RNA–Protein interactions for RNA: ENST00000551801.1

PACS2-213, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 3

Gene PACS2, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-213ENST00000551801 CCDC93Q567U6 631 aa18.13■□□□□ 0.49
PACS2-213ENST00000551801 SLC4A10Q6U841 1118 aa18.13■□□□□ 0.49
PACS2-213ENST00000551801 H7C1W4 665 aa18.12■□□□□ 0.49
PACS2-213ENST00000551801 C9orf131Q5VYM1 1079 aa18.12■□□□□ 0.49
PACS2-213ENST00000551801 RNF181Q9P0P0 153 aa18.12■□□□□ 0.49
PACS2-213ENST00000551801 PDE8AO60658 829 aa18.11■□□□□ 0.49
PACS2-213ENST00000551801 CTSWP56202 376 aa18.11■□□□□ 0.49
PACS2-213ENST00000551801 GRAPQ13588 217 aa18.11■□□□□ 0.49
PACS2-213ENST00000551801 GRAPLQ8TC17 118 aaPredicted RBP18.11■□□□□ 0.49
PACS2-213ENST00000551801 CELF1Q92879 486 aaKnown RBP18.11■□□□□ 0.49
PACS2-213ENST00000551801 CCDC85AQ96PX6 553 aaPredicted RBP18.11■□□□□ 0.49
PACS2-213ENST00000551801 TAOK3Q9H2K8 898 aa18.11■□□□□ 0.49
PACS2-213ENST00000551801 LTBP3Q9NS15 1303 aa18.11■□□□□ 0.49
PACS2-213ENST00000551801 BRPF1P55201 1214 aaPredicted RBP18.1■□□□□ 0.49
PACS2-213ENST00000551801 SOGA3Q5TF21 947 aa18.1■□□□□ 0.49
PACS2-213ENST00000551801 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
PACS2-213ENST00000551801 ZNF784Q8NCA9 323 aaPredicted RBP18.1■□□□□ 0.49
PACS2-213ENST00000551801 SEC31BQ9NQW1 1179 aa18.1■□□□□ 0.49
PACS2-213ENST00000551801 BCAR3O75815 825 aa18.09■□□□□ 0.49
PACS2-213ENST00000551801 LMNB1P20700 586 aa18.09■□□□□ 0.49
PACS2-213ENST00000551801 SRCIN1Q9C0H9 1055 aa18.09■□□□□ 0.49
PACS2-213ENST00000551801 NOB1Q9ULX3 412 aaKnown RBP18.09■□□□□ 0.49
PACS2-213ENST00000551801 KIF16BQ96L93 1317 aa18.08■□□□□ 0.49
PACS2-213ENST00000551801 GRM8O00222 908 aa18.08■□□□□ 0.48
PACS2-213ENST00000551801 ALDH1L1O75891 902 aa18.08■□□□□ 0.48
PACS2-213ENST00000551801 TNNQ9UQP3 1299 aa18.08■□□□□ 0.48
PACS2-213ENST00000551801 ATP6V0A2Q9Y487 856 aa18.08■□□□□ 0.48
PACS2-213ENST00000551801 RTL9Q8NET4 1388 aa18.07■□□□□ 0.48
PACS2-213ENST00000551801 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
PACS2-213ENST00000551801 CCDC152Q4G0S7 254 aa18.07■□□□□ 0.48
PACS2-213ENST00000551801 TTLL11Q8NHH1 800 aa18.07■□□□□ 0.48
PACS2-213ENST00000551801 PLA2G12BQ9BX93 195 aa18.07■□□□□ 0.48
PACS2-213ENST00000551801 GREM2Q9H772 168 aa18.07■□□□□ 0.48
PACS2-213ENST00000551801 ZNF277Q9NRM2 450 aaPredicted RBP18.07■□□□□ 0.48
PACS2-213ENST00000551801 HSP90B1P14625 803 aaKnown RBP18.06■□□□□ 0.48
PACS2-213ENST00000551801 FAM161AQ3B820 660 aa18.06■□□□□ 0.48
PACS2-213ENST00000551801 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
PACS2-213ENST00000551801 RTKN2Q8IZC4 609 aa18.06■□□□□ 0.48
PACS2-213ENST00000551801 ZNF526Q8TF50 670 aaPredicted RBP18.06■□□□□ 0.48
PACS2-213ENST00000551801 NBPF7P0C2Y1 421 aaPredicted RBP18.05■□□□□ 0.48
PACS2-213ENST00000551801 FOXO4P98177 505 aa18.05■□□□□ 0.48
PACS2-213ENST00000551801 PSMD1Q99460 953 aa18.05■□□□□ 0.48
PACS2-213ENST00000551801 UTYO14607 1347 aa18.04■□□□□ 0.48
PACS2-213ENST00000551801 BBOX1O75936 387 aa18.04■□□□□ 0.48
PACS2-213ENST00000551801 TRIM27P14373 513 aa18.03■□□□□ 0.48
PACS2-213ENST00000551801 CC2D2BQ6DHV5 1058 aa18.03■□□□□ 0.48
PACS2-213ENST00000551801 SP8Q8IXZ3 490 aa18.03■□□□□ 0.48
PACS2-213ENST00000551801 KAZALD1Q96I82 304 aa18.03■□□□□ 0.48
PACS2-213ENST00000551801 SUCLG2Q96I99 432 aa18.03■□□□□ 0.48
PACS2-213ENST00000551801 API5Q9BZZ5 524 aaKnown RBP18.03■□□□□ 0.48
PACS2-213ENST00000551801 C9orf78Q9NZ63 289 aaPredicted RBP18.03■□□□□ 0.48
PACS2-213ENST00000551801 WDR90Q96KV7 1748 aa18.03■□□□□ 0.48
PACS2-213ENST00000551801 RPS8P62241 208 aaKnown RBP18.02■□□□□ 0.48
PACS2-213ENST00000551801 FRAT1Q92837 279 aaPredicted RBP18.02■□□□□ 0.48
PACS2-213ENST00000551801 ZC3H4Q9UPT8 1303 aaKnown RBP18.01■□□□□ 0.47
PACS2-213ENST00000551801 SCN9AQ15858 1988 aa18.01■□□□□ 0.47
PACS2-213ENST00000551801 ZNF646O15015 1829 aaPredicted RBP18.01■□□□□ 0.47
PACS2-213ENST00000551801 CSF1RP07333 972 aa18.01■□□□□ 0.47
PACS2-213ENST00000551801 IARSP41252 1262 aaKnown RBP18.01■□□□□ 0.47
PACS2-213ENST00000551801 GPSM2P81274 684 aa18.01■□□□□ 0.47
PACS2-213ENST00000551801 TMC4Q7Z404 712 aa18.01■□□□□ 0.47
PACS2-213ENST00000551801 YTHDC1Q96MU7 727 aaKnown RBP18.01■□□□□ 0.47
PACS2-213ENST00000551801 USP44Q9H0E7 712 aa18.01■□□□□ 0.47
PACS2-213ENST00000551801 ZNF541Q9H0D2 1346 aa18■□□□□ 0.47
PACS2-213ENST00000551801 PSME4Q14997 1843 aa18■□□□□ 0.47
PACS2-213ENST00000551801 ITGA6P23229 1130 aa18■□□□□ 0.47
PACS2-213ENST00000551801 DPP8Q6V1X1 898 aaPredicted RBP18■□□□□ 0.47
PACS2-213ENST00000551801 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
PACS2-213ENST00000551801 ANKRD18AQ8IVF6 992 aa18■□□□□ 0.47
PACS2-213ENST00000551801 ARHGAP45Q92619 1136 aa18■□□□□ 0.47
PACS2-213ENST00000551801 RTFDC1Q9BY42 306 aaPredicted RBP18■□□□□ 0.47
PACS2-213ENST00000551801 CCT4P50991 539 aaKnown RBP17.99■□□□□ 0.47
PACS2-213ENST00000551801 AOC3Q16853 763 aa17.99■□□□□ 0.47
PACS2-213ENST00000551801 LMBR1LQ6UX01 489 aa17.99■□□□□ 0.47
PACS2-213ENST00000551801 MPNDQ8N594 471 aa17.99■□□□□ 0.47
PACS2-213ENST00000551801 ANKRD44Q8N8A2 993 aa17.99■□□□□ 0.47
PACS2-213ENST00000551801 CLUAP1Q96AJ1 413 aa17.99■□□□□ 0.47
PACS2-213ENST00000551801 CDC5LQ99459 802 aaKnown RBP17.99■□□□□ 0.47
PACS2-213ENST00000551801 BICC1Q9H694 974 aaKnown RBP17.99■□□□□ 0.47
PACS2-213ENST00000551801 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
PACS2-213ENST00000551801 GPR101Q96P66 508 aaPredicted RBP17.98■□□□□ 0.47
PACS2-213ENST00000551801 GPBP1L1Q9HC44 474 aaPredicted RBP17.98■□□□□ 0.47
PACS2-213ENST00000551801 NMRK2Q9NPI5 230 aa17.98■□□□□ 0.47
PACS2-213ENST00000551801 CHMP3Q9Y3E7 222 aa17.98■□□□□ 0.47
PACS2-213ENST00000551801 PPIP5K2O43314 1243 aa17.97■□□□□ 0.47
PACS2-213ENST00000551801 INTS3Q68E01 1043 aaKnown RBP17.97■□□□□ 0.47
PACS2-213ENST00000551801 MEIS3Q99687 375 aa17.97■□□□□ 0.47
PACS2-213ENST00000551801 TMX4Q9H1E5 349 aaPredicted RBP17.97■□□□□ 0.47
PACS2-213ENST00000551801 POLLQ9UGP5 575 aa17.97■□□□□ 0.47
PACS2-213ENST00000551801 NSFL1CQ9UNZ2 370 aaKnown RBP17.97■□□□□ 0.47
PACS2-213ENST00000551801 SCN4AP35499 1836 aa17.96■□□□□ 0.47
PACS2-213ENST00000551801 RABL6Q3YEC7 729 aaPredicted RBP17.96■□□□□ 0.47
PACS2-213ENST00000551801 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.47
PACS2-213ENST00000551801 WTIPA6NIX2 430 aaPredicted RBP17.95■□□□□ 0.46
PACS2-213ENST00000551801 IPO8O15397 1037 aaKnown RBP17.95■□□□□ 0.46
PACS2-213ENST00000551801 RLBP1P12271 317 aa17.95■□□□□ 0.46
PACS2-213ENST00000551801 LARGE2Q8N3Y3 721 aa17.95■□□□□ 0.46
PACS2-213ENST00000551801 TBC1D16Q8TBP0 767 aa17.95■□□□□ 0.46
PACS2-213ENST00000551801 ZNF594Q96JF6 807 aaPredicted RBP17.95■□□□□ 0.46
PACS2-213ENST00000551801 BSDC1Q9NW68 430 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms