RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 WDR33Q9C0J8 1336 aaKnown RBP23.37■■□□□ 1.33
PRPF40B-215ENST00000551418 RAD17O75943 681 aa23.37■■□□□ 1.33
PRPF40B-215ENST00000551418 GMPSP49915 693 aaPredicted RBP23.37■■□□□ 1.33
PRPF40B-215ENST00000551418 GRAPQ13588 217 aa23.37■■□□□ 1.33
PRPF40B-215ENST00000551418 HDGFL1Q5TGJ6 251 aa23.37■■□□□ 1.33
PRPF40B-215ENST00000551418 USP50Q70EL3 339 aaPredicted RBP23.37■■□□□ 1.33
PRPF40B-215ENST00000551418 DDX46Q7L014 1031 aaKnown RBP23.37■■□□□ 1.33
PRPF40B-215ENST00000551418 GRAPLQ8TC17 118 aaPredicted RBP23.37■■□□□ 1.33
PRPF40B-215ENST00000551418 FAM89AQ96GI7 184 aa23.37■■□□□ 1.33
PRPF40B-215ENST00000551418 SHTN1A0MZ66 631 aa23.36■■□□□ 1.33
PRPF40B-215ENST00000551418 LBX1P52954 281 aa23.36■■□□□ 1.33
PRPF40B-215ENST00000551418 WDR43Q15061 677 aaKnown RBP eCLIP23.36■■□□□ 1.33
PRPF40B-215ENST00000551418 SUPT20HQ8NEM7 779 aa23.36■■□□□ 1.33
PRPF40B-215ENST00000551418 PLBD2Q8NHP8 589 aa23.36■■□□□ 1.33
PRPF40B-215ENST00000551418 ISCA1Q9BUE6 129 aa23.36■■□□□ 1.33
PRPF40B-215ENST00000551418 VPS33BQ9H267 617 aa23.36■■□□□ 1.33
PRPF40B-215ENST00000551418 TRPM7Q96QT4 1865 aa23.36■■□□□ 1.33
PRPF40B-215ENST00000551418 DUOX1Q9NRD9 1551 aa23.35■■□□□ 1.33
PRPF40B-215ENST00000551418 YDJCA8MPS7 323 aa23.35■■□□□ 1.33
PRPF40B-215ENST00000551418 CTCFP49711 727 aaPredicted RBP23.35■■□□□ 1.33
PRPF40B-215ENST00000551418 KIAA2012Q0VF49 1180 aa23.35■■□□□ 1.33
PRPF40B-215ENST00000551418 RTL5Q5HYW3 569 aaPredicted RBP23.35■■□□□ 1.33
PRPF40B-215ENST00000551418 ANKRD13DQ6ZTN6 518 aa23.35■■□□□ 1.33
PRPF40B-215ENST00000551418 AIDAQ96BJ3 306 aa23.35■■□□□ 1.33
PRPF40B-215ENST00000551418 PRDM10Q9NQV6 1147 aa23.35■■□□□ 1.33
PRPF40B-215ENST00000551418 HIRAP54198 1017 aaPredicted RBP23.34■■□□□ 1.33
PRPF40B-215ENST00000551418 DUSP27Q5VZP5 1158 aa23.34■■□□□ 1.33
PRPF40B-215ENST00000551418 CELF1Q92879 486 aaKnown RBP23.34■■□□□ 1.33
PRPF40B-215ENST00000551418 ADARB2Q9NS39 739 aaKnown RBP23.34■■□□□ 1.33
PRPF40B-215ENST00000551418 CIAPIN1Q6FI81 312 aa23.33■■□□□ 1.33
PRPF40B-215ENST00000551418 MBIPQ9NS73 344 aa23.33■■□□□ 1.33
PRPF40B-215ENST00000551418 GRM1Q13255 1194 aa23.32■■□□□ 1.32
PRPF40B-215ENST00000551418 CYP4F22Q6NT55 531 aa23.32■■□□□ 1.32
PRPF40B-215ENST00000551418 CFAP44Q96MT7 982 aa23.32■■□□□ 1.32
PRPF40B-215ENST00000551418 GLIS2Q9BZE0 524 aaPredicted RBP23.32■■□□□ 1.32
PRPF40B-215ENST00000551418 DBF4Q9UBU7 674 aaPredicted RBP23.32■■□□□ 1.32
PRPF40B-215ENST00000551418 LRRC37AA6NMS7 1700 aa23.31■■□□□ 1.32
PRPF40B-215ENST00000551418 HSPA8P11142 646 aaKnown RBP23.31■■□□□ 1.32
PRPF40B-215ENST00000551418 TRPM4Q8TD43 1214 aa23.31■■□□□ 1.32
PRPF40B-215ENST00000551418 CAPNS2Q96L46 248 aa23.31■■□□□ 1.32
PRPF40B-215ENST00000551418 HOXB7P09629 217 aa23.3■■□□□ 1.32
PRPF40B-215ENST00000551418 DLK2Q6UY11 383 aa23.3■■□□□ 1.32
PRPF40B-215ENST00000551418 PAXIP1Q6ZW49 1069 aaPredicted RBP23.3■■□□□ 1.32
PRPF40B-215ENST00000551418 ELL2O00472 640 aaPredicted RBP23.29■■□□□ 1.32
PRPF40B-215ENST00000551418 ZNF853P0CG23 659 aa23.29■■□□□ 1.32
PRPF40B-215ENST00000551418 SF3B3Q15393 1217 aaKnown RBP23.29■■□□□ 1.32
PRPF40B-215ENST00000551418 GPR101Q96P66 508 aaPredicted RBP23.29■■□□□ 1.32
PRPF40B-215ENST00000551418 BCL2L13Q9BXK5 485 aa23.29■■□□□ 1.32
PRPF40B-215ENST00000551418 PHAXQ9H814 394 aaKnown RBP23.29■■□□□ 1.32
PRPF40B-215ENST00000551418 KCNQ5Q9NR82 932 aa23.29■■□□□ 1.32
PRPF40B-215ENST00000551418 ZBTB12Q9Y330 459 aaPredicted RBP23.29■■□□□ 1.32
PRPF40B-215ENST00000551418 RIMBP2O15034 1052 aa23.28■■□□□ 1.32
PRPF40B-215ENST00000551418 GPSM2P81274 684 aa23.28■■□□□ 1.32
PRPF40B-215ENST00000551418 TNIP1Q15025 636 aa23.28■■□□□ 1.32
PRPF40B-215ENST00000551418 HYPKQ9NX55 129 aa23.28■■□□□ 1.32
PRPF40B-215ENST00000551418 POLLQ9UGP5 575 aa23.28■■□□□ 1.32
PRPF40B-215ENST00000551418 PGAP2Q9UHJ9 254 aa23.28■■□□□ 1.32
PRPF40B-215ENST00000551418 CNOT7Q9UIV1 285 aaKnown RBP23.28■■□□□ 1.32
PRPF40B-215ENST00000551418 NSFL1CQ9UNZ2 370 aaKnown RBP23.28■■□□□ 1.32
PRPF40B-215ENST00000551418 TLL2Q9Y6L7 1015 aa23.28■■□□□ 1.32
PRPF40B-215ENST00000551418 APAF1O14727 1248 aa23.27■■□□□ 1.32
PRPF40B-215ENST00000551418 AOC2O75106 756 aa23.27■■□□□ 1.32
PRPF40B-215ENST00000551418 JARID2Q92833 1246 aaPredicted RBP23.27■■□□□ 1.32
PRPF40B-215ENST00000551418 PRKRIP1Q9H875 184 aaPredicted RBP23.27■■□□□ 1.32
PRPF40B-215ENST00000551418 DBNDD1Q9H9R9 158 aa23.27■■□□□ 1.32
PRPF40B-215ENST00000551418 IRS4O14654 1257 aaPredicted RBP23.26■■□□□ 1.31
PRPF40B-215ENST00000551418 CELF2O95319 508 aaKnown RBP23.26■■□□□ 1.31
PRPF40B-215ENST00000551418 MAP2K1Q02750 393 aaPredicted RBP23.26■■□□□ 1.31
PRPF40B-215ENST00000551418 WASHC4Q2M389 1173 aa23.26■■□□□ 1.31
PRPF40B-215ENST00000551418 THSD7BQ9C0I4 1608 aa23.26■■□□□ 1.31
PRPF40B-215ENST00000551418 PSMD14O00487 310 aa23.25■■□□□ 1.31
PRPF40B-215ENST00000551418 TRIM28Q13263 835 aaKnown RBP23.25■■□□□ 1.31
PRPF40B-215ENST00000551418 TMC4Q7Z404 712 aa23.25■■□□□ 1.31
PRPF40B-215ENST00000551418 SEC31BQ9NQW1 1179 aa23.25■■□□□ 1.31
PRPF40B-215ENST00000551418 POLR2AP24928 1970 aaKnown RBP23.25■■□□□ 1.31
PRPF40B-215ENST00000551418 C6orf229H3BNL8 230 aa23.24■■□□□ 1.31
PRPF40B-215ENST00000551418 EGFRP00533 1210 aa23.24■■□□□ 1.31
PRPF40B-215ENST00000551418 DOK7Q18PE1 504 aa23.24■■□□□ 1.31
PRPF40B-215ENST00000551418 SAMD7Q7Z3H4 446 aa23.24■■□□□ 1.31
PRPF40B-215ENST00000551418 RIC3Q7Z5B4 369 aa23.24■■□□□ 1.31
PRPF40B-215ENST00000551418 SAPCD2Q86UD0 394 aa23.24■■□□□ 1.31
PRPF40B-215ENST00000551418 MICALL2Q8IY33 904 aa23.24■■□□□ 1.31
PRPF40B-215ENST00000551418 C8orf58Q8NAV2 365 aa23.24■■□□□ 1.31
PRPF40B-215ENST00000551418 ZNF408Q9H9D4 720 aa23.23■■□□□ 1.31
PRPF40B-215ENST00000551418 TSKSQ9UJT2 592 aa23.23■■□□□ 1.31
PRPF40B-215ENST00000551418 ECE1P42892 770 aa23.22■■□□□ 1.31
PRPF40B-215ENST00000551418 RPS8P62241 208 aaKnown RBP23.22■■□□□ 1.31
PRPF40B-215ENST00000551418 USP48Q86UV5 1035 aa23.22■■□□□ 1.31
PRPF40B-215ENST00000551418 MYD88Q99836 296 aa23.22■■□□□ 1.31
PRPF40B-215ENST00000551418 CDHR2Q9BYE9 1310 aa23.22■■□□□ 1.31
PRPF40B-215ENST00000551418 TBC1D10BQ4KMP7 808 aaPredicted RBP23.21■■□□□ 1.31
PRPF40B-215ENST00000551418 TBC1D16Q8TBP0 767 aa23.21■■□□□ 1.31
PRPF40B-215ENST00000551418 ZC3H15Q8WU90 426 aaKnown RBP23.21■■□□□ 1.31
PRPF40B-215ENST00000551418 IFT57Q9NWB7 429 aa23.21■■□□□ 1.31
PRPF40B-215ENST00000551418 RTL9Q8NET4 1388 aa23.21■■□□□ 1.31
PRPF40B-215ENST00000551418 SCN9AQ15858 1988 aa23.21■■□□□ 1.31
PRPF40B-215ENST00000551418 H7C1D1 291 aa23.2■■□□□ 1.3
PRPF40B-215ENST00000551418 ECE2O60344 883 aa23.2■■□□□ 1.3
PRPF40B-215ENST00000551418 ZBTB38Q8NAP3 1195 aaPredicted RBP23.2■■□□□ 1.3
PRPF40B-215ENST00000551418 CCDC85AQ96PX6 553 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms