RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 SF3B3Q15393 1217 aaKnown RBP18.59■□□□□ 0.57
COL2A1-209ENST00000546974 AOC3Q16853 763 aa18.59■□□□□ 0.57
COL2A1-209ENST00000546974 DPP8Q6V1X1 898 aaPredicted RBP18.59■□□□□ 0.57
COL2A1-209ENST00000546974 MPNDQ8N594 471 aa18.59■□□□□ 0.57
COL2A1-209ENST00000546974 ZNF428Q96B54 188 aa18.59■□□□□ 0.57
COL2A1-209ENST00000546974 PHAXQ9H814 394 aaKnown RBP18.59■□□□□ 0.57
COL2A1-209ENST00000546974 CLEC11AQ9Y240 323 aa18.59■□□□□ 0.57
COL2A1-209ENST00000546974 CCDC30Q5VVM6 783 aa18.58■□□□□ 0.56
COL2A1-209ENST00000546974 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
COL2A1-209ENST00000546974 ITGBL1O95965 494 aaPredicted RBP18.57■□□□□ 0.56
COL2A1-209ENST00000546974 LMOD1P29536 600 aaPredicted RBP18.57■□□□□ 0.56
COL2A1-209ENST00000546974 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
COL2A1-209ENST00000546974 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
COL2A1-209ENST00000546974 SCNN1DP51172 638 aa18.56■□□□□ 0.56
COL2A1-209ENST00000546974 WWC1Q8IX03 1113 aa18.56■□□□□ 0.56
COL2A1-209ENST00000546974 ZBTB38Q8NAP3 1195 aaPredicted RBP18.56■□□□□ 0.56
COL2A1-209ENST00000546974 ZNRF3Q9ULT6 936 aa18.56■□□□□ 0.56
COL2A1-209ENST00000546974 LRRC37AA6NMS7 1700 aa18.56■□□□□ 0.56
COL2A1-209ENST00000546974 LTBP1Q14766 1721 aa18.56■□□□□ 0.56
COL2A1-209ENST00000546974 ANP32CO43423 234 aa18.55■□□□□ 0.56
COL2A1-209ENST00000546974 DDX58O95786 925 aaKnown RBP18.55■□□□□ 0.56
COL2A1-209ENST00000546974 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
COL2A1-209ENST00000546974 KIAA2012Q0VF49 1180 aa18.55■□□□□ 0.56
COL2A1-209ENST00000546974 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
COL2A1-209ENST00000546974 TSPYL6Q8N831 410 aa18.55■□□□□ 0.56
COL2A1-209ENST00000546974 CCDC191Q8NCU4 936 aa18.55■□□□□ 0.56
COL2A1-209ENST00000546974 MYD88Q99836 296 aa18.55■□□□□ 0.56
COL2A1-209ENST00000546974 CNTROBQ8N137 903 aa18.54■□□□□ 0.56
COL2A1-209ENST00000546974 CELF1Q92879 486 aaKnown RBP18.54■□□□□ 0.56
COL2A1-209ENST00000546974 TSR2Q969E8 191 aaKnown RBP18.54■□□□□ 0.56
COL2A1-209ENST00000546974 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
COL2A1-209ENST00000546974 IL16Q14005 1332 aa18.53■□□□□ 0.56
COL2A1-209ENST00000546974 TMEM88BA6NKF7 163 aa18.53■□□□□ 0.56
COL2A1-209ENST00000546974 EPS15P42566 896 aa18.53■□□□□ 0.56
COL2A1-209ENST00000546974 CXCL9Q07325 125 aa18.53■□□□□ 0.56
COL2A1-209ENST00000546974 MAP1SQ66K74 1059 aaPredicted RBP18.53■□□□□ 0.56
COL2A1-209ENST00000546974 USP50Q70EL3 339 aaPredicted RBP18.53■□□□□ 0.56
COL2A1-209ENST00000546974 METTL22Q9BUU2 404 aaPredicted RBP18.53■□□□□ 0.56
COL2A1-209ENST00000546974 PCCAP05165 728 aaPredicted RBP18.52■□□□□ 0.56
COL2A1-209ENST00000546974 CWC25Q9NXE8 425 aaPredicted RBP18.52■□□□□ 0.56
COL2A1-209ENST00000546974 DUOX1Q9NRD9 1551 aa18.51■□□□□ 0.55
COL2A1-209ENST00000546974 RPS8P62241 208 aaKnown RBP18.51■□□□□ 0.55
COL2A1-209ENST00000546974 CIAPIN1Q6FI81 312 aa18.51■□□□□ 0.55
COL2A1-209ENST00000546974 STK31Q9BXU1 1019 aa18.51■□□□□ 0.55
COL2A1-209ENST00000546974 GPRC5DQ9NZD1 345 aa18.51■□□□□ 0.55
COL2A1-209ENST00000546974 MKRN1Q9UHC7 482 aaKnown RBP18.51■□□□□ 0.55
COL2A1-209ENST00000546974 CNTNAP1P78357 1384 aa18.51■□□□□ 0.55
COL2A1-209ENST00000546974 CACNA1FO60840 1977 aa18.5■□□□□ 0.55
COL2A1-209ENST00000546974 PDE8AO60658 829 aa18.5■□□□□ 0.55
COL2A1-209ENST00000546974 TNIP1Q15025 636 aa18.5■□□□□ 0.55
COL2A1-209ENST00000546974 TWISTNBQ3B726 338 aaPredicted RBP18.5■□□□□ 0.55
COL2A1-209ENST00000546974 KSR2Q6VAB6 950 aa18.5■□□□□ 0.55
COL2A1-209ENST00000546974 ADARB2Q9NS39 739 aaKnown RBP18.5■□□□□ 0.55
COL2A1-209ENST00000546974 NSFL1CQ9UNZ2 370 aaKnown RBP18.5■□□□□ 0.55
COL2A1-209ENST00000546974 MAP3K2Q9Y2U5 619 aa18.5■□□□□ 0.55
COL2A1-209ENST00000546974 HSPA1AP0DMV8 641 aaKnown RBP18.49■□□□□ 0.55
COL2A1-209ENST00000546974 HSPA1BP0DMV9 641 aaKnown RBP18.49■□□□□ 0.55
COL2A1-209ENST00000546974 WASHC4Q2M389 1173 aa18.49■□□□□ 0.55
COL2A1-209ENST00000546974 CCDC152Q4G0S7 254 aa18.49■□□□□ 0.55
COL2A1-209ENST00000546974 COL4A1P02462 1669 aa18.49■□□□□ 0.55
COL2A1-209ENST00000546974 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
COL2A1-209ENST00000546974 PI4KAP2A4QPH2 592 aa18.48■□□□□ 0.55
COL2A1-209ENST00000546974 YDJCA8MPS7 323 aa18.48■□□□□ 0.55
COL2A1-209ENST00000546974 RAD17O75943 681 aa18.48■□□□□ 0.55
COL2A1-209ENST00000546974 GMPSP49915 693 aaPredicted RBP18.48■□□□□ 0.55
COL2A1-209ENST00000546974 GPSM2P81274 684 aa18.48■□□□□ 0.55
COL2A1-209ENST00000546974 PI4KAP1Q8N8J0 262 aa18.48■□□□□ 0.55
COL2A1-209ENST00000546974 SEC31BQ9NQW1 1179 aa18.48■□□□□ 0.55
COL2A1-209ENST00000546974 POLLQ9UGP5 575 aa18.48■□□□□ 0.55
COL2A1-209ENST00000546974 C6orf229H3BNL8 230 aa18.47■□□□□ 0.55
COL2A1-209ENST00000546974 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
COL2A1-209ENST00000546974 EYA3Q99504 573 aa18.47■□□□□ 0.55
COL2A1-209ENST00000546974 BCL2L13Q9BXK5 485 aa18.47■□□□□ 0.55
COL2A1-209ENST00000546974 TRPM7Q96QT4 1865 aa18.47■□□□□ 0.55
COL2A1-209ENST00000546974 IGKV5-2P06315 115 aa18.46■□□□□ 0.55
COL2A1-209ENST00000546974 NEXNQ0ZGT2 675 aa18.46■□□□□ 0.55
COL2A1-209ENST00000546974 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
COL2A1-209ENST00000546974 PODXL2Q9NZ53 605 aa18.46■□□□□ 0.55
COL2A1-209ENST00000546974 MYH3P11055 1940 aa18.46■□□□□ 0.55
COL2A1-209ENST00000546974 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
COL2A1-209ENST00000546974 COL13A1Q5TAT6 717 aaPredicted RBP18.45■□□□□ 0.54
COL2A1-209ENST00000546974 TBC1D16Q8TBP0 767 aa18.45■□□□□ 0.54
COL2A1-209ENST00000546974 RASSF10A6NK89 507 aa18.44■□□□□ 0.54
COL2A1-209ENST00000546974 RIMBP2O15034 1052 aa18.44■□□□□ 0.54
COL2A1-209ENST00000546974 VEGFBP49765 207 aa18.44■□□□□ 0.54
COL2A1-209ENST00000546974 DEFB115Q30KQ5 88 aa18.44■□□□□ 0.54
COL2A1-209ENST00000546974 G2E3Q7L622 706 aa18.44■□□□□ 0.54
COL2A1-209ENST00000546974 PGAP2Q9UHJ9 254 aa18.44■□□□□ 0.54
COL2A1-209ENST00000546974 CNOT7Q9UIV1 285 aaKnown RBP18.44■□□□□ 0.54
COL2A1-209ENST00000546974 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
COL2A1-209ENST00000546974 NEURL1BA8MQ27 555 aa18.43■□□□□ 0.54
COL2A1-209ENST00000546974 ZC3H15Q8WU90 426 aaKnown RBP18.43■□□□□ 0.54
COL2A1-209ENST00000546974 DPF2Q92785 391 aa18.43■□□□□ 0.54
COL2A1-209ENST00000546974 DBNDD1Q9H9R9 158 aa18.43■□□□□ 0.54
COL2A1-209ENST00000546974 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
COL2A1-209ENST00000546974 H7C1D1 291 aa18.42■□□□□ 0.54
COL2A1-209ENST00000546974 PSMD14O00487 310 aa18.42■□□□□ 0.54
COL2A1-209ENST00000546974 ECE2O60344 883 aa18.42■□□□□ 0.54
COL2A1-209ENST00000546974 VAMP4O75379 141 aa18.42■□□□□ 0.54
COL2A1-209ENST00000546974 CTSWP56202 376 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms