RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 BCL2L13Q9BXK5 485 aa30.6■■■□□ 2.49
RBFOX1-209ENST00000547427 CDHR2Q9BYE9 1310 aa30.6■■■□□ 2.49
RBFOX1-209ENST00000547427 ALDH1L2Q3SY69 923 aa30.59■■■□□ 2.49
RBFOX1-209ENST00000547427 GRIPAP1Q4V328 841 aa30.59■■■□□ 2.49
RBFOX1-209ENST00000547427 SLC4A10Q6U841 1118 aa30.59■■■□□ 2.49
RBFOX1-209ENST00000547427 UBE3BQ7Z3V4 1068 aa30.59■■■□□ 2.49
RBFOX1-209ENST00000547427 MYH3P11055 1940 aa30.59■■■□□ 2.49
RBFOX1-209ENST00000547427 ZC3H4Q9UPT8 1303 aaKnown RBP30.58■■■□□ 2.49
RBFOX1-209ENST00000547427 CCDC152Q4G0S7 254 aa30.58■■■□□ 2.49
RBFOX1-209ENST00000547427 SMC4Q9NTJ3 1288 aa30.58■■■□□ 2.49
RBFOX1-209ENST00000547427 ATP6V0A2Q9Y487 856 aa30.58■■■□□ 2.49
RBFOX1-209ENST00000547427 ZNF277Q9NRM2 450 aaPredicted RBP30.57■■■□□ 2.48
RBFOX1-209ENST00000547427 BEND3Q5T5X7 828 aa30.56■■■□□ 2.48
RBFOX1-209ENST00000547427 PTPRCP08575 1304 aa30.55■■■□□ 2.48
RBFOX1-209ENST00000547427 H7C1W4 665 aa30.55■■■□□ 2.48
RBFOX1-209ENST00000547427 TMC4Q7Z404 712 aa30.55■■■□□ 2.48
RBFOX1-209ENST00000547427 SP8Q8IXZ3 490 aa30.55■■■□□ 2.48
RBFOX1-209ENST00000547427 CCDC85AQ96PX6 553 aaPredicted RBP30.55■■■□□ 2.48
RBFOX1-209ENST00000547427 PSMD1Q99460 953 aa30.55■■■□□ 2.48
RBFOX1-209ENST00000547427 KDM2BQ8NHM5 1336 aa30.54■■■□□ 2.48
RBFOX1-209ENST00000547427 SLC51AQ86UW1 340 aa30.53■■■□□ 2.48
RBFOX1-209ENST00000547427 CELF1Q92879 486 aaKnown RBP30.53■■■□□ 2.48
RBFOX1-209ENST00000547427 IARSP41252 1262 aaKnown RBP30.52■■■□□ 2.48
RBFOX1-209ENST00000547427 CTSWP56202 376 aa30.52■■■□□ 2.48
RBFOX1-209ENST00000547427 SRCIN1Q9C0H9 1055 aa30.52■■■□□ 2.48
RBFOX1-209ENST00000547427 SNED1Q8TER0 1413 aa30.51■■■□□ 2.47
RBFOX1-209ENST00000547427 RPS8P62241 208 aaKnown RBP30.51■■■□□ 2.47
RBFOX1-209ENST00000547427 DPY19L2Q6NUT2 758 aa30.51■■■□□ 2.47
RBFOX1-209ENST00000547427 SEC31BQ9NQW1 1179 aa30.51■■■□□ 2.47
RBFOX1-209ENST00000547427 DPP8Q6V1X1 898 aaPredicted RBP30.5■■■□□ 2.47
RBFOX1-209ENST00000547427 MPNDQ8N594 471 aa30.5■■■□□ 2.47
RBFOX1-209ENST00000547427 ALDH1L1O75891 902 aa30.49■■■□□ 2.47
RBFOX1-209ENST00000547427 C9orf78Q9NZ63 289 aaPredicted RBP30.49■■■□□ 2.47
RBFOX1-209ENST00000547427 ZBED9Q6R2W3 1325 aa30.48■■■□□ 2.47
RBFOX1-209ENST00000547427 GLTPD2A6NH11 291 aa30.48■■■□□ 2.47
RBFOX1-209ENST00000547427 SUPT20HQ8NEM7 779 aa30.48■■■□□ 2.47
RBFOX1-209ENST00000547427 TTLL11Q8NHH1 800 aa30.48■■■□□ 2.47
RBFOX1-209ENST00000547427 JDP2Q8WYK2 163 aa30.48■■■□□ 2.47
RBFOX1-209ENST00000547427 NMRK2Q9NPI5 230 aa30.47■■■□□ 2.47
RBFOX1-209ENST00000547427 LRRC37AA6NMS7 1700 aa30.47■■■□□ 2.47
RBFOX1-209ENST00000547427 GRM8O00222 908 aa30.46■■■□□ 2.47
RBFOX1-209ENST00000547427 CASP7P55210 303 aa30.46■■■□□ 2.47
RBFOX1-209ENST00000547427 ANKRD18AQ8IVF6 992 aa30.46■■■□□ 2.47
RBFOX1-209ENST00000547427 LARGE2Q8N3Y3 721 aa30.46■■■□□ 2.47
RBFOX1-209ENST00000547427 CDC5LQ99459 802 aaKnown RBP30.46■■■□□ 2.47
RBFOX1-209ENST00000547427 PLA2G12BQ9BX93 195 aa30.46■■■□□ 2.47
RBFOX1-209ENST00000547427 RARSP54136 660 aaKnown RBP30.45■■■□□ 2.47
RBFOX1-209ENST00000547427 COL4A1P02462 1669 aa30.45■■■□□ 2.46
RBFOX1-209ENST00000547427 GREM2Q9H772 168 aa30.44■■■□□ 2.46
RBFOX1-209ENST00000547427 NSFL1CQ9UNZ2 370 aaKnown RBP30.44■■■□□ 2.46
RBFOX1-209ENST00000547427 PPIP5K2O43314 1243 aa30.43■■■□□ 2.46
RBFOX1-209ENST00000547427 RRAGCQ9HB90 399 aa30.43■■■□□ 2.46
RBFOX1-209ENST00000547427 NOB1Q9ULX3 412 aaKnown RBP30.43■■■□□ 2.46
RBFOX1-209ENST00000547427 SPEF2Q9C093 1822 aa30.43■■■□□ 2.46
RBFOX1-209ENST00000547427 RTFDC1Q9BY42 306 aaPredicted RBP30.42■■■□□ 2.46
RBFOX1-209ENST00000547427 VPS33BQ9H267 617 aa30.42■■■□□ 2.46
RBFOX1-209ENST00000547427 KIF3CO14782 793 aa30.41■■■□□ 2.46
RBFOX1-209ENST00000547427 AOC3Q16853 763 aa30.41■■■□□ 2.46
RBFOX1-209ENST00000547427 RTL9Q8NET4 1388 aa30.41■■■□□ 2.46
RBFOX1-209ENST00000547427 BRPF1P55201 1214 aaPredicted RBP30.4■■■□□ 2.46
RBFOX1-209ENST00000547427 NIM1KQ8IY84 436 aa30.4■■■□□ 2.46
RBFOX1-209ENST00000547427 C16orf71Q8IYS4 520 aaPredicted RBP30.4■■■□□ 2.46
RBFOX1-209ENST00000547427 CHMP3Q9Y3E7 222 aa30.4■■■□□ 2.46
RBFOX1-209ENST00000547427 KIF16BQ96L93 1317 aa30.4■■■□□ 2.46
RBFOX1-209ENST00000547427 GPSM2P81274 684 aa30.39■■■□□ 2.46
RBFOX1-209ENST00000547427 API5Q9BZZ5 524 aaKnown RBP30.39■■■□□ 2.46
RBFOX1-209ENST00000547427 ANKIB1Q9P2G1 1089 aa30.39■■■□□ 2.46
RBFOX1-209ENST00000547427 C6orf229H3BNL8 230 aa30.38■■■□□ 2.45
RBFOX1-209ENST00000547427 DDNO94850 711 aaPredicted RBP30.38■■■□□ 2.45
RBFOX1-209ENST00000547427 CSF1RP07333 972 aa30.38■■■□□ 2.45
RBFOX1-209ENST00000547427 ITGA6P23229 1130 aa30.38■■■□□ 2.45
RBFOX1-209ENST00000547427 C1QTNF8P60827 252 aa30.38■■■□□ 2.45
RBFOX1-209ENST00000547427 FAM161AQ3B820 660 aa30.38■■■□□ 2.45
RBFOX1-209ENST00000547427 FZD9O00144 591 aa30.37■■■□□ 2.45
RBFOX1-209ENST00000547427 IGHMBP2P38935 993 aaKnown RBP30.37■■■□□ 2.45
RBFOX1-209ENST00000547427 EIF6P56537 245 aaKnown RBP30.37■■■□□ 2.45
RBFOX1-209ENST00000547427 FOXO4P98177 505 aa30.37■■■□□ 2.45
RBFOX1-209ENST00000547427 VEGFAP15692 232 aaPredicted RBP30.36■■■□□ 2.45
RBFOX1-209ENST00000547427 ZNF541Q9H0D2 1346 aa30.36■■■□□ 2.45
RBFOX1-209ENST00000547427 ANKRD18BA2A2Z9 1011 aa30.35■■■□□ 2.45
RBFOX1-209ENST00000547427 KIAA2012Q0VF49 1180 aa30.35■■■□□ 2.45
RBFOX1-209ENST00000547427 WASHC4Q2M389 1173 aa30.35■■■□□ 2.45
RBFOX1-209ENST00000547427 LMBR1LQ6UX01 489 aa30.35■■■□□ 2.45
RBFOX1-209ENST00000547427 BSDC1Q9NW68 430 aaPredicted RBP30.35■■■□□ 2.45
RBFOX1-209ENST00000547427 DUOX1Q9NRD9 1551 aa30.35■■■□□ 2.45
RBFOX1-209ENST00000547427 COL4A5P29400 1685 aa30.35■■■□□ 2.45
RBFOX1-209ENST00000547427 WDR90Q96KV7 1748 aa30.35■■■□□ 2.45
RBFOX1-209ENST00000547427 NBPF7P0C2Y1 421 aaPredicted RBP30.34■■■□□ 2.45
RBFOX1-209ENST00000547427 CCT4P50991 539 aaKnown RBP30.34■■■□□ 2.45
RBFOX1-209ENST00000547427 IFIT5Q13325 482 aaKnown RBP30.34■■■□□ 2.45
RBFOX1-209ENST00000547427 EYA3Q99504 573 aa30.34■■■□□ 2.45
RBFOX1-209ENST00000547427 MPHOSPH8Q99549 860 aa30.34■■■□□ 2.45
RBFOX1-209ENST00000547427 IPO8O15397 1037 aaKnown RBP30.33■■■□□ 2.45
RBFOX1-209ENST00000547427 FRAT1Q92837 279 aaPredicted RBP30.33■■■□□ 2.45
RBFOX1-209ENST00000547427 PODXL2Q9NZ53 605 aa30.33■■■□□ 2.45
RBFOX1-209ENST00000547427 POLLQ9UGP5 575 aa30.33■■■□□ 2.45
RBFOX1-209ENST00000547427 GGA1Q9UJY5 639 aa30.33■■■□□ 2.45
RBFOX1-209ENST00000547427 UTYO14607 1347 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 XDHP47989 1333 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 RIMBP2O15034 1052 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms