RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 WBP1LQ9NX94 342 aa26.16■■□□□ 1.78
SCN8A-204ENST00000546961 GPRC5DQ9NZD1 345 aa26.16■■□□□ 1.78
SCN8A-204ENST00000546961 ADAMTSL1Q8N6G6 1762 aa26.15■■□□□ 1.78
SCN8A-204ENST00000546961 ADARB2Q9NS39 739 aaKnown RBP26.15■■□□□ 1.78
SCN8A-204ENST00000546961 WDR33Q9C0J8 1336 aaKnown RBP26.14■■□□□ 1.78
SCN8A-204ENST00000546961 ATP5J2-PTCD1G3V325 749 aa26.14■■□□□ 1.78
SCN8A-204ENST00000546961 TRAF5O00463 557 aa26.14■■□□□ 1.78
SCN8A-204ENST00000546961 FAM89AQ96GI7 184 aa26.14■■□□□ 1.78
SCN8A-204ENST00000546961 PRDM10Q9NQV6 1147 aa26.14■■□□□ 1.78
SCN8A-204ENST00000546961 DBF4Q9UBU7 674 aaPredicted RBP26.14■■□□□ 1.78
SCN8A-204ENST00000546961 RAD17O75943 681 aa26.13■■□□□ 1.77
SCN8A-204ENST00000546961 GMPSP49915 693 aaPredicted RBP26.13■■□□□ 1.77
SCN8A-204ENST00000546961 KIAA2012Q0VF49 1180 aa26.13■■□□□ 1.77
SCN8A-204ENST00000546961 CIAPIN1Q6FI81 312 aa26.13■■□□□ 1.77
SCN8A-204ENST00000546961 HOXB7P09629 217 aa26.12■■□□□ 1.77
SCN8A-204ENST00000546961 DUSP27Q5VZP5 1158 aa26.12■■□□□ 1.77
SCN8A-204ENST00000546961 PAXIP1Q6ZW49 1069 aaPredicted RBP26.12■■□□□ 1.77
SCN8A-204ENST00000546961 CFAP44Q96MT7 982 aa26.12■■□□□ 1.77
SCN8A-204ENST00000546961 BCL2L13Q9BXK5 485 aa26.12■■□□□ 1.77
SCN8A-204ENST00000546961 LTBP1Q14766 1721 aa26.11■■□□□ 1.77
SCN8A-204ENST00000546961 TNIP1Q15025 636 aa26.11■■□□□ 1.77
SCN8A-204ENST00000546961 RTL5Q5HYW3 569 aaPredicted RBP26.11■■□□□ 1.77
SCN8A-204ENST00000546961 CST9Q5W186 159 aa26.11■■□□□ 1.77
SCN8A-204ENST00000546961 ISCA1Q9BUE6 129 aa26.11■■□□□ 1.77
SCN8A-204ENST00000546961 HYPKQ9NX55 129 aa26.11■■□□□ 1.77
SCN8A-204ENST00000546961 LBX1P52954 281 aa26.1■■□□□ 1.77
SCN8A-204ENST00000546961 TMC4Q7Z404 712 aa26.1■■□□□ 1.77
SCN8A-204ENST00000546961 MAP2K1Q02750 393 aaPredicted RBP26.09■■□□□ 1.77
SCN8A-204ENST00000546961 GRM1Q13255 1194 aa26.09■■□□□ 1.77
SCN8A-204ENST00000546961 MBIPQ9NS73 344 aa26.09■■□□□ 1.77
SCN8A-204ENST00000546961 SF3B3Q15393 1217 aaKnown RBP26.08■■□□□ 1.77
SCN8A-204ENST00000546961 CAPNS2Q96L46 248 aa26.08■■□□□ 1.77
SCN8A-204ENST00000546961 NSFL1CQ9UNZ2 370 aaKnown RBP26.08■■□□□ 1.77
SCN8A-204ENST00000546961 CELF1Q92879 486 aaKnown RBP26.07■■□□□ 1.76
SCN8A-204ENST00000546961 ELL2O00472 640 aaPredicted RBP26.06■■□□□ 1.76
SCN8A-204ENST00000546961 ECE1P42892 770 aa26.06■■□□□ 1.76
SCN8A-204ENST00000546961 WASHC4Q2M389 1173 aa26.06■■□□□ 1.76
SCN8A-204ENST00000546961 CYP4F22Q6NT55 531 aa26.06■■□□□ 1.76
SCN8A-204ENST00000546961 CNOT7Q9UIV1 285 aaKnown RBP26.06■■□□□ 1.76
SCN8A-204ENST00000546961 YDJCA8MPS7 323 aa26.05■■□□□ 1.76
SCN8A-204ENST00000546961 C6orf229H3BNL8 230 aa26.05■■□□□ 1.76
SCN8A-204ENST00000546961 RIMBP2O15034 1052 aa26.05■■□□□ 1.76
SCN8A-204ENST00000546961 HIRAP54198 1017 aaPredicted RBP26.05■■□□□ 1.76
SCN8A-204ENST00000546961 TRIM28Q13263 835 aaKnown RBP26.05■■□□□ 1.76
SCN8A-204ENST00000546961 RIC3Q7Z5B4 369 aa26.05■■□□□ 1.76
SCN8A-204ENST00000546961 GPR101Q96P66 508 aaPredicted RBP26.05■■□□□ 1.76
SCN8A-204ENST00000546961 GLIS2Q9BZE0 524 aaPredicted RBP26.05■■□□□ 1.76
SCN8A-204ENST00000546961 H7C1D1 291 aa26.04■■□□□ 1.76
SCN8A-204ENST00000546961 IRS4O14654 1257 aaPredicted RBP26.04■■□□□ 1.76
SCN8A-204ENST00000546961 APAF1O14727 1248 aa26.04■■□□□ 1.76
SCN8A-204ENST00000546961 CELF2O95319 508 aaKnown RBP26.04■■□□□ 1.76
SCN8A-204ENST00000546961 PRKRIP1Q9H875 184 aaPredicted RBP26.04■■□□□ 1.76
SCN8A-204ENST00000546961 PGAP2Q9UHJ9 254 aa26.04■■□□□ 1.76
SCN8A-204ENST00000546961 TLL2Q9Y6L7 1015 aa26.04■■□□□ 1.76
SCN8A-204ENST00000546961 SHTN1A0MZ66 631 aa26.03■■□□□ 1.76
SCN8A-204ENST00000546961 ZNF853P0CG23 659 aa26.03■■□□□ 1.76
SCN8A-204ENST00000546961 HSPA8P11142 646 aaKnown RBP26.03■■□□□ 1.76
SCN8A-204ENST00000546961 ANKRD36CQ5JPF3 1778 aa26.02■■□□□ 1.76
SCN8A-204ENST00000546961 RPS8P62241 208 aaKnown RBP26.02■■□□□ 1.76
SCN8A-204ENST00000546961 GPSM2P81274 684 aa26.02■■□□□ 1.76
SCN8A-204ENST00000546961 TRPM4Q8TD43 1214 aa26.02■■□□□ 1.76
SCN8A-204ENST00000546961 ZC3H15Q8WU90 426 aaKnown RBP26.02■■□□□ 1.76
SCN8A-204ENST00000546961 PHAXQ9H814 394 aaKnown RBP26.02■■□□□ 1.76
SCN8A-204ENST00000546961 DBNDD1Q9H9R9 158 aa26.02■■□□□ 1.76
SCN8A-204ENST00000546961 POLLQ9UGP5 575 aa26.02■■□□□ 1.76
SCN8A-204ENST00000546961 ZBTB12Q9Y330 459 aaPredicted RBP26.02■■□□□ 1.76
SCN8A-204ENST00000546961 LAMB2P55268 1798 aa26.02■■□□□ 1.76
SCN8A-204ENST00000546961 TAF1P21675 1872 aa26.02■■□□□ 1.76
SCN8A-204ENST00000546961 GNAI1P63096 354 aa26.01■■□□□ 1.75
SCN8A-204ENST00000546961 GOLGA2Q08379 1002 aa26.01■■□□□ 1.75
SCN8A-204ENST00000546961 BEGAINQ9BUH8 593 aa26.01■■□□□ 1.75
SCN8A-204ENST00000546961 CDHR2Q9BYE9 1310 aa26.01■■□□□ 1.75
SCN8A-204ENST00000546961 IFT57Q9NWB7 429 aa26.01■■□□□ 1.75
SCN8A-204ENST00000546961 CDC37L1Q7L3B6 337 aa26■■□□□ 1.75
SCN8A-204ENST00000546961 MICALL2Q8IY33 904 aa26■■□□□ 1.75
SCN8A-204ENST00000546961 ZNF408Q9H9D4 720 aa26■■□□□ 1.75
SCN8A-204ENST00000546961 PSMD14O00487 310 aa25.99■■□□□ 1.75
SCN8A-204ENST00000546961 CALD1Q05682 793 aaKnown RBP25.99■■□□□ 1.75
SCN8A-204ENST00000546961 DOK7Q18PE1 504 aa25.99■■□□□ 1.75
SCN8A-204ENST00000546961 SAPCD2Q86UD0 394 aa25.99■■□□□ 1.75
SCN8A-204ENST00000546961 ZBTB38Q8NAP3 1195 aaPredicted RBP25.99■■□□□ 1.75
SCN8A-204ENST00000546961 MYD88Q99836 296 aa25.99■■□□□ 1.75
SCN8A-204ENST00000546961 AOC2O75106 756 aa25.98■■□□□ 1.75
SCN8A-204ENST00000546961 USP48Q86UV5 1035 aa25.98■■□□□ 1.75
SCN8A-204ENST00000546961 EYA3Q99504 573 aa25.98■■□□□ 1.75
SCN8A-204ENST00000546961 KCNQ5Q9NR82 932 aa25.98■■□□□ 1.75
SCN8A-204ENST00000546961 SAMD7Q7Z3H4 446 aa25.97■■□□□ 1.75
SCN8A-204ENST00000546961 C8orf58Q8NAV2 365 aa25.97■■□□□ 1.75
SCN8A-204ENST00000546961 TBC1D16Q8TBP0 767 aa25.97■■□□□ 1.75
SCN8A-204ENST00000546961 DPF2Q92785 391 aa25.97■■□□□ 1.75
SCN8A-204ENST00000546961 JARID2Q92833 1246 aaPredicted RBP25.97■■□□□ 1.75
SCN8A-204ENST00000546961 SEC31BQ9NQW1 1179 aa25.97■■□□□ 1.75
SCN8A-204ENST00000546961 HSP90B1P14625 803 aaKnown RBP25.96■■□□□ 1.75
SCN8A-204ENST00000546961 MAP2K2P36507 400 aa25.96■■□□□ 1.75
SCN8A-204ENST00000546961 RBM26Q5T8P6 1007 aaKnown RBP25.96■■□□□ 1.75
SCN8A-204ENST00000546961 ZC3H12CQ9C0D7 883 aaKnown RBP25.96■■□□□ 1.75
SCN8A-204ENST00000546961 ECE2O60344 883 aa25.95■■□□□ 1.74
SCN8A-204ENST00000546961 TBC1D10BQ4KMP7 808 aaPredicted RBP25.95■■□□□ 1.74
SCN8A-204ENST00000546961 DLK2Q6UY11 383 aa25.94■■□□□ 1.74
SCN8A-204ENST00000546961 CCDC191Q8NCU4 936 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms