RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, human

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-217	ENST00000553065	LARGE2	Q8N3Y3	721 aa		13.7	□□□□□ -0.22
DDX23-217	ENST00000553065	JDP2	Q8WYK2	163 aa		13.7	□□□□□ -0.22
DDX23-217	ENST00000553065	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX23-217	ENST00000553065	IQCA1L	A6NCM1	817 aa		13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	IGKV5-2	P06315	115 aa		13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	MAP1S	Q66K74	1059 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	DDX46	Q7L014	1031 aa	Known RBP	13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	RIC3	Q7Z5B4	369 aa		13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	MPND	Q8N594	471 aa		13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	MYD88	Q99836	296 aa		13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	SEC31B	Q9NQW1	1179 aa		13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	POLL	Q9UGP5	575 aa		13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	GJA3	Q9Y6H8	435 aa		13.69	□□□□□ -0.22
DDX23-217	ENST00000553065	DUOX1	Q9NRD9	1551 aa		13.68	□□□□□ -0.22
DDX23-217	ENST00000553065	WTIP	A6NIX2	430 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX23-217	ENST00000553065	IRS4	O14654	1257 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX23-217	ENST00000553065	PPIP5K2	O43314	1243 aa		13.68	□□□□□ -0.22
DDX23-217	ENST00000553065	KIAA2012	Q0VF49	1180 aa		13.68	□□□□□ -0.22
DDX23-217	ENST00000553065	EAPP	Q56P03	285 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX23-217	ENST00000553065	METTL22	Q9BUU2	404 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX23-217	ENST00000553065	VPS33B	Q9H267	617 aa		13.68	□□□□□ -0.22
DDX23-217	ENST00000553065	KCNQ5	Q9NR82	932 aa		13.68	□□□□□ -0.22
DDX23-217	ENST00000553065	SHTN1	A0MZ66	631 aa		13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	HIRA	P54198	1017 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	EIF6	P56537	245 aa	Known RBP	13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	GPSM2	P81274	684 aa		13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	NCBP3	Q53F19	620 aa	Known RBP	13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	DPP8	Q6V1X1	898 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	CNTROB	Q8N137	903 aa		13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	CREBZF	Q9NS37	354 aa		13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	ZNRF3	Q9ULT6	936 aa		13.67	□□□□□ -0.22
DDX23-217	ENST00000553065	ZEB1	P37275	1124 aa	Predicted RBP	13.66	□□□□□ -0.22
DDX23-217	ENST00000553065	CALD1	Q05682	793 aa	Known RBP	13.66	□□□□□ -0.22
DDX23-217	ENST00000553065	CCDC191	Q8NCU4	936 aa		13.66	□□□□□ -0.22
DDX23-217	ENST00000553065	GPR101	Q96P66	508 aa	Predicted RBP	13.66	□□□□□ -0.22
DDX23-217	ENST00000553065	MKRN1	Q9UHC7	482 aa	Known RBP	13.66	□□□□□ -0.22
DDX23-217	ENST00000553065	MAP3K2	Q9Y2U5	619 aa		13.66	□□□□□ -0.22
DDX23-217	ENST00000553065	PI4KAP2	A4QPH2	592 aa		13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	VAMP4	O75379	141 aa		13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	PCCA	P05165	728 aa	Predicted RBP	13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	RPS8	P62241	208 aa	Known RBP	13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	CCDC30	Q5VVM6	783 aa		13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	KSR2	Q6VAB6	950 aa		13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	PNMA8A	Q86V59	439 aa	Predicted RBP	13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	NIM1K	Q8IY84	436 aa		13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	PI4KAP1	Q8N8J0	262 aa		13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	MRS2	Q9HD23	443 aa		13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	GPRC5D	Q9NZD1	345 aa		13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	CLEC11A	Q9Y240	323 aa		13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	SALL2	Q9Y467	1007 aa	Predicted RBP	13.65	□□□□□ -0.22
DDX23-217	ENST00000553065	RAD17	O75943	681 aa		13.64	□□□□□ -0.23
DDX23-217	ENST00000553065	GMPS	P49915	693 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX23-217	ENST00000553065	CST9	Q5W186	159 aa		13.64	□□□□□ -0.23
DDX23-217	ENST00000553065	PGAP2	Q9UHJ9	254 aa		13.64	□□□□□ -0.23
DDX23-217	ENST00000553065	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.64	□□□□□ -0.23
DDX23-217	ENST00000553065	IL16	Q14005	1332 aa		13.64	□□□□□ -0.23
DDX23-217	ENST00000553065	RIMBP2	O15034	1052 aa		13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	SLC4A2	P04920	1241 aa		13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	VEGFB	P49765	207 aa		13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	GOLGA2	Q08379	1002 aa		13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	CWF19L2	Q2TBE0	894 aa	Known RBP	13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	TWISTNB	Q3B726	338 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	DLK2	Q6UY11	383 aa		13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	SUPT20H	Q8NEM7	779 aa		13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	TBC1D16	Q8TBP0	767 aa		13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX23-217	ENST00000553065	LRRC37A	A6NMS7	1700 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	CNTNAP1	P78357	1384 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	TMEM88B	A6NKF7	163 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065		H7C1W4	665 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	TRAF5	O00463	557 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	PDE8A	O60658	829 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	EGFR	P00533	1210 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	HSPA1A	P0DMV8	641 aa	Known RBP	13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	HSPA1B	P0DMV9	641 aa	Known RBP	13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	CASP7	P55210	303 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	CIAPIN1	Q6FI81	312 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	USP50	Q70EL3	339 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	TMC4	Q7Z404	712 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	TTLL11	Q8NHH1	800 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	CWC25	Q9NXE8	425 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	FANCI	Q9NVI1	1328 aa		13.62	□□□□□ -0.23
DDX23-217	ENST00000553065	RTL9	Q8NET4	1388 aa		13.61	□□□□□ -0.23
DDX23-217	ENST00000553065	NEURL1B	A8MQ27	555 aa		13.61	□□□□□ -0.23
DDX23-217	ENST00000553065	DOK7	Q18PE1	504 aa		13.61	□□□□□ -0.23
DDX23-217	ENST00000553065	WASHC4	Q2M389	1173 aa		13.61	□□□□□ -0.23
DDX23-217	ENST00000553065	WDR63	Q8IWG1	891 aa		13.61	□□□□□ -0.23
DDX23-217	ENST00000553065	TRPM4	Q8TD43	1214 aa		13.61	□□□□□ -0.23
DDX23-217	ENST00000553065	DBNDD1	Q9H9R9	158 aa		13.61	□□□□□ -0.23
DDX23-217	ENST00000553065	PODXL2	Q9NZ53	605 aa		13.61	□□□□□ -0.23
DDX23-217	ENST00000553065	PSMD14	O00487	310 aa		13.6	□□□□□ -0.23
DDX23-217	ENST00000553065	ANP32C	O43423	234 aa		13.6	□□□□□ -0.23
DDX23-217	ENST00000553065	EXOSC9	Q06265	439 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-217	ENST00000553065	TMX4	Q9H1E5	349 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX23-217	ENST00000553065	ADARB2	Q9NS39	739 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-217	ENST00000553065	CNOT7	Q9UIV1	285 aa	Known RBP	13.6	□□□□□ -0.23
DDX23-217	ENST00000553065	CDHR2	Q9BYE9	1310 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms