RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 DDX58O95786 925 aaKnown RBP25.13■■□□□ 1.61
IFT43-204ENST00000553338 LDHDQ86WU2 507 aa25.13■■□□□ 1.61
IFT43-204ENST00000553338 MPNDQ8N594 471 aa25.13■■□□□ 1.61
IFT43-204ENST00000553338 IRS4O14654 1257 aaPredicted RBP25.12■■□□□ 1.61
IFT43-204ENST00000553338 EPHX2P34913 555 aa25.12■■□□□ 1.61
IFT43-204ENST00000553338 SALL2Q9Y467 1007 aaPredicted RBP25.12■■□□□ 1.61
IFT43-204ENST00000553338 IL16Q14005 1332 aa25.12■■□□□ 1.61
IFT43-204ENST00000553338 TAF1P21675 1872 aa25.11■■□□□ 1.61
IFT43-204ENST00000553338 SF3B3Q15393 1217 aaKnown RBP25.11■■□□□ 1.61
IFT43-204ENST00000553338 TWISTNBQ3B726 338 aaPredicted RBP25.11■■□□□ 1.61
IFT43-204ENST00000553338 NCBP3Q53F19 620 aaKnown RBP25.11■■□□□ 1.61
IFT43-204ENST00000553338 TMC4Q7Z404 712 aa25.11■■□□□ 1.61
IFT43-204ENST00000553338 ZBTB38Q8NAP3 1195 aaPredicted RBP25.11■■□□□ 1.61
IFT43-204ENST00000553338 STK31Q9BXU1 1019 aa25.11■■□□□ 1.61
IFT43-204ENST00000553338 RTFDC1Q9BY42 306 aaPredicted RBP25.11■■□□□ 1.61
IFT43-204ENST00000553338 VPS33BQ9H267 617 aa25.11■■□□□ 1.61
IFT43-204ENST00000553338 METTL22Q9BUU2 404 aaPredicted RBP25.1■■□□□ 1.61
IFT43-204ENST00000553338 CLEC11AQ9Y240 323 aa25.1■■□□□ 1.61
IFT43-204ENST00000553338 CCDC191Q8NCU4 936 aa25.09■■□□□ 1.61
IFT43-204ENST00000553338 LMOD1P29536 600 aaPredicted RBP25.08■■□□□ 1.61
IFT43-204ENST00000553338 PNMA8AQ86V59 439 aaPredicted RBP25.08■■□□□ 1.61
IFT43-204ENST00000553338 CELF1Q92879 486 aaKnown RBP25.08■■□□□ 1.61
IFT43-204ENST00000553338 CWC25Q9NXE8 425 aaPredicted RBP25.08■■□□□ 1.61
IFT43-204ENST00000553338 MAP3K2Q9Y2U5 619 aa25.08■■□□□ 1.61
IFT43-204ENST00000553338 HSP90B1P14625 803 aaKnown RBP25.07■■□□□ 1.6
IFT43-204ENST00000553338 LRRC37AA6NMS7 1700 aa25.06■■□□□ 1.6
IFT43-204ENST00000553338 PCCAP05165 728 aaPredicted RBP25.06■■□□□ 1.6
IFT43-204ENST00000553338 KSR2Q6VAB6 950 aa25.06■■□□□ 1.6
IFT43-204ENST00000553338 ZNRF3Q9ULT6 936 aa25.06■■□□□ 1.6
IFT43-204ENST00000553338 FANCIQ9NVI1 1328 aa25.06■■□□□ 1.6
IFT43-204ENST00000553338 PI4KAP2A4QPH2 592 aa25.05■■□□□ 1.6
IFT43-204ENST00000553338 KIAA2012Q0VF49 1180 aa25.05■■□□□ 1.6
IFT43-204ENST00000553338 FAM9BQ8IZU0 186 aa25.05■■□□□ 1.6
IFT43-204ENST00000553338 PI4KAP1Q8N8J0 262 aa25.05■■□□□ 1.6
IFT43-204ENST00000553338 JARID2Q92833 1246 aaPredicted RBP25.05■■□□□ 1.6
IFT43-204ENST00000553338 COL4A1P02462 1669 aa25.04■■□□□ 1.6
IFT43-204ENST00000553338 ADAMTSL1Q8N6G6 1762 aa25.04■■□□□ 1.6
IFT43-204ENST00000553338 SCNN1DP51172 638 aa25.04■■□□□ 1.6
IFT43-204ENST00000553338 WDR63Q8IWG1 891 aa25.04■■□□□ 1.6
IFT43-204ENST00000553338 JMYQ8N9B5 988 aa25.04■■□□□ 1.6
IFT43-204ENST00000553338 DUOX1Q9NRD9 1551 aa25.04■■□□□ 1.6
IFT43-204ENST00000553338 LTBP1Q14766 1721 aa25.03■■□□□ 1.6
IFT43-204ENST00000553338 SLC4A2P04920 1241 aa25.03■■□□□ 1.6
IFT43-204ENST00000553338 CREBZFQ9NS37 354 aa25.03■■□□□ 1.6
IFT43-204ENST00000553338 NSFL1CQ9UNZ2 370 aaKnown RBP25.03■■□□□ 1.6
IFT43-204ENST00000553338 PDE8AO60658 829 aa25.02■■□□□ 1.6
IFT43-204ENST00000553338 EPS15P42566 896 aa25.02■■□□□ 1.6
IFT43-204ENST00000553338 RPS8P62241 208 aaKnown RBP25.02■■□□□ 1.6
IFT43-204ENST00000553338 CXCL9Q07325 125 aa25.02■■□□□ 1.6
IFT43-204ENST00000553338 NEXNQ0ZGT2 675 aa25.02■■□□□ 1.6
IFT43-204ENST00000553338 G2E3Q7L622 706 aa25.02■■□□□ 1.6
IFT43-204ENST00000553338 PASKQ96RG2 1323 aa25.02■■□□□ 1.6
IFT43-204ENST00000553338 CCDC152Q4G0S7 254 aa25.01■■□□□ 1.59
IFT43-204ENST00000553338 MAP1SQ66K74 1059 aaPredicted RBP25.01■■□□□ 1.59
IFT43-204ENST00000553338 SEC31BQ9NQW1 1179 aa25.01■■□□□ 1.59
IFT43-204ENST00000553338 ITGBL1O95965 494 aaPredicted RBP25■■□□□ 1.59
IFT43-204ENST00000553338 IGKV5-2P06315 115 aa25■■□□□ 1.59
IFT43-204ENST00000553338 GPSM2P81274 684 aa25■■□□□ 1.59
IFT43-204ENST00000553338 CIAPIN1Q6FI81 312 aa25■■□□□ 1.59
IFT43-204ENST00000553338 CCDC85AQ96PX6 553 aaPredicted RBP25■■□□□ 1.59
IFT43-204ENST00000553338 C6orf229H3BNL8 230 aa24.99■■□□□ 1.59
IFT43-204ENST00000553338 RAD17O75943 681 aa24.99■■□□□ 1.59
IFT43-204ENST00000553338 WASHC4Q2M389 1173 aa24.99■■□□□ 1.59
IFT43-204ENST00000553338 CNTROBQ8N137 903 aa24.99■■□□□ 1.59
IFT43-204ENST00000553338 CDHR2Q9BYE9 1310 aa24.98■■□□□ 1.59
IFT43-204ENST00000553338 EXOSC9Q06265 439 aaKnown RBP24.98■■□□□ 1.59
IFT43-204ENST00000553338 FLIIQ13045 1269 aa24.98■■□□□ 1.59
IFT43-204ENST00000553338 CWF19L2Q2TBE0 894 aaKnown RBP24.98■■□□□ 1.59
IFT43-204ENST00000553338 GPRC5DQ9NZD1 345 aa24.98■■□□□ 1.59
IFT43-204ENST00000553338 RIMBP2O15034 1052 aa24.97■■□□□ 1.59
IFT43-204ENST00000553338 GMPSP49915 693 aaPredicted RBP24.97■■□□□ 1.59
IFT43-204ENST00000553338 TNIP1Q15025 636 aa24.97■■□□□ 1.59
IFT43-204ENST00000553338 USP50Q70EL3 339 aaPredicted RBP24.97■■□□□ 1.59
IFT43-204ENST00000553338 POLLQ9UGP5 575 aa24.97■■□□□ 1.59
IFT43-204ENST00000553338 MKRN1Q9UHC7 482 aaKnown RBP24.97■■□□□ 1.59
IFT43-204ENST00000553338 YDJCA8MPS7 323 aa24.96■■□□□ 1.59
IFT43-204ENST00000553338 NEURL1BA8MQ27 555 aa24.96■■□□□ 1.59
IFT43-204ENST00000553338 VAMP4O75379 141 aa24.96■■□□□ 1.59
IFT43-204ENST00000553338 FKBP5Q13451 457 aaPredicted RBP24.96■■□□□ 1.59
IFT43-204ENST00000553338 EYA3Q99504 573 aa24.96■■□□□ 1.59
IFT43-204ENST00000553338 BCL2L13Q9BXK5 485 aa24.96■■□□□ 1.59
IFT43-204ENST00000553338 ADARB2Q9NS39 739 aaKnown RBP24.96■■□□□ 1.59
IFT43-204ENST00000553338 TMEM88BA6NKF7 163 aa24.95■■□□□ 1.58
IFT43-204ENST00000553338 CTSWP56202 376 aa24.95■■□□□ 1.58
IFT43-204ENST00000553338 MYH16Q9H6N6 1097 aa24.95■■□□□ 1.58
IFT43-204ENST00000553338 DBNDD1Q9H9R9 158 aa24.95■■□□□ 1.58
IFT43-204ENST00000553338 ANKRD18AQ8IVF6 992 aa24.94■■□□□ 1.58
IFT43-204ENST00000553338 TBC1D16Q8TBP0 767 aa24.94■■□□□ 1.58
IFT43-204ENST00000553338 GPR101Q96P66 508 aaPredicted RBP24.94■■□□□ 1.58
IFT43-204ENST00000553338 SPINK5Q9NQ38 1064 aaPredicted RBP24.94■■□□□ 1.58
IFT43-204ENST00000553338 ANKIB1Q9P2G1 1089 aa24.94■■□□□ 1.58
IFT43-204ENST00000553338 UFL1O94874 794 aa24.92■■□□□ 1.58
IFT43-204ENST00000553338 UBE3BQ7Z3V4 1068 aa24.92■■□□□ 1.58
IFT43-204ENST00000553338 DNAAF4Q8WXU2 420 aa24.92■■□□□ 1.58
IFT43-204ENST00000553338 PODXL2Q9NZ53 605 aa24.92■■□□□ 1.58
IFT43-204ENST00000553338 ECE2O60344 883 aa24.91■■□□□ 1.58
IFT43-204ENST00000553338 DOK7Q18PE1 504 aa24.91■■□□□ 1.58
IFT43-204ENST00000553338 CDC5LQ99459 802 aaKnown RBP24.91■■□□□ 1.58
IFT43-204ENST00000553338 ZC3H12CQ9C0D7 883 aaKnown RBP24.91■■□□□ 1.58
IFT43-204ENST00000553338 GGA1Q9UJY5 639 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms