-205ENST00000553546 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
SDR39U1-205ENST00000553546 PI4KAP1Q8N8J0 262 aa19.41■□□□□ 0.7
SDR39U1-205ENST00000553546 BCL2L13Q9BXK5 485 aa19.41■□□□□ 0.7
SDR39U1-205ENST00000553546 CACNA1FO60840 1977 aa19.41■□□□□ 0.7
SDR39U1-205ENST00000553546 C6orf229H3BNL8 230 aa19.4■□□□□ 0.7
SDR39U1-205ENST00000553546 RAD17O75943 681 aa19.4■□□□□ 0.7
SDR39U1-205ENST00000553546 RASSF10A6NK89 507 aa19.39■□□□□ 0.69
SDR39U1-205ENST00000553546 GPSM2P81274 684 aa19.39■□□□□ 0.69
SDR39U1-205ENST00000553546 PODXL2Q9NZ53 605 aa19.39■□□□□ 0.69
SDR39U1-205ENST00000553546 FANCIQ9NVI1 1328 aa19.39■□□□□ 0.69
SDR39U1-205ENST00000553546 COL4A1P02462 1669 aa19.39■□□□□ 0.69
SDR39U1-205ENST00000553546 YDJCA8MPS7 323 aa19.38■□□□□ 0.69
SDR39U1-205ENST00000553546 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
SDR39U1-205ENST00000553546 MYH3P11055 1940 aa19.38■□□□□ 0.69
SDR39U1-205ENST00000553546 SEC31BQ9NQW1 1179 aa19.38■□□□□ 0.69
SDR39U1-205ENST00000553546 POLLQ9UGP5 575 aa19.38■□□□□ 0.69
SDR39U1-205ENST00000553546 IGKV5-2P06315 115 aa19.37■□□□□ 0.69
SDR39U1-205ENST00000553546 ANKRD18AQ8IVF6 992 aa19.37■□□□□ 0.69
SDR39U1-205ENST00000553546 TBC1D16Q8TBP0 767 aa19.37■□□□□ 0.69
SDR39U1-205ENST00000553546 CDC5LQ99459 802 aaKnown RBP19.37■□□□□ 0.69
SDR39U1-205ENST00000553546 TRPM7Q96QT4 1865 aa19.37■□□□□ 0.69
SDR39U1-205ENST00000553546 CTSWP56202 376 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms