RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
SIX1-202ENST00000553535 MKRN1Q9UHC7 482 aaKnown RBP16.17■□□□□ 0.18
SIX1-202ENST00000553535 SH3TC1Q8TE82 1336 aa16.17■□□□□ 0.18
SIX1-202ENST00000553535 TAF1P21675 1872 aa16.17■□□□□ 0.18
SIX1-202ENST00000553535 HSPA1AP0DMV8 641 aaKnown RBP16.17■□□□□ 0.18
SIX1-202ENST00000553535 HSPA1BP0DMV9 641 aaKnown RBP16.17■□□□□ 0.18
SIX1-202ENST00000553535 ISCA1Q9BUE6 129 aa16.17■□□□□ 0.18
SIX1-202ENST00000553535 LTBP1Q14766 1721 aa16.16■□□□□ 0.18
SIX1-202ENST00000553535 APAF1O14727 1248 aa16.16■□□□□ 0.18
SIX1-202ENST00000553535 PPIP5K2O43314 1243 aa16.16■□□□□ 0.18
SIX1-202ENST00000553535 SCNN1DP51172 638 aa16.16■□□□□ 0.18
SIX1-202ENST00000553535 NIM1KQ8IY84 436 aa16.16■□□□□ 0.18
SIX1-202ENST00000553535 CNTROBQ8N137 903 aa16.16■□□□□ 0.18
SIX1-202ENST00000553535 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
SIX1-202ENST00000553535 TMEM88BA6NKF7 163 aa16.15■□□□□ 0.18
SIX1-202ENST00000553535 EPS15P42566 896 aa16.15■□□□□ 0.18
SIX1-202ENST00000553535 AOC3Q16853 763 aa16.15■□□□□ 0.18
SIX1-202ENST00000553535 MAP1SQ66K74 1059 aaPredicted RBP16.15■□□□□ 0.18
SIX1-202ENST00000553535 DDX46Q7L014 1031 aaKnown RBP16.15■□□□□ 0.18
SIX1-202ENST00000553535 SUPT20HQ8NEM7 779 aa16.15■□□□□ 0.18
SIX1-202ENST00000553535 CNTNAP1P78357 1384 aa16.15■□□□□ 0.18
SIX1-202ENST00000553535 GRAPQ13588 217 aa16.14■□□□□ 0.17
SIX1-202ENST00000553535 MPNDQ8N594 471 aa16.14■□□□□ 0.17
SIX1-202ENST00000553535 GRAPLQ8TC17 118 aaPredicted RBP16.14■□□□□ 0.17
SIX1-202ENST00000553535 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
SIX1-202ENST00000553535 ATP5J2-PTCD1G3V325 749 aa16.13■□□□□ 0.17
SIX1-202ENST00000553535 LMOD1P29536 600 aaPredicted RBP16.13■□□□□ 0.17
SIX1-202ENST00000553535 TRIM28Q13263 835 aaKnown RBP16.13■□□□□ 0.17
SIX1-202ENST00000553535 DPP8Q6V1X1 898 aaPredicted RBP16.13■□□□□ 0.17
SIX1-202ENST00000553535 IFT57Q9NWB7 429 aa16.13■□□□□ 0.17
SIX1-202ENST00000553535 ZNRF3Q9ULT6 936 aa16.13■□□□□ 0.17
SIX1-202ENST00000553535 DDX60Q8IY21 1712 aaKnown RBP16.13■□□□□ 0.17
SIX1-202ENST00000553535 GNAI1P63096 354 aa16.13■□□□□ 0.17
SIX1-202ENST00000553535 CXCL9Q07325 125 aa16.13■□□□□ 0.17
SIX1-202ENST00000553535 SF3B3Q15393 1217 aaKnown RBP16.13■□□□□ 0.17
SIX1-202ENST00000553535 FAM89AQ96GI7 184 aa16.13■□□□□ 0.17
SIX1-202ENST00000553535 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
SIX1-202ENST00000553535 USP50Q70EL3 339 aaPredicted RBP16.12■□□□□ 0.17
SIX1-202ENST00000553535 TMC4Q7Z404 712 aa16.12■□□□□ 0.17
SIX1-202ENST00000553535 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
SIX1-202ENST00000553535 VEGFBP49765 207 aa16.11■□□□□ 0.17
SIX1-202ENST00000553535 CALD1Q05682 793 aaKnown RBP16.11■□□□□ 0.17
SIX1-202ENST00000553535 GPRC5DQ9NZD1 345 aa16.11■□□□□ 0.17
SIX1-202ENST00000553535 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
SIX1-202ENST00000553535 PHAXQ9H814 394 aaKnown RBP16.1■□□□□ 0.17
SIX1-202ENST00000553535 C8orf58Q8NAV2 365 aa16.09■□□□□ 0.17
SIX1-202ENST00000553535 CELF1Q92879 486 aaKnown RBP16.09■□□□□ 0.17
SIX1-202ENST00000553535 LRRC37AA6NMS7 1700 aa16.09■□□□□ 0.17
SIX1-202ENST00000553535 RASSF10A6NK89 507 aa16.09■□□□□ 0.17
SIX1-202ENST00000553535 IRS4O14654 1257 aaPredicted RBP16.09■□□□□ 0.17
SIX1-202ENST00000553535 RTL5Q5HYW3 569 aaPredicted RBP16.09■□□□□ 0.17
SIX1-202ENST00000553535 CIAPIN1Q6FI81 312 aa16.09■□□□□ 0.17
SIX1-202ENST00000553535 RIC3Q7Z5B4 369 aa16.09■□□□□ 0.17
SIX1-202ENST00000553535 TNS4Q8IZW8 715 aa16.09■□□□□ 0.17
SIX1-202ENST00000553535 ADARB2Q9NS39 739 aaKnown RBP16.09■□□□□ 0.17
SIX1-202ENST00000553535 GMPSP49915 693 aaPredicted RBP16.08■□□□□ 0.16
SIX1-202ENST00000553535 FMR1Q06787 632 aaKnown RBP eCLIP16.08■□□□□ 0.16
SIX1-202ENST00000553535 DEFB115Q30KQ5 88 aa16.08■□□□□ 0.16
SIX1-202ENST00000553535 CCDC184Q52MB2 194 aa16.08■□□□□ 0.16
SIX1-202ENST00000553535 DUOX1Q9NRD9 1551 aa16.08■□□□□ 0.16
SIX1-202ENST00000553535 YDJCA8MPS7 323 aa16.07■□□□□ 0.16
SIX1-202ENST00000553535 RAD17O75943 681 aa16.07■□□□□ 0.16
SIX1-202ENST00000553535 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
SIX1-202ENST00000553535 TNIP1Q15025 636 aa16.07■□□□□ 0.16
SIX1-202ENST00000553535 ZBTB38Q8NAP3 1195 aaPredicted RBP16.07■□□□□ 0.16
SIX1-202ENST00000553535 TRPM7Q96QT4 1865 aa16.07■□□□□ 0.16
SIX1-202ENST00000553535 COL4A1P02462 1669 aa16.06■□□□□ 0.16
SIX1-202ENST00000553535 FOXN1O15353 648 aa16.06■□□□□ 0.16
SIX1-202ENST00000553535 PGAP2Q9UHJ9 254 aa16.06■□□□□ 0.16
SIX1-202ENST00000553535 NSFL1CQ9UNZ2 370 aaKnown RBP16.06■□□□□ 0.16
SIX1-202ENST00000553535 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
SIX1-202ENST00000553535 CST9Q5W186 159 aa16.05■□□□□ 0.16
SIX1-202ENST00000553535 CCDC191Q8NCU4 936 aa16.05■□□□□ 0.16
SIX1-202ENST00000553535 MYD88Q99836 296 aa16.05■□□□□ 0.16
SIX1-202ENST00000553535 POLLQ9UGP5 575 aa16.05■□□□□ 0.16
SIX1-202ENST00000553535 CDHR2Q9BYE9 1310 aa16.05■□□□□ 0.16
SIX1-202ENST00000553535 TRAF5O00463 557 aa16.04■□□□□ 0.16
SIX1-202ENST00000553535 GPSM2P81274 684 aa16.04■□□□□ 0.16
SIX1-202ENST00000553535 WASHC4Q2M389 1173 aa16.04■□□□□ 0.16
SIX1-202ENST00000553535 CCDC30Q5VVM6 783 aa16.04■□□□□ 0.16
SIX1-202ENST00000553535 TSPYL6Q8N831 410 aa16.04■□□□□ 0.16
SIX1-202ENST00000553535 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
SIX1-202ENST00000553535 WBP1LQ9NX94 342 aa16.04■□□□□ 0.16
SIX1-202ENST00000553535 PCCAP05165 728 aaPredicted RBP16.04■□□□□ 0.16
SIX1-202ENST00000553535 HIRAP54198 1017 aaPredicted RBP16.04■□□□□ 0.16
SIX1-202ENST00000553535 METTL22Q9BUU2 404 aaPredicted RBP16.04■□□□□ 0.16
SIX1-202ENST00000553535 BCL2L13Q9BXK5 485 aa16.04■□□□□ 0.16
SIX1-202ENST00000553535 ABT1Q9ULW3 272 aaKnown RBP16.04■□□□□ 0.16
SIX1-202ENST00000553535 WDR33Q9C0J8 1336 aaKnown RBP16.03■□□□□ 0.16
SIX1-202ENST00000553535 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
SIX1-202ENST00000553535 CCDC27Q2M243 656 aa16.03■□□□□ 0.16
SIX1-202ENST00000553535 ZC3H15Q8WU90 426 aaKnown RBP16.03■□□□□ 0.16
SIX1-202ENST00000553535 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
SIX1-202ENST00000553535 CNOT7Q9UIV1 285 aaKnown RBP16.03■□□□□ 0.16
SIX1-202ENST00000553535 C6orf229H3BNL8 230 aa16.02■□□□□ 0.16
SIX1-202ENST00000553535 RIMBP2O15034 1052 aa16.02■□□□□ 0.16
SIX1-202ENST00000553535 DDX58O95786 925 aaKnown RBP16.02■□□□□ 0.16
SIX1-202ENST00000553535 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
SIX1-202ENST00000553535 DPF2Q92785 391 aa16.02■□□□□ 0.16
SIX1-202ENST00000553535 DBNDD1Q9H9R9 158 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms