RNA–Protein interactions for RNA: ENST00000549718.5

LINC00661-205, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-205ENST00000549718 SP8Q8IXZ3 490 aa20.84■□□□□ 0.93
LINC00661-205ENST00000549718 CACNA1FO60840 1977 aa20.83■□□□□ 0.93
LINC00661-205ENST00000549718 EPHX2P34913 555 aa20.83■□□□□ 0.93
LINC00661-205ENST00000549718 EAPPQ56P03 285 aaPredicted RBP20.83■□□□□ 0.93
LINC00661-205ENST00000549718 NIM1KQ8IY84 436 aa20.83■□□□□ 0.93
LINC00661-205ENST00000549718 SUPT20HQ8NEM7 779 aa20.83■□□□□ 0.93
LINC00661-205ENST00000549718 CHMP4AQ9BY43 222 aa20.83■□□□□ 0.93
LINC00661-205ENST00000549718 GJA3Q9Y6H8 435 aa20.83■□□□□ 0.93
LINC00661-205ENST00000549718 DPP8Q6V1X1 898 aaPredicted RBP20.82■□□□□ 0.92
LINC00661-205ENST00000549718 MYD88Q99836 296 aa20.82■□□□□ 0.92
LINC00661-205ENST00000549718 RTFDC1Q9BY42 306 aaPredicted RBP20.82■□□□□ 0.92
LINC00661-205ENST00000549718 IRS4O14654 1257 aaPredicted RBP20.81■□□□□ 0.92
LINC00661-205ENST00000549718 SF3B3Q15393 1217 aaKnown RBP20.81■□□□□ 0.92
LINC00661-205ENST00000549718 TMC4Q7Z404 712 aa20.81■□□□□ 0.92
LINC00661-205ENST00000549718 MPNDQ8N594 471 aa20.81■□□□□ 0.92
LINC00661-205ENST00000549718 VPS33BQ9H267 617 aa20.81■□□□□ 0.92
LINC00661-205ENST00000549718 SPEF2Q9C093 1822 aa20.81■□□□□ 0.92
LINC00661-205ENST00000549718 IL16Q14005 1332 aa20.8■□□□□ 0.92
LINC00661-205ENST00000549718 DDX58O95786 925 aaKnown RBP20.8■□□□□ 0.92
LINC00661-205ENST00000549718 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
LINC00661-205ENST00000549718 JMYQ8N9B5 988 aa20.8■□□□□ 0.92
LINC00661-205ENST00000549718 PNMA8AQ86V59 439 aaPredicted RBP20.79■□□□□ 0.92
LINC00661-205ENST00000549718 ZBTB38Q8NAP3 1195 aaPredicted RBP20.79■□□□□ 0.92
LINC00661-205ENST00000549718 CELF1Q92879 486 aaKnown RBP20.79■□□□□ 0.92
LINC00661-205ENST00000549718 PASKQ96RG2 1323 aa20.78■□□□□ 0.92
LINC00661-205ENST00000549718 LMOD1P29536 600 aaPredicted RBP20.78■□□□□ 0.92
LINC00661-205ENST00000549718 TWISTNBQ3B726 338 aaPredicted RBP20.78■□□□□ 0.92
LINC00661-205ENST00000549718 CCDC191Q8NCU4 936 aa20.78■□□□□ 0.92
LINC00661-205ENST00000549718 METTL22Q9BUU2 404 aaPredicted RBP20.78■□□□□ 0.92
LINC00661-205ENST00000549718 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
LINC00661-205ENST00000549718 CLEC11AQ9Y240 323 aa20.78■□□□□ 0.92
LINC00661-205ENST00000549718 SCNN1DP51172 638 aa20.77■□□□□ 0.92
LINC00661-205ENST00000549718 KIAA2012Q0VF49 1180 aa20.77■□□□□ 0.92
LINC00661-205ENST00000549718 CREBZFQ9NS37 354 aa20.77■□□□□ 0.92
LINC00661-205ENST00000549718 CWC25Q9NXE8 425 aaPredicted RBP20.77■□□□□ 0.92
LINC00661-205ENST00000549718 ZNRF3Q9ULT6 936 aa20.77■□□□□ 0.92
LINC00661-205ENST00000549718 MAP3K2Q9Y2U5 619 aa20.77■□□□□ 0.92
LINC00661-205ENST00000549718 FANCIQ9NVI1 1328 aa20.77■□□□□ 0.91
LINC00661-205ENST00000549718 PCCAP05165 728 aaPredicted RBP20.76■□□□□ 0.91
LINC00661-205ENST00000549718 HSP90B1P14625 803 aaKnown RBP20.75■□□□□ 0.91
LINC00661-205ENST00000549718 KSR2Q6VAB6 950 aa20.75■□□□□ 0.91
LINC00661-205ENST00000549718 SALL2Q9Y467 1007 aaPredicted RBP20.75■□□□□ 0.91
LINC00661-205ENST00000549718 TRPM7Q96QT4 1865 aa20.75■□□□□ 0.91
LINC00661-205ENST00000549718 PI4KAP2A4QPH2 592 aa20.74■□□□□ 0.91
LINC00661-205ENST00000549718 ITGBL1O95965 494 aaPredicted RBP20.74■□□□□ 0.91
LINC00661-205ENST00000549718 EPS15P42566 896 aa20.74■□□□□ 0.91
LINC00661-205ENST00000549718 CXCL9Q07325 125 aa20.74■□□□□ 0.91
LINC00661-205ENST00000549718 PI4KAP1Q8N8J0 262 aa20.74■□□□□ 0.91
LINC00661-205ENST00000549718 MAP1SQ66K74 1059 aaPredicted RBP20.73■□□□□ 0.91
LINC00661-205ENST00000549718 JARID2Q92833 1246 aaPredicted RBP20.73■□□□□ 0.91
LINC00661-205ENST00000549718 SEC31BQ9NQW1 1179 aa20.73■□□□□ 0.91
LINC00661-205ENST00000549718 NSFL1CQ9UNZ2 370 aaKnown RBP20.73■□□□□ 0.91
LINC00661-205ENST00000549718 CDHR2Q9BYE9 1310 aa20.73■□□□□ 0.91
LINC00661-205ENST00000549718 PDE8AO60658 829 aa20.72■□□□□ 0.91
LINC00661-205ENST00000549718 IGKV5-2P06315 115 aa20.72■□□□□ 0.91
LINC00661-205ENST00000549718 RPS8P62241 208 aaKnown RBP20.72■□□□□ 0.91
LINC00661-205ENST00000549718 CCDC152Q4G0S7 254 aa20.72■□□□□ 0.91
LINC00661-205ENST00000549718 CIAPIN1Q6FI81 312 aa20.72■□□□□ 0.91
LINC00661-205ENST00000549718 G2E3Q7L622 706 aa20.72■□□□□ 0.91
LINC00661-205ENST00000549718 WDR63Q8IWG1 891 aa20.72■□□□□ 0.91
LINC00661-205ENST00000549718 PSME4Q14997 1843 aa20.71■□□□□ 0.91
LINC00661-205ENST00000549718 SLC4A2P04920 1241 aa20.71■□□□□ 0.91
LINC00661-205ENST00000549718 GPSM2P81274 684 aa20.71■□□□□ 0.91
LINC00661-205ENST00000549718 NEXNQ0ZGT2 675 aa20.71■□□□□ 0.91
LINC00661-205ENST00000549718 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
LINC00661-205ENST00000549718 CNTROBQ8N137 903 aa20.71■□□□□ 0.91
LINC00661-205ENST00000549718 GPRC5DQ9NZD1 345 aa20.71■□□□□ 0.91
LINC00661-205ENST00000549718 MKRN1Q9UHC7 482 aaKnown RBP20.71■□□□□ 0.91
LINC00661-205ENST00000549718 SCN9AQ15858 1988 aa20.7■□□□□ 0.9
LINC00661-205ENST00000549718 YDJCA8MPS7 323 aa20.7■□□□□ 0.9
LINC00661-205ENST00000549718 RAD17O75943 681 aa20.7■□□□□ 0.9
LINC00661-205ENST00000549718 WASHC4Q2M389 1173 aa20.7■□□□□ 0.9
LINC00661-205ENST00000549718 USP50Q70EL3 339 aaPredicted RBP20.7■□□□□ 0.9
LINC00661-205ENST00000549718 CCDC85AQ96PX6 553 aaPredicted RBP20.7■□□□□ 0.9
LINC00661-205ENST00000549718 TMEM88BA6NKF7 163 aa20.69■□□□□ 0.9
LINC00661-205ENST00000549718 C6orf229H3BNL8 230 aa20.69■□□□□ 0.9
LINC00661-205ENST00000549718 GMPSP49915 693 aaPredicted RBP20.69■□□□□ 0.9
LINC00661-205ENST00000549718 FLIIQ13045 1269 aa20.69■□□□□ 0.9
LINC00661-205ENST00000549718 CWF19L2Q2TBE0 894 aaKnown RBP20.69■□□□□ 0.9
LINC00661-205ENST00000549718 POLLQ9UGP5 575 aa20.69■□□□□ 0.9
LINC00661-205ENST00000549718 CNTNAP1P78357 1384 aa20.69■□□□□ 0.9
LINC00661-205ENST00000549718 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
LINC00661-205ENST00000549718 TNIP1Q15025 636 aa20.68■□□□□ 0.9
LINC00661-205ENST00000549718 BCL2L13Q9BXK5 485 aa20.68■□□□□ 0.9
LINC00661-205ENST00000549718 DBNDD1Q9H9R9 158 aa20.68■□□□□ 0.9
LINC00661-205ENST00000549718 ADARB2Q9NS39 739 aaKnown RBP20.68■□□□□ 0.9
LINC00661-205ENST00000549718 RIMBP2O15034 1052 aa20.67■□□□□ 0.9
LINC00661-205ENST00000549718 CTSWP56202 376 aa20.67■□□□□ 0.9
LINC00661-205ENST00000549718 EXOSC9Q06265 439 aaKnown RBP20.67■□□□□ 0.9
LINC00661-205ENST00000549718 TBC1D16Q8TBP0 767 aa20.67■□□□□ 0.9
LINC00661-205ENST00000549718 GPR101Q96P66 508 aaPredicted RBP20.67■□□□□ 0.9
LINC00661-205ENST00000549718 EYA3Q99504 573 aa20.67■□□□□ 0.9
LINC00661-205ENST00000549718 PCNTO95613 3336 aa20.66■□□□□ 0.9
LINC00661-205ENST00000549718 VAMP4O75379 141 aa20.66■□□□□ 0.9
LINC00661-205ENST00000549718 FKBP5Q13451 457 aaPredicted RBP20.66■□□□□ 0.9
LINC00661-205ENST00000549718 SPINK5Q9NQ38 1064 aaPredicted RBP20.66■□□□□ 0.9
LINC00661-205ENST00000549718 PODXL2Q9NZ53 605 aa20.66■□□□□ 0.9
LINC00661-205ENST00000549718 ECE2O60344 883 aa20.65■□□□□ 0.9
LINC00661-205ENST00000549718 UFL1O94874 794 aa20.65■□□□□ 0.9
LINC00661-205ENST00000549718 HSPA1AP0DMV8 641 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms