RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
LINC00661-203ENST00000549131 APLP1P51693 650 aa18.85■□□□□ 0.61
LINC00661-203ENST00000549131 EXOSC9Q06265 439 aaKnown RBP18.85■□□□□ 0.61
LINC00661-203ENST00000549131 KSR2Q6VAB6 950 aa18.85■□□□□ 0.61
LINC00661-203ENST00000549131 PI4KAP1Q8N8J0 262 aa18.85■□□□□ 0.61
LINC00661-203ENST00000549131 ZBTB38Q8NAP3 1195 aaPredicted RBP18.85■□□□□ 0.61
LINC00661-203ENST00000549131 CCDC191Q8NCU4 936 aa18.85■□□□□ 0.61
LINC00661-203ENST00000549131 PPIP5K2O43314 1243 aa18.84■□□□□ 0.61
LINC00661-203ENST00000549131 DPP8Q6V1X1 898 aaPredicted RBP18.84■□□□□ 0.61
LINC00661-203ENST00000549131 G2E3Q7L622 706 aa18.84■□□□□ 0.61
LINC00661-203ENST00000549131 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
LINC00661-203ENST00000549131 IQCA1LA6NCM1 817 aa18.83■□□□□ 0.6
LINC00661-203ENST00000549131 FZD9O00144 591 aa18.83■□□□□ 0.6
LINC00661-203ENST00000549131 PCCAP05165 728 aaPredicted RBP18.83■□□□□ 0.6
LINC00661-203ENST00000549131 HSP90B1P14625 803 aaKnown RBP18.83■□□□□ 0.6
LINC00661-203ENST00000549131 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.6
LINC00661-203ENST00000549131 SF3B3Q15393 1217 aaKnown RBP18.83■□□□□ 0.6
LINC00661-203ENST00000549131 AOC3Q16853 763 aa18.83■□□□□ 0.6
LINC00661-203ENST00000549131 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
LINC00661-203ENST00000549131 SP8Q8IXZ3 490 aa18.83■□□□□ 0.6
LINC00661-203ENST00000549131 L3MBTL3Q96JM7 780 aaPredicted RBP18.83■□□□□ 0.6
LINC00661-203ENST00000549131 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.6
LINC00661-203ENST00000549131 EIF6P56537 245 aaKnown RBP18.82■□□□□ 0.6
LINC00661-203ENST00000549131 FLIIQ13045 1269 aa18.82■□□□□ 0.6
LINC00661-203ENST00000549131 FKBP5Q13451 457 aaPredicted RBP18.82■□□□□ 0.6
LINC00661-203ENST00000549131 NIM1KQ8IY84 436 aa18.82■□□□□ 0.6
LINC00661-203ENST00000549131 MPNDQ8N594 471 aa18.82■□□□□ 0.6
LINC00661-203ENST00000549131 SUPT20HQ8NEM7 779 aa18.82■□□□□ 0.6
LINC00661-203ENST00000549131 JARID2Q92833 1246 aaPredicted RBP18.82■□□□□ 0.6
LINC00661-203ENST00000549131 CELF1Q92879 486 aaKnown RBP18.82■□□□□ 0.6
LINC00661-203ENST00000549131 ADAMTSL1Q8N6G6 1762 aa18.82■□□□□ 0.6
LINC00661-203ENST00000549131 GPC2Q8N158 579 aa18.81■□□□□ 0.6
LINC00661-203ENST00000549131 GJA3Q9Y6H8 435 aa18.81■□□□□ 0.6
LINC00661-203ENST00000549131 VAMP4O75379 141 aa18.8■□□□□ 0.6
LINC00661-203ENST00000549131 IGKV5-2P06315 115 aa18.8■□□□□ 0.6
LINC00661-203ENST00000549131 CWF19L2Q2TBE0 894 aaKnown RBP18.8■□□□□ 0.6
LINC00661-203ENST00000549131 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
LINC00661-203ENST00000549131 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
LINC00661-203ENST00000549131 PDE8AO60658 829 aa18.79■□□□□ 0.6
LINC00661-203ENST00000549131 POTEIP0CG38 1075 aa18.79■□□□□ 0.6
LINC00661-203ENST00000549131 POTEJP0CG39 1038 aa18.79■□□□□ 0.6
LINC00661-203ENST00000549131 CCDC152Q4G0S7 254 aa18.79■□□□□ 0.6
LINC00661-203ENST00000549131 CCDC85AQ96PX6 553 aaPredicted RBP18.79■□□□□ 0.6
LINC00661-203ENST00000549131 RTFDC1Q9BY42 306 aaPredicted RBP18.79■□□□□ 0.6
LINC00661-203ENST00000549131 NEURL1BA8MQ27 555 aa18.78■□□□□ 0.6
LINC00661-203ENST00000549131 EAPPQ56P03 285 aaPredicted RBP18.78■□□□□ 0.6
LINC00661-203ENST00000549131 TAF1DQ9H5J8 278 aaPredicted RBP18.78■□□□□ 0.6
LINC00661-203ENST00000549131 ZNF521Q96K83 1311 aa18.77■□□□□ 0.6
LINC00661-203ENST00000549131 HTRA3P83110 453 aa18.77■□□□□ 0.6
LINC00661-203ENST00000549131 CHADLQ6NUI6 762 aa18.77■□□□□ 0.6
LINC00661-203ENST00000549131 DNAAF4Q8WXU2 420 aa18.77■□□□□ 0.6
LINC00661-203ENST00000549131 VPS33BQ9H267 617 aa18.77■□□□□ 0.6
LINC00661-203ENST00000549131 SEC31BQ9NQW1 1179 aa18.77■□□□□ 0.6
LINC00661-203ENST00000549131 LMOD1P29536 600 aaPredicted RBP18.76■□□□□ 0.59
LINC00661-203ENST00000549131 EPHX2P34913 555 aa18.76■□□□□ 0.59
LINC00661-203ENST00000549131 KIAA2012Q0VF49 1180 aa18.76■□□□□ 0.59
LINC00661-203ENST00000549131 NSFL1CQ9UNZ2 370 aaKnown RBP18.76■□□□□ 0.59
LINC00661-203ENST00000549131 CTSWP56202 376 aa18.75■□□□□ 0.59
LINC00661-203ENST00000549131 RPS8P62241 208 aaKnown RBP18.75■□□□□ 0.59
LINC00661-203ENST00000549131 UBE3BQ7Z3V4 1068 aa18.75■□□□□ 0.59
LINC00661-203ENST00000549131 LDHDQ86WU2 507 aa18.75■□□□□ 0.59
LINC00661-203ENST00000549131 ZNRF3Q9ULT6 936 aa18.75■□□□□ 0.59
LINC00661-203ENST00000549131 PSME4Q14997 1843 aa18.74■□□□□ 0.59
LINC00661-203ENST00000549131 C6orf229H3BNL8 230 aa18.74■□□□□ 0.59
LINC00661-203ENST00000549131 GPSM2P81274 684 aa18.74■□□□□ 0.59
LINC00661-203ENST00000549131 A0A1B0GUL6 1792 aa18.73■□□□□ 0.59
LINC00661-203ENST00000549131 GCKRQ14397 625 aa18.73■□□□□ 0.59
LINC00661-203ENST00000549131 PNMA8AQ86V59 439 aaPredicted RBP18.73■□□□□ 0.59
LINC00661-203ENST00000549131 LINS1Q8NG48 757 aa18.73■□□□□ 0.59
LINC00661-203ENST00000549131 CLEC11AQ9Y240 323 aa18.73■□□□□ 0.59
LINC00661-203ENST00000549131 SCN9AQ15858 1988 aa18.73■□□□□ 0.59
LINC00661-203ENST00000549131 SCNN1DP51172 638 aa18.72■□□□□ 0.59
LINC00661-203ENST00000549131 WASHC4Q2M389 1173 aa18.72■□□□□ 0.59
LINC00661-203ENST00000549131 ANKRD18AQ8IVF6 992 aa18.72■□□□□ 0.59
LINC00661-203ENST00000549131 ANKIB1Q9P2G1 1089 aa18.72■□□□□ 0.59
LINC00661-203ENST00000549131 F6X3S4 739 aa18.71■□□□□ 0.59
LINC00661-203ENST00000549131 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
LINC00661-203ENST00000549131 RIMBP2O15034 1052 aa18.71■□□□□ 0.59
LINC00661-203ENST00000549131 UFL1O94874 794 aa18.71■□□□□ 0.59
LINC00661-203ENST00000549131 CXCL9Q07325 125 aa18.71■□□□□ 0.59
LINC00661-203ENST00000549131 GPR101Q96P66 508 aaPredicted RBP18.71■□□□□ 0.59
LINC00661-203ENST00000549131 CDC5LQ99459 802 aaKnown RBP18.71■□□□□ 0.59
LINC00661-203ENST00000549131 EYA3Q99504 573 aa18.71■□□□□ 0.59
LINC00661-203ENST00000549131 POLLQ9UGP5 575 aa18.71■□□□□ 0.59
LINC00661-203ENST00000549131 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 E9PSI1 815 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 H7C1W4 665 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 RAD17O75943 681 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 EPS15P42566 896 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 CIAPIN1Q6FI81 312 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 TTLL11Q8NHH1 800 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 TBC1D16Q8TBP0 767 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 TRPM7Q96QT4 1865 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 GREM2Q9H772 168 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 DBNDD1Q9H9R9 158 aa18.7■□□□□ 0.58
LINC00661-203ENST00000549131 YDJCA8MPS7 323 aa18.69■□□□□ 0.58
LINC00661-203ENST00000549131 DNAJC5GQ8N7S2 189 aa18.69■□□□□ 0.58
LINC00661-203ENST00000549131 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
LINC00661-203ENST00000549131 GGA1Q9UJY5 639 aa18.69■□□□□ 0.58
LINC00661-203ENST00000549131 ECE2O60344 883 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms