RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 IARSP41252 1262 aaKnown RBP12.54□□□□□ -0.4
HDAC7-229ENST00000549883 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
HDAC7-229ENST00000549883 FKBP5Q13451 457 aaPredicted RBP12.54□□□□□ -0.4
HDAC7-229ENST00000549883 GRAPQ13588 217 aa12.54□□□□□ -0.4
HDAC7-229ENST00000549883 DDX46Q7L014 1031 aaKnown RBP12.54□□□□□ -0.4
HDAC7-229ENST00000549883 GRAPLQ8TC17 118 aaPredicted RBP12.54□□□□□ -0.4
HDAC7-229ENST00000549883 SEC31BQ9NQW1 1179 aa12.54□□□□□ -0.4
HDAC7-229ENST00000549883 DUOX1Q9NRD9 1551 aa12.54□□□□□ -0.4
HDAC7-229ENST00000549883 ZC3H4Q9UPT8 1303 aaKnown RBP12.54□□□□□ -0.4
HDAC7-229ENST00000549883 PSMD1Q99460 953 aa12.53□□□□□ -0.4
HDAC7-229ENST00000549883 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
HDAC7-229ENST00000549883 BBOX1O75936 387 aa12.52□□□□□ -0.41
HDAC7-229ENST00000549883 CC2D2BQ6DHV5 1058 aa12.52□□□□□ -0.41
HDAC7-229ENST00000549883 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.41
HDAC7-229ENST00000549883 SP8Q8IXZ3 490 aa12.52□□□□□ -0.41
HDAC7-229ENST00000549883 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
HDAC7-229ENST00000549883 LTBP1Q14766 1721 aa12.51□□□□□ -0.41
HDAC7-229ENST00000549883 H7C1W4 665 aa12.51□□□□□ -0.41
HDAC7-229ENST00000549883 TOMM70O94826 608 aa12.51□□□□□ -0.41
HDAC7-229ENST00000549883 CASP7P55210 303 aa12.51□□□□□ -0.41
HDAC7-229ENST00000549883 GCKRQ14397 625 aa12.51□□□□□ -0.41
HDAC7-229ENST00000549883 AOC3Q16853 763 aa12.51□□□□□ -0.41
HDAC7-229ENST00000549883 TRMT2AQ8IZ69 625 aaKnown RBP12.51□□□□□ -0.41
HDAC7-229ENST00000549883 E9PSI1 815 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 FZD9O00144 591 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 PDE8AO60658 829 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 POTEJP0CG39 1038 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 NEXNQ0ZGT2 675 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 MPNDQ8N594 471 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 MRPL50Q8N5N7 158 aaKnown RBP12.5□□□□□ -0.41
HDAC7-229ENST00000549883 GPR101Q96P66 508 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-229ENST00000549883 BCL2L13Q9BXK5 485 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 CDHR2Q9BYE9 1310 aa12.5□□□□□ -0.41
HDAC7-229ENST00000549883 WTIPA6NIX2 430 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-229ENST00000549883 PPIP5K2O43314 1243 aa12.49□□□□□ -0.41
HDAC7-229ENST00000549883 VEGFAP15692 232 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-229ENST00000549883 CTSWP56202 376 aa12.49□□□□□ -0.41
HDAC7-229ENST00000549883 RPS8P62241 208 aaKnown RBP12.49□□□□□ -0.41
HDAC7-229ENST00000549883 GPSM2P81274 684 aa12.49□□□□□ -0.41
HDAC7-229ENST00000549883 BEND3Q5T5X7 828 aa12.49□□□□□ -0.41
HDAC7-229ENST00000549883 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-229ENST00000549883 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
HDAC7-229ENST00000549883 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
HDAC7-229ENST00000549883 SSH1Q8WYL5 1049 aa12.49□□□□□ -0.41
HDAC7-229ENST00000549883 RTFDC1Q9BY42 306 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-229ENST00000549883 GREM2Q9H772 168 aa12.49□□□□□ -0.41
HDAC7-229ENST00000549883 SCN4AP35499 1836 aa12.48□□□□□ -0.41
HDAC7-229ENST00000549883 LINS1Q8NG48 757 aa12.48□□□□□ -0.41
HDAC7-229ENST00000549883 POLLQ9UGP5 575 aa12.48□□□□□ -0.41
HDAC7-229ENST00000549883 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
HDAC7-229ENST00000549883 HTRA3P83110 453 aa12.47□□□□□ -0.41
HDAC7-229ENST00000549883 CCDC152Q4G0S7 254 aa12.47□□□□□ -0.41
HDAC7-229ENST00000549883 SLC4A10Q6U841 1118 aa12.47□□□□□ -0.41
HDAC7-229ENST00000549883 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
HDAC7-229ENST00000549883 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
HDAC7-229ENST00000549883 JDP2Q8WYK2 163 aa12.47□□□□□ -0.41
HDAC7-229ENST00000549883 GJA3Q9Y6H8 435 aa12.47□□□□□ -0.41
HDAC7-229ENST00000549883 SCN9AQ15858 1988 aa12.47□□□□□ -0.41
HDAC7-229ENST00000549883 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
HDAC7-229ENST00000549883 HSPA6P17066 643 aa12.46□□□□□ -0.41
HDAC7-229ENST00000549883 KIAA2012Q0VF49 1180 aa12.46□□□□□ -0.41
HDAC7-229ENST00000549883 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
HDAC7-229ENST00000549883 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.41
HDAC7-229ENST00000549883 NIM1KQ8IY84 436 aa12.46□□□□□ -0.41
HDAC7-229ENST00000549883 L3MBTL3Q96JM7 780 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-229ENST00000549883 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
HDAC7-229ENST00000549883 FOXO4P98177 505 aa12.45□□□□□ -0.42
HDAC7-229ENST00000549883 CXCL9Q07325 125 aa12.45□□□□□ -0.42
HDAC7-229ENST00000549883 FAM161AQ3B820 660 aa12.45□□□□□ -0.42
HDAC7-229ENST00000549883 TMC4Q7Z404 712 aa12.45□□□□□ -0.42
HDAC7-229ENST00000549883 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
HDAC7-229ENST00000549883 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
HDAC7-229ENST00000549883 TMX4Q9H1E5 349 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-229ENST00000549883 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-229ENST00000549883 KCNQ5Q9NR82 932 aa12.45□□□□□ -0.42
HDAC7-229ENST00000549883 ADAMTSL1Q8N6G6 1762 aa12.44□□□□□ -0.42
HDAC7-229ENST00000549883 C6orf229H3BNL8 230 aa12.44□□□□□ -0.42
HDAC7-229ENST00000549883 HSP90B1P14625 803 aaKnown RBP12.44□□□□□ -0.42
HDAC7-229ENST00000549883 SCNN1DP51172 638 aa12.44□□□□□ -0.42
HDAC7-229ENST00000549883 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
HDAC7-229ENST00000549883 DOK7Q18PE1 504 aa12.44□□□□□ -0.42
HDAC7-229ENST00000549883 ANKRD18AQ8IVF6 992 aa12.44□□□□□ -0.42
HDAC7-229ENST00000549883 GPC2Q8N158 579 aa12.44□□□□□ -0.42
HDAC7-229ENST00000549883 SUPT20HQ8NEM7 779 aa12.44□□□□□ -0.42
HDAC7-229ENST00000549883 DBNDD1Q9H9R9 158 aa12.44□□□□□ -0.42
HDAC7-229ENST00000549883 A0A1B0GUL6 1792 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 SHTN1A0MZ66 631 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 GRM8O00222 908 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 RAD17O75943 681 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 CSF1RP07333 972 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 EPS15P42566 896 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 KAZALD1Q96I82 304 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 SMC4Q9NTJ3 1288 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 ZNRF3Q9ULT6 936 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 RTL9Q8NET4 1388 aa12.43□□□□□ -0.42
HDAC7-229ENST00000549883 UFL1O94874 794 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 NBPF7P0C2Y1 421 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms