RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 TRIM28Q13263 835 aaKnown RBP27.7■■■□□ 2.02
USP44-204ENST00000547951 RTFDC1Q9BY42 306 aaPredicted RBP27.7■■■□□ 2.02
USP44-204ENST00000547951 DPP8Q6V1X1 898 aaPredicted RBP27.69■■■□□ 2.02
USP44-204ENST00000547951 NIM1KQ8IY84 436 aa27.69■■■□□ 2.02
USP44-204ENST00000547951 JARID2Q92833 1246 aaPredicted RBP27.69■■■□□ 2.02
USP44-204ENST00000547951 CELF1Q92879 486 aaKnown RBP27.69■■■□□ 2.02
USP44-204ENST00000547951 MYD88Q99836 296 aa27.69■■■□□ 2.02
USP44-204ENST00000547951 CCDC27Q2M243 656 aa27.68■■■□□ 2.02
USP44-204ENST00000547951 MPNDQ8N594 471 aa27.68■■■□□ 2.02
USP44-204ENST00000547951 TMX4Q9H1E5 349 aaPredicted RBP27.68■■■□□ 2.02
USP44-204ENST00000547951 PASKQ96RG2 1323 aa27.67■■■□□ 2.02
USP44-204ENST00000547951 IRS4O14654 1257 aaPredicted RBP27.67■■■□□ 2.02
USP44-204ENST00000547951 SCNN1DP51172 638 aa27.67■■■□□ 2.02
USP44-204ENST00000547951 SF3B3Q15393 1217 aaKnown RBP27.67■■■□□ 2.02
USP44-204ENST00000547951 CLEC11AQ9Y240 323 aa27.67■■■□□ 2.02
USP44-204ENST00000547951 ANP32CO43423 234 aa27.66■■■□□ 2.02
USP44-204ENST00000547951 ITGBL1O95965 494 aaPredicted RBP27.66■■■□□ 2.02
USP44-204ENST00000547951 EPS15P42566 896 aa27.66■■■□□ 2.02
USP44-204ENST00000547951 CCDC30Q5VVM6 783 aa27.66■■■□□ 2.02
USP44-204ENST00000547951 SALL2Q9Y467 1007 aaPredicted RBP27.65■■■□□ 2.02
USP44-204ENST00000547951 MAP1SQ66K74 1059 aaPredicted RBP27.64■■■□□ 2.02
USP44-204ENST00000547951 CXCL9Q07325 125 aa27.63■■■□□ 2.01
USP44-204ENST00000547951 ZBTB38Q8NAP3 1195 aaPredicted RBP27.63■■■□□ 2.01
USP44-204ENST00000547951 SUPT20HQ8NEM7 779 aa27.63■■■□□ 2.01
USP44-204ENST00000547951 METTL22Q9BUU2 404 aaPredicted RBP27.63■■■□□ 2.01
USP44-204ENST00000547951 ZNRF3Q9ULT6 936 aa27.63■■■□□ 2.01
USP44-204ENST00000547951 KIAA2012Q0VF49 1180 aa27.62■■■□□ 2.01
USP44-204ENST00000547951 G2E3Q7L622 706 aa27.62■■■□□ 2.01
USP44-204ENST00000547951 PNMA8AQ86V59 439 aaPredicted RBP27.62■■■□□ 2.01
USP44-204ENST00000547951 CREBZFQ9NS37 354 aa27.62■■■□□ 2.01
USP44-204ENST00000547951 MKRN1Q9UHC7 482 aaKnown RBP27.62■■■□□ 2.01
USP44-204ENST00000547951 MAP3K2Q9Y2U5 619 aa27.62■■■□□ 2.01
USP44-204ENST00000547951 VPS33BQ9H267 617 aa27.61■■■□□ 2.01
USP44-204ENST00000547951 SEC31BQ9NQW1 1179 aa27.61■■■□□ 2.01
USP44-204ENST00000547951 LMOD1P29536 600 aaPredicted RBP27.6■■■□□ 2.01
USP44-204ENST00000547951 GPSM2P81274 684 aa27.6■■■□□ 2.01
USP44-204ENST00000547951 TWISTNBQ3B726 338 aaPredicted RBP27.6■■■□□ 2.01
USP44-204ENST00000547951 CCDC191Q8NCU4 936 aa27.6■■■□□ 2.01
USP44-204ENST00000547951 CWC25Q9NXE8 425 aaPredicted RBP27.6■■■□□ 2.01
USP44-204ENST00000547951 PI4KAP2A4QPH2 592 aa27.59■■■□□ 2.01
USP44-204ENST00000547951 YDJCA8MPS7 323 aa27.59■■■□□ 2.01
USP44-204ENST00000547951 RAD17O75943 681 aa27.59■■■□□ 2.01
USP44-204ENST00000547951 PCCAP05165 728 aaPredicted RBP27.59■■■□□ 2.01
USP44-204ENST00000547951 TMC4Q7Z404 712 aa27.59■■■□□ 2.01
USP44-204ENST00000547951 CNTROBQ8N137 903 aa27.59■■■□□ 2.01
USP44-204ENST00000547951 PI4KAP1Q8N8J0 262 aa27.59■■■□□ 2.01
USP44-204ENST00000547951 GPR101Q96P66 508 aaPredicted RBP27.59■■■□□ 2.01
USP44-204ENST00000547951 CCDC85AQ96PX6 553 aaPredicted RBP27.59■■■□□ 2.01
USP44-204ENST00000547951 IL16Q14005 1332 aa27.59■■■□□ 2.01
USP44-204ENST00000547951 FANCIQ9NVI1 1328 aa27.59■■■□□ 2.01
USP44-204ENST00000547951 IGKV5-2P06315 115 aa27.58■■■□□ 2.01
USP44-204ENST00000547951 FMR1Q06787 632 aaKnown RBP eCLIP27.58■■■□□ 2.01
USP44-204ENST00000547951 NSFL1CQ9UNZ2 370 aaKnown RBP27.58■■■□□ 2.01
USP44-204ENST00000547951 DDX58O95786 925 aaKnown RBP27.57■■■□□ 2
USP44-204ENST00000547951 GMPSP49915 693 aaPredicted RBP27.57■■■□□ 2
USP44-204ENST00000547951 IFFO2Q5TF58 517 aa27.57■■■□□ 2
USP44-204ENST00000547951 KSR2Q6VAB6 950 aa27.57■■■□□ 2
USP44-204ENST00000547951 POLLQ9UGP5 575 aa27.57■■■□□ 2
USP44-204ENST00000547951 RPS8P62241 208 aaKnown RBP27.56■■■□□ 2
USP44-204ENST00000547951 GPRC5DQ9NZD1 345 aa27.56■■■□□ 2
USP44-204ENST00000547951 RIMBP2O15034 1052 aa27.55■■■□□ 2
USP44-204ENST00000547951 STK31Q9BXU1 1019 aa27.55■■■□□ 2
USP44-204ENST00000547951 SPINK5Q9NQ38 1064 aaPredicted RBP27.55■■■□□ 2
USP44-204ENST00000547951 SHTN1A0MZ66 631 aa27.54■■■□□ 2
USP44-204ENST00000547951 SLC4A2P04920 1241 aa27.54■■■□□ 2
USP44-204ENST00000547951 CWF19L2Q2TBE0 894 aaKnown RBP27.54■■■□□ 2
USP44-204ENST00000547951 NCBP3Q53F19 620 aaKnown RBP27.54■■■□□ 2
USP44-204ENST00000547951 CIAPIN1Q6FI81 312 aa27.54■■■□□ 2
USP44-204ENST00000547951 CNTNAP1P78357 1384 aa27.53■■■□□ 2
USP44-204ENST00000547951 TMEM88BA6NKF7 163 aa27.53■■■□□ 2
USP44-204ENST00000547951 C6orf229H3BNL8 230 aa27.53■■■□□ 2
USP44-204ENST00000547951 PDE8AO60658 829 aa27.53■■■□□ 2
USP44-204ENST00000547951 WASHC4Q2M389 1173 aa27.53■■■□□ 2
USP44-204ENST00000547951 CHMP4AQ9BY43 222 aa27.53■■■□□ 2
USP44-204ENST00000547951 DBNDD1Q9H9R9 158 aa27.53■■■□□ 2
USP44-204ENST00000547951 KCNQ5Q9NR82 932 aa27.52■■■□□ 2
USP44-204ENST00000547951 HSPA1AP0DMV8 641 aaKnown RBP27.51■■□□□ 1.99
USP44-204ENST00000547951 HSPA1BP0DMV9 641 aaKnown RBP27.51■■□□□ 1.99
USP44-204ENST00000547951 CCDC152Q4G0S7 254 aa27.51■■□□□ 1.99
USP44-204ENST00000547951 USP50Q70EL3 339 aaPredicted RBP27.51■■□□□ 1.99
USP44-204ENST00000547951 FAM9BQ8IZU0 186 aa27.51■■□□□ 1.99
USP44-204ENST00000547951 TBC1D16Q8TBP0 767 aa27.51■■□□□ 1.99
USP44-204ENST00000547951 ADARB2Q9NS39 739 aaKnown RBP27.51■■□□□ 1.99
USP44-204ENST00000547951 SPEF2Q9C093 1822 aa27.51■■□□□ 1.99
USP44-204ENST00000547951 CDHR2Q9BYE9 1310 aa27.5■■□□□ 1.99
USP44-204ENST00000547951 MYH3P11055 1940 aa27.5■■□□□ 1.99
USP44-204ENST00000547951 TRAF5O00463 557 aa27.5■■□□□ 1.99
USP44-204ENST00000547951 EXOSC9Q06265 439 aaKnown RBP27.5■■□□□ 1.99
USP44-204ENST00000547951 DOK7Q18PE1 504 aa27.5■■□□□ 1.99
USP44-204ENST00000547951 COL13A1Q5TAT6 717 aaPredicted RBP27.5■■□□□ 1.99
USP44-204ENST00000547951 WDR63Q8IWG1 891 aa27.5■■□□□ 1.99
USP44-204ENST00000547951 SCN9AQ15858 1988 aa27.49■■□□□ 1.99
USP44-204ENST00000547951 NEURL1BA8MQ27 555 aa27.49■■□□□ 1.99
USP44-204ENST00000547951 VAMP4O75379 141 aa27.49■■□□□ 1.99
USP44-204ENST00000547951 FLIIQ13045 1269 aa27.49■■□□□ 1.99
USP44-204ENST00000547951 ZBTB12Q9Y330 459 aaPredicted RBP27.49■■□□□ 1.99
USP44-204ENST00000547951 HIRAP54198 1017 aaPredicted RBP27.48■■□□□ 1.99
USP44-204ENST00000547951 TNIP1Q15025 636 aa27.48■■□□□ 1.99
USP44-204ENST00000547951 TRPM4Q8TD43 1214 aa27.48■■□□□ 1.99
USP44-204ENST00000547951 BCL2L13Q9BXK5 485 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms