RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 RTKN2Q8IZC4 609 aa12.49□□□□□ -0.41
PFDN5-218ENST00000552742 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
PFDN5-218ENST00000552742 CCDC85AQ96PX6 553 aaPredicted RBP12.49□□□□□ -0.41
PFDN5-218ENST00000552742 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
PFDN5-218ENST00000552742 SEC31BQ9NQW1 1179 aa12.49□□□□□ -0.41
PFDN5-218ENST00000552742 ATP6V0A2Q9Y487 856 aa12.49□□□□□ -0.41
PFDN5-218ENST00000552742 DICER1Q9UPY3 1922 aaKnown RBP12.49□□□□□ -0.41
PFDN5-218ENST00000552742 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
PFDN5-218ENST00000552742 CASP7P55210 303 aa12.48□□□□□ -0.41
PFDN5-218ENST00000552742 CC2D2BQ6DHV5 1058 aa12.48□□□□□ -0.41
PFDN5-218ENST00000552742 SP8Q8IXZ3 490 aa12.48□□□□□ -0.41
PFDN5-218ENST00000552742 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
PFDN5-218ENST00000552742 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
PFDN5-218ENST00000552742 NOB1Q9ULX3 412 aaKnown RBP12.48□□□□□ -0.41
PFDN5-218ENST00000552742 MYH3P11055 1940 aa12.48□□□□□ -0.41
PFDN5-218ENST00000552742 PTPRCP08575 1304 aa12.47□□□□□ -0.41
PFDN5-218ENST00000552742 LTBP3Q9NS15 1303 aa12.47□□□□□ -0.41
PFDN5-218ENST00000552742 RPS8P62241 208 aaKnown RBP12.47□□□□□ -0.41
PFDN5-218ENST00000552742 FKBP4Q02790 459 aaKnown RBP eCLIP12.47□□□□□ -0.41
PFDN5-218ENST00000552742 CCDC152Q4G0S7 254 aa12.47□□□□□ -0.41
PFDN5-218ENST00000552742 TTLL11Q8NHH1 800 aa12.47□□□□□ -0.41
PFDN5-218ENST00000552742 SRCIN1Q9C0H9 1055 aa12.47□□□□□ -0.41
PFDN5-218ENST00000552742 COL4A1P02462 1669 aa12.46□□□□□ -0.41
PFDN5-218ENST00000552742 ALDH1L1O75891 902 aa12.46□□□□□ -0.41
PFDN5-218ENST00000552742 CTSWP56202 376 aa12.46□□□□□ -0.41
PFDN5-218ENST00000552742 TMX4Q9H1E5 349 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-218ENST00000552742 C9orf78Q9NZ63 289 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-218ENST00000552742 GRM8O00222 908 aa12.45□□□□□ -0.42
PFDN5-218ENST00000552742 BCAR3O75815 825 aa12.45□□□□□ -0.42
PFDN5-218ENST00000552742 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
PFDN5-218ENST00000552742 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
PFDN5-218ENST00000552742 PSMD1Q99460 953 aa12.45□□□□□ -0.42
PFDN5-218ENST00000552742 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
PFDN5-218ENST00000552742 GREM2Q9H772 168 aa12.45□□□□□ -0.42
PFDN5-218ENST00000552742 GPBP1L1Q9HC44 474 aaPredicted RBP12.45□□□□□ -0.42
PFDN5-218ENST00000552742 SNED1Q8TER0 1413 aa12.45□□□□□ -0.42
PFDN5-218ENST00000552742 CSF1RP07333 972 aa12.44□□□□□ -0.42
PFDN5-218ENST00000552742 FOXO4P98177 505 aa12.44□□□□□ -0.42
PFDN5-218ENST00000552742 EPHA10Q5JZY3 1008 aa12.44□□□□□ -0.42
PFDN5-218ENST00000552742 TMC4Q7Z404 712 aa12.44□□□□□ -0.42
PFDN5-218ENST00000552742 MPNDQ8N594 471 aa12.44□□□□□ -0.42
PFDN5-218ENST00000552742 NBPF7P0C2Y1 421 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-218ENST00000552742 IARSP41252 1262 aaKnown RBP12.43□□□□□ -0.42
PFDN5-218ENST00000552742 DPP8Q6V1X1 898 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-218ENST00000552742 SPEF2Q9C093 1822 aa12.42□□□□□ -0.42
PFDN5-218ENST00000552742 GLTPD2A6NH11 291 aa12.42□□□□□ -0.42
PFDN5-218ENST00000552742 GPSM2P81274 684 aa12.42□□□□□ -0.42
PFDN5-218ENST00000552742 LMBR1LQ6UX01 489 aa12.42□□□□□ -0.42
PFDN5-218ENST00000552742 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
PFDN5-218ENST00000552742 RTFDC1Q9BY42 306 aaPredicted RBP12.42□□□□□ -0.42
PFDN5-218ENST00000552742 API5Q9BZZ5 524 aaKnown RBP12.42□□□□□ -0.42
PFDN5-218ENST00000552742 USP44Q9H0E7 712 aa12.42□□□□□ -0.42
PFDN5-218ENST00000552742 NMRK2Q9NPI5 230 aa12.42□□□□□ -0.42
PFDN5-218ENST00000552742 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
PFDN5-218ENST00000552742 TIAM2Q8IVF5 1701 aa12.42□□□□□ -0.42
PFDN5-218ENST00000552742 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
PFDN5-218ENST00000552742 ITGA6P23229 1130 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 ARHGAP45Q92619 1136 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 FRAT1Q92837 279 aaPredicted RBP12.41□□□□□ -0.42
PFDN5-218ENST00000552742 KAZALD1Q96I82 304 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 SUCLG2Q96I99 432 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 CDC5LQ99459 802 aaKnown RBP12.41□□□□□ -0.42
PFDN5-218ENST00000552742 RRAGCQ9HB90 399 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 POLLQ9UGP5 575 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 TNNQ9UQP3 1299 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 RTL9Q8NET4 1388 aa12.41□□□□□ -0.42
PFDN5-218ENST00000552742 UTYO14607 1347 aa12.4□□□□□ -0.42
PFDN5-218ENST00000552742 KDM2BQ8NHM5 1336 aa12.4□□□□□ -0.42
PFDN5-218ENST00000552742 WTIPA6NIX2 430 aaPredicted RBP12.4□□□□□ -0.42
PFDN5-218ENST00000552742 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
PFDN5-218ENST00000552742 IPO8O15397 1037 aaKnown RBP12.4□□□□□ -0.42
PFDN5-218ENST00000552742 PPIP5K2O43314 1243 aa12.4□□□□□ -0.42
PFDN5-218ENST00000552742 CCT4P50991 539 aaKnown RBP12.4□□□□□ -0.42
PFDN5-218ENST00000552742 AOC3Q16853 763 aa12.4□□□□□ -0.42
PFDN5-218ENST00000552742 SUPT20HQ8NEM7 779 aa12.4□□□□□ -0.42
PFDN5-218ENST00000552742 JDP2Q8WYK2 163 aa12.4□□□□□ -0.42
PFDN5-218ENST00000552742 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
PFDN5-218ENST00000552742 ANKIB1Q9P2G1 1089 aa12.4□□□□□ -0.42
PFDN5-218ENST00000552742 COL4A5P29400 1685 aa12.4□□□□□ -0.42
PFDN5-218ENST00000552742 LRRC37AA6NMS7 1700 aa12.4□□□□□ -0.43
PFDN5-218ENST00000552742 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
PFDN5-218ENST00000552742 ANKRD18BA2A2Z9 1011 aa12.39□□□□□ -0.43
PFDN5-218ENST00000552742 FZD9O00144 591 aa12.39□□□□□ -0.43
PFDN5-218ENST00000552742 KIF3CO14782 793 aa12.39□□□□□ -0.43
PFDN5-218ENST00000552742 RIMBP2O15034 1052 aa12.39□□□□□ -0.43
PFDN5-218ENST00000552742 DDNO94850 711 aaPredicted RBP12.39□□□□□ -0.43
PFDN5-218ENST00000552742 TBC1D16Q8TBP0 767 aa12.39□□□□□ -0.43
PFDN5-218ENST00000552742 GPR101Q96P66 508 aaPredicted RBP12.39□□□□□ -0.43
PFDN5-218ENST00000552742 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
PFDN5-218ENST00000552742 MINPP1Q9UNW1 487 aa12.39□□□□□ -0.43
PFDN5-218ENST00000552742 POTECB2RU33 542 aa12.38□□□□□ -0.43
PFDN5-218ENST00000552742 TRIM27P14373 513 aa12.38□□□□□ -0.43
PFDN5-218ENST00000552742 IGHMBP2P38935 993 aaKnown RBP12.38□□□□□ -0.43
PFDN5-218ENST00000552742 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
PFDN5-218ENST00000552742 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
PFDN5-218ENST00000552742 CLUAP1Q96AJ1 413 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms