RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ATP6V0A2Q9Y487 856 aa23.82■■□□□ 1.4
PRPF40B-206ENST00000547764 CCDC88AQ3V6T2 1871 aa23.81■■□□□ 1.4
PRPF40B-206ENST00000547764 UBE3BQ7Z3V4 1068 aa23.81■■□□□ 1.4
PRPF40B-206ENST00000547764 SMC4Q9NTJ3 1288 aa23.81■■□□□ 1.4
PRPF40B-206ENST00000547764 SNED1Q8TER0 1413 aa23.81■■□□□ 1.4
PRPF40B-206ENST00000547764 TAF1P21675 1872 aa23.8■■□□□ 1.4
PRPF40B-206ENST00000547764 SLC4A10Q6U841 1118 aa23.8■■□□□ 1.4
PRPF40B-206ENST00000547764 PTPRCP08575 1304 aa23.8■■□□□ 1.4
PRPF40B-206ENST00000547764 CASP7P55210 303 aa23.79■■□□□ 1.4
PRPF40B-206ENST00000547764 GRIPAP1Q4V328 841 aa23.79■■□□□ 1.4
PRPF40B-206ENST00000547764 SP8Q8IXZ3 490 aa23.79■■□□□ 1.4
PRPF40B-206ENST00000547764 CELF1Q92879 486 aaKnown RBP23.79■■□□□ 1.4
PRPF40B-206ENST00000547764 GPBP1L1Q9HC44 474 aaPredicted RBP23.79■■□□□ 1.4
PRPF40B-206ENST00000547764 ZBED9Q6R2W3 1325 aa23.79■■□□□ 1.4
PRPF40B-206ENST00000547764 CCDC152Q4G0S7 254 aa23.78■■□□□ 1.4
PRPF40B-206ENST00000547764 CCDC85AQ96PX6 553 aaPredicted RBP23.78■■□□□ 1.4
PRPF40B-206ENST00000547764 PSMD1Q99460 953 aa23.78■■□□□ 1.4
PRPF40B-206ENST00000547764 TMX4Q9H1E5 349 aaPredicted RBP23.78■■□□□ 1.4
PRPF40B-206ENST00000547764 ZNF277Q9NRM2 450 aaPredicted RBP23.78■■□□□ 1.4
PRPF40B-206ENST00000547764 ZC3H4Q9UPT8 1303 aaKnown RBP23.78■■□□□ 1.4
PRPF40B-206ENST00000547764 CTSWP56202 376 aa23.77■■□□□ 1.4
PRPF40B-206ENST00000547764 SEC31BQ9NQW1 1179 aa23.77■■□□□ 1.4
PRPF40B-206ENST00000547764 ALDH1L1O75891 902 aa23.76■■□□□ 1.39
PRPF40B-206ENST00000547764 RARSP54136 660 aaKnown RBP23.76■■□□□ 1.39
PRPF40B-206ENST00000547764 TMC4Q7Z404 712 aa23.76■■□□□ 1.39
PRPF40B-206ENST00000547764 TTLL11Q8NHH1 800 aa23.76■■□□□ 1.39
PRPF40B-206ENST00000547764 SRCIN1Q9C0H9 1055 aa23.76■■□□□ 1.39
PRPF40B-206ENST00000547764 COL4A1P02462 1669 aa23.76■■□□□ 1.39
PRPF40B-206ENST00000547764 RPS8P62241 208 aaKnown RBP23.75■■□□□ 1.39
PRPF40B-206ENST00000547764 PLA2G12BQ9BX93 195 aa23.75■■□□□ 1.39
PRPF40B-206ENST00000547764 DICER1Q9UPY3 1922 aaKnown RBP23.74■■□□□ 1.39
PRPF40B-206ENST00000547764 IARSP41252 1262 aaKnown RBP23.74■■□□□ 1.39
PRPF40B-206ENST00000547764 BRPF1P55201 1214 aaPredicted RBP23.74■■□□□ 1.39
PRPF40B-206ENST00000547764 TIAM2Q8IVF5 1701 aa23.73■■□□□ 1.39
PRPF40B-206ENST00000547764 NOB1Q9ULX3 412 aaKnown RBP23.73■■□□□ 1.39
PRPF40B-206ENST00000547764 GRM8O00222 908 aa23.72■■□□□ 1.39
PRPF40B-206ENST00000547764 DPP8Q6V1X1 898 aaPredicted RBP23.72■■□□□ 1.39
PRPF40B-206ENST00000547764 MPNDQ8N594 471 aa23.72■■□□□ 1.39
PRPF40B-206ENST00000547764 GREM2Q9H772 168 aa23.72■■□□□ 1.39
PRPF40B-206ENST00000547764 C9orf78Q9NZ63 289 aaPredicted RBP23.72■■□□□ 1.39
PRPF40B-206ENST00000547764 MYH3P11055 1940 aa23.71■■□□□ 1.39
PRPF40B-206ENST00000547764 KDM2BQ8NHM5 1336 aa23.71■■□□□ 1.39
PRPF40B-206ENST00000547764 RTFDC1Q9BY42 306 aaPredicted RBP23.71■■□□□ 1.39
PRPF40B-206ENST00000547764 GLTPD2A6NH11 291 aa23.7■■□□□ 1.38
PRPF40B-206ENST00000547764 CSF1RP07333 972 aa23.7■■□□□ 1.38
PRPF40B-206ENST00000547764 NMRK2Q9NPI5 230 aa23.7■■□□□ 1.38
PRPF40B-206ENST00000547764 RTL9Q8NET4 1388 aa23.69■■□□□ 1.38
PRPF40B-206ENST00000547764 ANKRD18AQ8IVF6 992 aa23.69■■□□□ 1.38
PRPF40B-206ENST00000547764 SUPT20HQ8NEM7 779 aa23.69■■□□□ 1.38
PRPF40B-206ENST00000547764 CDC5LQ99459 802 aaKnown RBP23.69■■□□□ 1.38
PRPF40B-206ENST00000547764 LRRC37AA6NMS7 1700 aa23.69■■□□□ 1.38
PRPF40B-206ENST00000547764 FOXO4P98177 505 aa23.68■■□□□ 1.38
PRPF40B-206ENST00000547764 DPY19L2Q6NUT2 758 aa23.68■■□□□ 1.38
PRPF40B-206ENST00000547764 NSFL1CQ9UNZ2 370 aaKnown RBP23.68■■□□□ 1.38
PRPF40B-206ENST00000547764 KIF3CO14782 793 aa23.67■■□□□ 1.38
PRPF40B-206ENST00000547764 NBPF7P0C2Y1 421 aaPredicted RBP23.67■■□□□ 1.38
PRPF40B-206ENST00000547764 GPSM2P81274 684 aa23.67■■□□□ 1.38
PRPF40B-206ENST00000547764 FAM161AQ3B820 660 aa23.67■■□□□ 1.38
PRPF40B-206ENST00000547764 LARGE2Q8N3Y3 721 aa23.67■■□□□ 1.38
PRPF40B-206ENST00000547764 JDP2Q8WYK2 163 aa23.67■■□□□ 1.38
PRPF40B-206ENST00000547764 API5Q9BZZ5 524 aaKnown RBP23.67■■□□□ 1.38
PRPF40B-206ENST00000547764 VPS33BQ9H267 617 aa23.67■■□□□ 1.38
PRPF40B-206ENST00000547764 UTYO14607 1347 aa23.66■■□□□ 1.38
PRPF40B-206ENST00000547764 KIF16BQ96L93 1317 aa23.66■■□□□ 1.38
PRPF40B-206ENST00000547764 PPIP5K2O43314 1243 aa23.66■■□□□ 1.38
PRPF40B-206ENST00000547764 BCAR3O75815 825 aa23.66■■□□□ 1.38
PRPF40B-206ENST00000547764 ITGA6P23229 1130 aa23.66■■□□□ 1.38
PRPF40B-206ENST00000547764 AOC3Q16853 763 aa23.66■■□□□ 1.38
PRPF40B-206ENST00000547764 EPHA10Q5JZY3 1008 aa23.66■■□□□ 1.38
PRPF40B-206ENST00000547764 COL4A5P29400 1685 aa23.66■■□□□ 1.38
PRPF40B-206ENST00000547764 FZD9O00144 591 aa23.65■■□□□ 1.38
PRPF40B-206ENST00000547764 ARHGAP45Q92619 1136 aa23.65■■□□□ 1.38
PRPF40B-206ENST00000547764 RRAGCQ9HB90 399 aa23.65■■□□□ 1.38
PRPF40B-206ENST00000547764 DDNO94850 711 aaPredicted RBP23.64■■□□□ 1.37
PRPF40B-206ENST00000547764 LMBR1LQ6UX01 489 aa23.64■■□□□ 1.37
PRPF40B-206ENST00000547764 SUCLG2Q96I99 432 aa23.64■■□□□ 1.37
PRPF40B-206ENST00000547764 BSDC1Q9NW68 430 aaPredicted RBP23.64■■□□□ 1.37
PRPF40B-206ENST00000547764 POLLQ9UGP5 575 aa23.64■■□□□ 1.37
PRPF40B-206ENST00000547764 DUOX1Q9NRD9 1551 aa23.64■■□□□ 1.37
PRPF40B-206ENST00000547764 ZNF541Q9H0D2 1346 aa23.63■■□□□ 1.37
PRPF40B-206ENST00000547764 CCT4P50991 539 aaKnown RBP23.63■■□□□ 1.37
PRPF40B-206ENST00000547764 KIAA2012Q0VF49 1180 aa23.63■■□□□ 1.37
PRPF40B-206ENST00000547764 KAZALD1Q96I82 304 aa23.63■■□□□ 1.37
PRPF40B-206ENST00000547764 USP44Q9H0E7 712 aa23.63■■□□□ 1.37
PRPF40B-206ENST00000547764 PODXL2Q9NZ53 605 aa23.63■■□□□ 1.37
PRPF40B-206ENST00000547764 C6orf229H3BNL8 230 aa23.62■■□□□ 1.37
PRPF40B-206ENST00000547764 IGHMBP2P38935 993 aaKnown RBP23.62■■□□□ 1.37
PRPF40B-206ENST00000547764 NIM1KQ8IY84 436 aa23.62■■□□□ 1.37
PRPF40B-206ENST00000547764 ANKIB1Q9P2G1 1089 aa23.62■■□□□ 1.37
PRPF40B-206ENST00000547764 CHMP3Q9Y3E7 222 aa23.62■■□□□ 1.37
PRPF40B-206ENST00000547764 ANKRD18BA2A2Z9 1011 aa23.61■■□□□ 1.37
PRPF40B-206ENST00000547764 IPO8O15397 1037 aaKnown RBP23.61■■□□□ 1.37
PRPF40B-206ENST00000547764 IFIT5Q13325 482 aaKnown RBP23.61■■□□□ 1.37
PRPF40B-206ENST00000547764 TBC1D16Q8TBP0 767 aa23.61■■□□□ 1.37
PRPF40B-206ENST00000547764 FRAT1Q92837 279 aaPredicted RBP23.61■■□□□ 1.37
PRPF40B-206ENST00000547764 MINPP1Q9UNW1 487 aa23.61■■□□□ 1.37
PRPF40B-206ENST00000547764 LTBP1Q14766 1721 aa23.61■■□□□ 1.37
PRPF40B-206ENST00000547764 POTECB2RU33 542 aa23.6■■□□□ 1.37
PRPF40B-206ENST00000547764 WASHC4Q2M389 1173 aa23.6■■□□□ 1.37
PRPF40B-206ENST00000547764 VEGFAP15692 232 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms