RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 ALDH1L1O75891 902 aa23.44■■□□□ 1.34
CPSF2-202ENST00000553427 PRELPP51888 382 aa23.44■■□□□ 1.34
CPSF2-202ENST00000553427 RARSP54136 660 aaKnown RBP23.44■■□□□ 1.34
CPSF2-202ENST00000553427 CASP7P55210 303 aa23.44■■□□□ 1.34
CPSF2-202ENST00000553427 PLA2G12BQ9BX93 195 aa23.44■■□□□ 1.34
CPSF2-202ENST00000553427 BCL2L13Q9BXK5 485 aa23.44■■□□□ 1.34
CPSF2-202ENST00000553427 RNF181Q9P0P0 153 aa23.44■■□□□ 1.34
CPSF2-202ENST00000553427 FKBP4Q02790 459 aaKnown RBP eCLIP23.43■■□□□ 1.34
CPSF2-202ENST00000553427 CCDC152Q4G0S7 254 aa23.43■■□□□ 1.34
CPSF2-202ENST00000553427 UBE3BQ7Z3V4 1068 aa23.43■■□□□ 1.34
CPSF2-202ENST00000553427 ATP6V0A2Q9Y487 856 aa23.43■■□□□ 1.34
CPSF2-202ENST00000553427 RTL9Q8NET4 1388 aa23.42■■□□□ 1.34
CPSF2-202ENST00000553427 CTSWP56202 376 aa23.42■■□□□ 1.34
CPSF2-202ENST00000553427 PSMD1Q99460 953 aa23.42■■□□□ 1.34
CPSF2-202ENST00000553427 OLFM4Q6UX06 510 aa23.41■■□□□ 1.34
CPSF2-202ENST00000553427 JARID2Q92833 1246 aaPredicted RBP23.41■■□□□ 1.34
CPSF2-202ENST00000553427 SRCIN1Q9C0H9 1055 aa23.41■■□□□ 1.34
CPSF2-202ENST00000553427 LRRC37AA6NMS7 1700 aa23.41■■□□□ 1.34
CPSF2-202ENST00000553427 KIF16BQ96L93 1317 aa23.4■■□□□ 1.34
CPSF2-202ENST00000553427 SP8Q8IXZ3 490 aa23.4■■□□□ 1.34
CPSF2-202ENST00000553427 SLC4A10Q6U841 1118 aa23.39■■□□□ 1.33
CPSF2-202ENST00000553427 TMX4Q9H1E5 349 aaPredicted RBP23.39■■□□□ 1.33
CPSF2-202ENST00000553427 MYH3P11055 1940 aa23.39■■□□□ 1.33
CPSF2-202ENST00000553427 GRM8O00222 908 aa23.38■■□□□ 1.33
CPSF2-202ENST00000553427 TTLL11Q8NHH1 800 aa23.38■■□□□ 1.33
CPSF2-202ENST00000553427 CELF1Q92879 486 aaKnown RBP23.38■■□□□ 1.33
CPSF2-202ENST00000553427 TIAM2Q8IVF5 1701 aa23.38■■□□□ 1.33
CPSF2-202ENST00000553427 DICER1Q9UPY3 1922 aaKnown RBP23.37■■□□□ 1.33
CPSF2-202ENST00000553427 ARHGAP45Q92619 1136 aa23.37■■□□□ 1.33
CPSF2-202ENST00000553427 UTYO14607 1347 aa23.36■■□□□ 1.33
CPSF2-202ENST00000553427 COL4A1P02462 1669 aa23.36■■□□□ 1.33
CPSF2-202ENST00000553427 RPS8P62241 208 aaKnown RBP23.36■■□□□ 1.33
CPSF2-202ENST00000553427 RTFDC1Q9BY42 306 aaPredicted RBP23.36■■□□□ 1.33
CPSF2-202ENST00000553427 API5Q9BZZ5 524 aaKnown RBP23.36■■□□□ 1.33
CPSF2-202ENST00000553427 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
CPSF2-202ENST00000553427 CSF1RP07333 972 aa23.35■■□□□ 1.33
CPSF2-202ENST00000553427 SEC31BQ9NQW1 1179 aa23.35■■□□□ 1.33
CPSF2-202ENST00000553427 TAF1P21675 1872 aa23.34■■□□□ 1.33
CPSF2-202ENST00000553427 SLC51AQ86UW1 340 aa23.34■■□□□ 1.33
CPSF2-202ENST00000553427 CDC5LQ99459 802 aaKnown RBP23.34■■□□□ 1.33
CPSF2-202ENST00000553427 VPS33BQ9H267 617 aa23.34■■□□□ 1.33
CPSF2-202ENST00000553427 ZNF277Q9NRM2 450 aaPredicted RBP23.34■■□□□ 1.33
CPSF2-202ENST00000553427 C9orf78Q9NZ63 289 aaPredicted RBP23.34■■□□□ 1.33
CPSF2-202ENST00000553427 CCDC88AQ3V6T2 1871 aa23.34■■□□□ 1.33
CPSF2-202ENST00000553427 IARSP41252 1262 aaKnown RBP23.33■■□□□ 1.33
CPSF2-202ENST00000553427 SUPT20HQ8NEM7 779 aa23.33■■□□□ 1.33
CPSF2-202ENST00000553427 GREM2Q9H772 168 aa23.33■■□□□ 1.33
CPSF2-202ENST00000553427 CCT4P50991 539 aaKnown RBP23.32■■□□□ 1.32
CPSF2-202ENST00000553427 DPP8Q6V1X1 898 aaPredicted RBP23.32■■□□□ 1.32
CPSF2-202ENST00000553427 MPNDQ8N594 471 aa23.32■■□□□ 1.32
CPSF2-202ENST00000553427 GPBP1L1Q9HC44 474 aaPredicted RBP23.32■■□□□ 1.32
CPSF2-202ENST00000553427 DUOX1Q9NRD9 1551 aa23.31■■□□□ 1.32
CPSF2-202ENST00000553427 LTBP1Q14766 1721 aa23.31■■□□□ 1.32
CPSF2-202ENST00000553427 IPO8O15397 1037 aaKnown RBP23.31■■□□□ 1.32
CPSF2-202ENST00000553427 FOXO4P98177 505 aa23.31■■□□□ 1.32
CPSF2-202ENST00000553427 ANKRD18AQ8IVF6 992 aa23.31■■□□□ 1.32
CPSF2-202ENST00000553427 CCDC85AQ96PX6 553 aaPredicted RBP23.31■■□□□ 1.32
CPSF2-202ENST00000553427 KDM2BQ8NHM5 1336 aa23.31■■□□□ 1.32
CPSF2-202ENST00000553427 FAM161AQ3B820 660 aa23.3■■□□□ 1.32
CPSF2-202ENST00000553427 GLTPD2A6NH11 291 aa23.29■■□□□ 1.32
CPSF2-202ENST00000553427 BCAR3O75815 825 aa23.29■■□□□ 1.32
CPSF2-202ENST00000553427 PODXL2Q9NZ53 605 aa23.29■■□□□ 1.32
CPSF2-202ENST00000553427 NBPF7P0C2Y1 421 aaPredicted RBP23.28■■□□□ 1.32
CPSF2-202ENST00000553427 ITGA6P23229 1130 aa23.28■■□□□ 1.32
CPSF2-202ENST00000553427 BSDC1Q9NW68 430 aaPredicted RBP23.28■■□□□ 1.32
CPSF2-202ENST00000553427 EPHA10Q5JZY3 1008 aa23.27■■□□□ 1.32
CPSF2-202ENST00000553427 ZNF526Q8TF50 670 aaPredicted RBP23.27■■□□□ 1.32
CPSF2-202ENST00000553427 USP44Q9H0E7 712 aa23.27■■□□□ 1.32
CPSF2-202ENST00000553427 COL4A5P29400 1685 aa23.27■■□□□ 1.32
CPSF2-202ENST00000553427 FZD9O00144 591 aa23.26■■□□□ 1.31
CPSF2-202ENST00000553427 ATF7IPQ6VMQ6 1270 aa23.26■■□□□ 1.31
CPSF2-202ENST00000553427 JDP2Q8WYK2 163 aa23.26■■□□□ 1.31
CPSF2-202ENST00000553427 KAZALD1Q96I82 304 aa23.26■■□□□ 1.31
CPSF2-202ENST00000553427 SUCLG2Q96I99 432 aa23.26■■□□□ 1.31
CPSF2-202ENST00000553427 PPIP5K2O43314 1243 aa23.25■■□□□ 1.31
CPSF2-202ENST00000553427 TRIM27P14373 513 aa23.25■■□□□ 1.31
CPSF2-202ENST00000553427 IGHMBP2P38935 993 aaKnown RBP23.25■■□□□ 1.31
CPSF2-202ENST00000553427 GPSM2P81274 684 aa23.25■■□□□ 1.31
CPSF2-202ENST00000553427 KIAA2012Q0VF49 1180 aa23.25■■□□□ 1.31
CPSF2-202ENST00000553427 RABL6Q3YEC7 729 aaPredicted RBP23.25■■□□□ 1.31
CPSF2-202ENST00000553427 INTS3Q68E01 1043 aaKnown RBP23.25■■□□□ 1.31
CPSF2-202ENST00000553427 DPY19L2Q6NUT2 758 aa23.25■■□□□ 1.31
CPSF2-202ENST00000553427 LMBR1LQ6UX01 489 aa23.25■■□□□ 1.31
CPSF2-202ENST00000553427 LARGE2Q8N3Y3 721 aa23.25■■□□□ 1.31
CPSF2-202ENST00000553427 NSFL1CQ9UNZ2 370 aaKnown RBP23.25■■□□□ 1.31
CPSF2-202ENST00000553427 ANKRD18BA2A2Z9 1011 aa23.24■■□□□ 1.31
CPSF2-202ENST00000553427 IFIT5Q13325 482 aaKnown RBP23.24■■□□□ 1.31
CPSF2-202ENST00000553427 XDHP47989 1333 aa23.24■■□□□ 1.31
CPSF2-202ENST00000553427 WDR90Q96KV7 1748 aa23.23■■□□□ 1.31
CPSF2-202ENST00000553427 AOC3Q16853 763 aa23.23■■□□□ 1.31
CPSF2-202ENST00000553427 ZKSCAN2Q63HK3 967 aa23.23■■□□□ 1.31
CPSF2-202ENST00000553427 KIF3CO14782 793 aa23.22■■□□□ 1.31
CPSF2-202ENST00000553427 NIM1KQ8IY84 436 aa23.22■■□□□ 1.31
CPSF2-202ENST00000553427 TBC1D16Q8TBP0 767 aa23.22■■□□□ 1.31
CPSF2-202ENST00000553427 FRAT1Q92837 279 aaPredicted RBP23.22■■□□□ 1.31
CPSF2-202ENST00000553427 EYA3Q99504 573 aa23.22■■□□□ 1.31
CPSF2-202ENST00000553427 POLLQ9UGP5 575 aa23.22■■□□□ 1.31
CPSF2-202ENST00000553427 MINPP1Q9UNW1 487 aa23.22■■□□□ 1.31
CPSF2-202ENST00000553427 CCDC57Q2TAC2 916 aa23.21■■□□□ 1.31
CPSF2-202ENST00000553427 ANKRD44Q8N8A2 993 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms