RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 SCN4AP35499 1836 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 NUP98P52948 1817 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 H7C1D1 291 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 ANP32CO43423 234 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 ZNF853P0CG23 659 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 ECE1P42892 770 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 KIAA2012Q0VF49 1180 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 CCDC27Q2M243 656 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 WASHC4Q2M389 1173 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 DEFB115Q30KQ5 88 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
GCN1-205ENST00000548821 ZBTB38Q8NAP3 1195 aaPredicted RBP12.4□□□□□ -0.42
GCN1-205ENST00000548821 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
GCN1-205ENST00000548821 CCDC88AQ3V6T2 1871 aa12.4□□□□□ -0.42
GCN1-205ENST00000548821 PASKQ96RG2 1323 aa12.39□□□□□ -0.43
GCN1-205ENST00000548821 IRS4O14654 1257 aaPredicted RBP12.39□□□□□ -0.43
GCN1-205ENST00000548821 ITGBL1O95965 494 aaPredicted RBP12.39□□□□□ -0.43
GCN1-205ENST00000548821 RPS8P62241 208 aaKnown RBP12.39□□□□□ -0.43
GCN1-205ENST00000548821 MAP2K1Q02750 393 aaPredicted RBP12.39□□□□□ -0.43
GCN1-205ENST00000548821 AOC3Q16853 763 aa12.39□□□□□ -0.43
GCN1-205ENST00000548821 FAM89AQ96GI7 184 aa12.39□□□□□ -0.43
GCN1-205ENST00000548821 BEGAINQ9BUH8 593 aa12.39□□□□□ -0.43
GCN1-205ENST00000548821 NSFL1CQ9UNZ2 370 aaKnown RBP12.39□□□□□ -0.43
GCN1-205ENST00000548821 C6orf229H3BNL8 230 aa12.38□□□□□ -0.43
GCN1-205ENST00000548821 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
GCN1-205ENST00000548821 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
GCN1-205ENST00000548821 ZC3H12CQ9C0D7 883 aaKnown RBP12.38□□□□□ -0.43
GCN1-205ENST00000548821 CWC25Q9NXE8 425 aaPredicted RBP12.38□□□□□ -0.43
GCN1-205ENST00000548821 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
GCN1-205ENST00000548821 MKRN1Q9UHC7 482 aaKnown RBP12.38□□□□□ -0.43
GCN1-205ENST00000548821 ABT1Q9ULW3 272 aaKnown RBP12.38□□□□□ -0.43
GCN1-205ENST00000548821 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
GCN1-205ENST00000548821 PDE8AO60658 829 aa12.37□□□□□ -0.43
GCN1-205ENST00000548821 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
GCN1-205ENST00000548821 CXCL9Q07325 125 aa12.37□□□□□ -0.43
GCN1-205ENST00000548821 KRT24Q2M2I5 525 aa12.37□□□□□ -0.43
GCN1-205ENST00000548821 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
GCN1-205ENST00000548821 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
GCN1-205ENST00000548821 DPF2Q92785 391 aa12.37□□□□□ -0.43
GCN1-205ENST00000548821 CNTNAP1P78357 1384 aa12.37□□□□□ -0.43
GCN1-205ENST00000548821 IL16Q14005 1332 aa12.37□□□□□ -0.43
GCN1-205ENST00000548821 ELL2O00472 640 aaPredicted RBP12.36□□□□□ -0.43
GCN1-205ENST00000548821 PCCAP05165 728 aaPredicted RBP12.36□□□□□ -0.43
GCN1-205ENST00000548821 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
GCN1-205ENST00000548821 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
GCN1-205ENST00000548821 SCNN1DP51172 638 aa12.36□□□□□ -0.43
GCN1-205ENST00000548821 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
GCN1-205ENST00000548821 CDC5LQ99459 802 aaKnown RBP12.36□□□□□ -0.43
GCN1-205ENST00000548821 METTL22Q9BUU2 404 aaPredicted RBP12.36□□□□□ -0.43
GCN1-205ENST00000548821 ANKIB1Q9P2G1 1089 aa12.36□□□□□ -0.43
GCN1-205ENST00000548821 RASSF10A6NK89 507 aa12.35□□□□□ -0.43
GCN1-205ENST00000548821 EPS15P42566 896 aa12.35□□□□□ -0.43
GCN1-205ENST00000548821 CTCFP49711 727 aaPredicted RBP12.35□□□□□ -0.43
GCN1-205ENST00000548821 KSR2Q6VAB6 950 aa12.35□□□□□ -0.43
GCN1-205ENST00000548821 CDC37L1Q7L3B6 337 aa12.35□□□□□ -0.43
GCN1-205ENST00000548821 MYD88Q99836 296 aa12.35□□□□□ -0.43
GCN1-205ENST00000548821 SNED1Q8TER0 1413 aa12.35□□□□□ -0.43
GCN1-205ENST00000548821 CACNA1SQ13698 1873 aa12.34□□□□□ -0.43
GCN1-205ENST00000548821 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
GCN1-205ENST00000548821 MMP14P50281 582 aa12.34□□□□□ -0.43
GCN1-205ENST00000548821 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
GCN1-205ENST00000548821 MYH16Q9H6N6 1097 aa12.34□□□□□ -0.43
GCN1-205ENST00000548821 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
GCN1-205ENST00000548821 PODXL2Q9NZ53 605 aa12.34□□□□□ -0.43
GCN1-205ENST00000548821 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
GCN1-205ENST00000548821 GGA1Q9UJY5 639 aa12.34□□□□□ -0.43
GCN1-205ENST00000548821 RAD17O75943 681 aa12.33□□□□□ -0.44
GCN1-205ENST00000548821 VEGFBP49765 207 aa12.33□□□□□ -0.44
GCN1-205ENST00000548821 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
GCN1-205ENST00000548821 RTL5Q5HYW3 569 aaPredicted RBP12.33□□□□□ -0.44
GCN1-205ENST00000548821 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
GCN1-205ENST00000548821 WDR63Q8IWG1 891 aa12.33□□□□□ -0.44
GCN1-205ENST00000548821 HHIPL1Q96JK4 782 aa12.33□□□□□ -0.44
GCN1-205ENST00000548821 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
GCN1-205ENST00000548821 MRS2Q9HD23 443 aa12.33□□□□□ -0.44
GCN1-205ENST00000548821 PGAP2Q9UHJ9 254 aa12.33□□□□□ -0.44
GCN1-205ENST00000548821 ZNF316A6NFI3 1004 aaPredicted RBP12.32□□□□□ -0.44
GCN1-205ENST00000548821 CA12O43570 354 aa12.32□□□□□ -0.44
GCN1-205ENST00000548821 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
GCN1-205ENST00000548821 ATP2B4P23634 1241 aa12.32□□□□□ -0.44
GCN1-205ENST00000548821 MAP2K2P36507 400 aa12.32□□□□□ -0.44
GCN1-205ENST00000548821 COL13A1Q5TAT6 717 aaPredicted RBP12.32□□□□□ -0.44
GCN1-205ENST00000548821 WWC1Q8IX03 1113 aa12.32□□□□□ -0.44
GCN1-205ENST00000548821 C8orf58Q8NAV2 365 aa12.32□□□□□ -0.44
GCN1-205ENST00000548821 CELF1Q92879 486 aaKnown RBP12.32□□□□□ -0.44
GCN1-205ENST00000548821 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
GCN1-205ENST00000548821 MAP3K2Q9Y2U5 619 aa12.32□□□□□ -0.44
GCN1-205ENST00000548821 WDR33Q9C0J8 1336 aaKnown RBP12.32□□□□□ -0.44
GCN1-205ENST00000548821 PI4KAP2A4QPH2 592 aa12.31□□□□□ -0.44
GCN1-205ENST00000548821 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
GCN1-205ENST00000548821 PODNQ7Z5L7 613 aa12.31□□□□□ -0.44
GCN1-205ENST00000548821 PI4KAP1Q8N8J0 262 aa12.31□□□□□ -0.44
GCN1-205ENST00000548821 TBC1D16Q8TBP0 767 aa12.31□□□□□ -0.44
GCN1-205ENST00000548821 XDHP47989 1333 aa12.31□□□□□ -0.44
GCN1-205ENST00000548821 ECE2O60344 883 aa12.3□□□□□ -0.44
GCN1-205ENST00000548821 UFL1O94874 794 aa12.3□□□□□ -0.44
GCN1-205ENST00000548821 CELF2O95319 508 aaKnown RBP12.3□□□□□ -0.44
GCN1-205ENST00000548821 IGHMBP2P38935 993 aaKnown RBP12.3□□□□□ -0.44
GCN1-205ENST00000548821 GPSM2P81274 684 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms