RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 GOLGA2Q08379 1002 aa20.38■□□□□ 0.85
CDK4-206ENST00000549606 VPS33BQ9H267 617 aa20.38■□□□□ 0.85
CDK4-206ENST00000549606 MKRN1Q9UHC7 482 aaKnown RBP20.38■□□□□ 0.85
CDK4-206ENST00000549606 LTBP1Q14766 1721 aa20.37■□□□□ 0.85
CDK4-206ENST00000549606 ITGBL1O95965 494 aaPredicted RBP20.37■□□□□ 0.85
CDK4-206ENST00000549606 RTFDC1Q9BY42 306 aaPredicted RBP20.37■□□□□ 0.85
CDK4-206ENST00000549606 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
CDK4-206ENST00000549606 SCNN1DP51172 638 aa20.36■□□□□ 0.85
CDK4-206ENST00000549606 MAP1SQ66K74 1059 aaPredicted RBP20.36■□□□□ 0.85
CDK4-206ENST00000549606 CNTROBQ8N137 903 aa20.36■□□□□ 0.85
CDK4-206ENST00000549606 EPS15P42566 896 aa20.35■□□□□ 0.85
CDK4-206ENST00000549606 TRIM28Q13263 835 aaKnown RBP20.35■□□□□ 0.85
CDK4-206ENST00000549606 MYD88Q99836 296 aa20.35■□□□□ 0.85
CDK4-206ENST00000549606 ZNRF3Q9ULT6 936 aa20.35■□□□□ 0.85
CDK4-206ENST00000549606 IRS4O14654 1257 aaPredicted RBP20.34■□□□□ 0.85
CDK4-206ENST00000549606 SF3B3Q15393 1217 aaKnown RBP20.34■□□□□ 0.85
CDK4-206ENST00000549606 CCDC30Q5VVM6 783 aa20.34■□□□□ 0.85
CDK4-206ENST00000549606 TMC4Q7Z404 712 aa20.34■□□□□ 0.85
CDK4-206ENST00000549606 CELF1Q92879 486 aaKnown RBP20.34■□□□□ 0.85
CDK4-206ENST00000549606 TMEM88BA6NKF7 163 aa20.33■□□□□ 0.85
CDK4-206ENST00000549606 CXCL9Q07325 125 aa20.33■□□□□ 0.85
CDK4-206ENST00000549606 KIAA2012Q0VF49 1180 aa20.33■□□□□ 0.85
CDK4-206ENST00000549606 TSPYL6Q8N831 410 aa20.33■□□□□ 0.85
CDK4-206ENST00000549606 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.85
CDK4-206ENST00000549606 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
CDK4-206ENST00000549606 LRRC37AA6NMS7 1700 aa20.33■□□□□ 0.84
CDK4-206ENST00000549606 HSPA1AP0DMV8 641 aaKnown RBP20.32■□□□□ 0.84
CDK4-206ENST00000549606 HSPA1BP0DMV9 641 aaKnown RBP20.32■□□□□ 0.84
CDK4-206ENST00000549606 ZBTB38Q8NAP3 1195 aaPredicted RBP20.32■□□□□ 0.84
CDK4-206ENST00000549606 NSFL1CQ9UNZ2 370 aaKnown RBP20.32■□□□□ 0.84
CDK4-206ENST00000549606 DDX58O95786 925 aaKnown RBP20.31■□□□□ 0.84
CDK4-206ENST00000549606 COL13A1Q5TAT6 717 aaPredicted RBP20.31■□□□□ 0.84
CDK4-206ENST00000549606 DUOX1Q9NRD9 1551 aa20.3■□□□□ 0.84
CDK4-206ENST00000549606 COL4A1P02462 1669 aa20.3■□□□□ 0.84
CDK4-206ENST00000549606 RAD17O75943 681 aa20.3■□□□□ 0.84
CDK4-206ENST00000549606 CIAPIN1Q6FI81 312 aa20.3■□□□□ 0.84
CDK4-206ENST00000549606 USP50Q70EL3 339 aaPredicted RBP20.3■□□□□ 0.84
CDK4-206ENST00000549606 WWC1Q8IX03 1113 aa20.3■□□□□ 0.84
CDK4-206ENST00000549606 JARID2Q92833 1246 aaPredicted RBP20.3■□□□□ 0.84
CDK4-206ENST00000549606 MRS2Q9HD23 443 aa20.3■□□□□ 0.84
CDK4-206ENST00000549606 GPRC5DQ9NZD1 345 aa20.3■□□□□ 0.84
CDK4-206ENST00000549606 CNTNAP1P78357 1384 aa20.3■□□□□ 0.84
CDK4-206ENST00000549606 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
CDK4-206ENST00000549606 ANP32CO43423 234 aa20.29■□□□□ 0.84
CDK4-206ENST00000549606 GMPSP49915 693 aaPredicted RBP20.29■□□□□ 0.84
CDK4-206ENST00000549606 CCDC27Q2M243 656 aa20.29■□□□□ 0.84
CDK4-206ENST00000549606 WASHC4Q2M389 1173 aa20.29■□□□□ 0.84
CDK4-206ENST00000549606 CCDC191Q8NCU4 936 aa20.29■□□□□ 0.84
CDK4-206ENST00000549606 METTL22Q9BUU2 404 aaPredicted RBP20.29■□□□□ 0.84
CDK4-206ENST00000549606 BCL2L13Q9BXK5 485 aa20.29■□□□□ 0.84
CDK4-206ENST00000549606 ADARB2Q9NS39 739 aaKnown RBP20.29■□□□□ 0.84
CDK4-206ENST00000549606 CWC25Q9NXE8 425 aaPredicted RBP20.29■□□□□ 0.84
CDK4-206ENST00000549606 C6orf229H3BNL8 230 aa20.28■□□□□ 0.84
CDK4-206ENST00000549606 RIMBP2O15034 1052 aa20.28■□□□□ 0.84
CDK4-206ENST00000549606 HSP90B1P14625 803 aaKnown RBP20.28■□□□□ 0.84
CDK4-206ENST00000549606 RPS8P62241 208 aaKnown RBP20.28■□□□□ 0.84
CDK4-206ENST00000549606 GPSM2P81274 684 aa20.28■□□□□ 0.84
CDK4-206ENST00000549606 TNIP1Q15025 636 aa20.28■□□□□ 0.84
CDK4-206ENST00000549606 STK31Q9BXU1 1019 aa20.28■□□□□ 0.84
CDK4-206ENST00000549606 MAP3K2Q9Y2U5 619 aa20.28■□□□□ 0.84
CDK4-206ENST00000549606 PCCAP05165 728 aaPredicted RBP20.27■□□□□ 0.84
CDK4-206ENST00000549606 SEC31BQ9NQW1 1179 aa20.27■□□□□ 0.84
CDK4-206ENST00000549606 YDJCA8MPS7 323 aa20.26■□□□□ 0.83
CDK4-206ENST00000549606 VEGFBP49765 207 aa20.26■□□□□ 0.83
CDK4-206ENST00000549606 FMR1Q06787 632 aaKnown RBP eCLIP20.26■□□□□ 0.832e-6■□□□□ 10.3
CDK4-206ENST00000549606 TWISTNBQ3B726 338 aaPredicted RBP20.26■□□□□ 0.83
CDK4-206ENST00000549606 CCDC85AQ96PX6 553 aaPredicted RBP20.26■□□□□ 0.83
CDK4-206ENST00000549606 DBNDD1Q9H9R9 158 aa20.26■□□□□ 0.83
CDK4-206ENST00000549606 POLLQ9UGP5 575 aa20.26■□□□□ 0.83
CDK4-206ENST00000549606 ABT1Q9ULW3 272 aaKnown RBP20.26■□□□□ 0.83
CDK4-206ENST00000549606 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
CDK4-206ENST00000549606 PI4KAP2A4QPH2 592 aa20.25■□□□□ 0.83
CDK4-206ENST00000549606 PDE8AO60658 829 aa20.25■□□□□ 0.83
CDK4-206ENST00000549606 DEFB115Q30KQ5 88 aa20.25■□□□□ 0.83
CDK4-206ENST00000549606 CCDC152Q4G0S7 254 aa20.25■□□□□ 0.83
CDK4-206ENST00000549606 KSR2Q6VAB6 950 aa20.25■□□□□ 0.83
CDK4-206ENST00000549606 PI4KAP1Q8N8J0 262 aa20.25■□□□□ 0.83
CDK4-206ENST00000549606 EYA3Q99504 573 aa20.24■□□□□ 0.83
CDK4-206ENST00000549606 TRAF5O00463 557 aa20.23■□□□□ 0.83
CDK4-206ENST00000549606 SLC4A2P04920 1241 aa20.23■□□□□ 0.83
CDK4-206ENST00000549606 NEXNQ0ZGT2 675 aa20.23■□□□□ 0.83
CDK4-206ENST00000549606 DOK7Q18PE1 504 aa20.23■□□□□ 0.83
CDK4-206ENST00000549606 TBC1D16Q8TBP0 767 aa20.23■□□□□ 0.83
CDK4-206ENST00000549606 GPR101Q96P66 508 aaPredicted RBP20.23■□□□□ 0.83
CDK4-206ENST00000549606 TRPM7Q96QT4 1865 aa20.23■□□□□ 0.83
CDK4-206ENST00000549606 CNOT7Q9UIV1 285 aaKnown RBP20.23■□□□□ 0.83
CDK4-206ENST00000549606 IL16Q14005 1332 aa20.23■□□□□ 0.83
CDK4-206ENST00000549606 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
CDK4-206ENST00000549606 RASSF10A6NK89 507 aa20.22■□□□□ 0.83
CDK4-206ENST00000549606 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
CDK4-206ENST00000549606 G2E3Q7L622 706 aa20.22■□□□□ 0.83
CDK4-206ENST00000549606 ANKIB1Q9P2G1 1089 aa20.22■□□□□ 0.83
CDK4-206ENST00000549606 ZBTB12Q9Y330 459 aaPredicted RBP20.22■□□□□ 0.83
CDK4-206ENST00000549606 SHTN1A0MZ66 631 aa20.21■□□□□ 0.83
CDK4-206ENST00000549606 H7C1D1 291 aa20.21■□□□□ 0.83
CDK4-206ENST00000549606 PSMD14O00487 310 aa20.21■□□□□ 0.83
CDK4-206ENST00000549606 ECE2O60344 883 aa20.21■□□□□ 0.83
CDK4-206ENST00000549606 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
CDK4-206ENST00000549606 NCBP3Q53F19 620 aaKnown RBP20.21■□□□□ 0.83
CDK4-206ENST00000549606 TNS4Q8IZW8 715 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms