RNA–Protein interactions for RNA: ENST00000545809.1

CCDC189-210, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,055 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-210ENST00000545809 TMX4Q9H1E5 349 aaPredicted RBP29.25■■■□□ 2.27
CCDC189-210ENST00000545809 FER1L6Q2WGJ9 1857 aa29.25■■■□□ 2.27
CCDC189-210ENST00000545809 ALDH1L1O75891 902 aa29.24■■■□□ 2.27
CCDC189-210ENST00000545809 BRPF1P55201 1214 aaPredicted RBP29.24■■■□□ 2.27
CCDC189-210ENST00000545809 CCDC152Q4G0S7 254 aa29.24■■■□□ 2.27
CCDC189-210ENST00000545809 ZNF784Q8NCA9 323 aaPredicted RBP29.23■■■□□ 2.27
CCDC189-210ENST00000545809 GRIPAP1Q4V328 841 aa29.22■■■□□ 2.27
CCDC189-210ENST00000545809 ATP6V0A2Q9Y487 856 aa29.22■■■□□ 2.27
CCDC189-210ENST00000545809 PRELPP51888 382 aa29.21■■■□□ 2.27
CCDC189-210ENST00000545809 CASP7P55210 303 aa29.21■■■□□ 2.27
CCDC189-210ENST00000545809 CTSWP56202 376 aa29.21■■■□□ 2.27
CCDC189-210ENST00000545809 FKBP4Q02790 459 aaKnown RBP eCLIP29.21■■■□□ 2.27
CCDC189-210ENST00000545809 NOB1Q9ULX3 412 aaKnown RBP29.21■■■□□ 2.27
CCDC189-210ENST00000545809 SBF1O95248 1867 aa29.21■■■□□ 2.27
CCDC189-210ENST00000545809 KIF16BQ96L93 1317 aa29.2■■■□□ 2.27
CCDC189-210ENST00000545809 TMC4Q7Z404 712 aa29.2■■■□□ 2.26
CCDC189-210ENST00000545809 C9orf78Q9NZ63 289 aaPredicted RBP29.2■■■□□ 2.26
CCDC189-210ENST00000545809 GRM8O00222 908 aa29.19■■■□□ 2.26
CCDC189-210ENST00000545809 SP8Q8IXZ3 490 aa29.19■■■□□ 2.26
CCDC189-210ENST00000545809 CELF1Q92879 486 aaKnown RBP29.19■■■□□ 2.26
CCDC189-210ENST00000545809 CCDC85AQ96PX6 553 aaPredicted RBP29.19■■■□□ 2.26
CCDC189-210ENST00000545809 PLA2G12BQ9BX93 195 aa29.19■■■□□ 2.26
CCDC189-210ENST00000545809 API5Q9BZZ5 524 aaKnown RBP29.18■■■□□ 2.26
CCDC189-210ENST00000545809 SNED1Q8TER0 1413 aa29.18■■■□□ 2.26
CCDC189-210ENST00000545809 SLC51AQ86UW1 340 aa29.17■■■□□ 2.26
CCDC189-210ENST00000545809 TTLL11Q8NHH1 800 aa29.17■■■□□ 2.26
CCDC189-210ENST00000545809 PSMD1Q99460 953 aa29.17■■■□□ 2.26
CCDC189-210ENST00000545809 SEC31BQ9NQW1 1179 aa29.17■■■□□ 2.26
CCDC189-210ENST00000545809 RPS8P62241 208 aaKnown RBP29.16■■■□□ 2.26
CCDC189-210ENST00000545809 TAF1P21675 1872 aa29.15■■■□□ 2.26
CCDC189-210ENST00000545809 ZNF277Q9NRM2 450 aaPredicted RBP29.15■■■□□ 2.26
CCDC189-210ENST00000545809 ZC3H4Q9UPT8 1303 aaKnown RBP29.15■■■□□ 2.26
CCDC189-210ENST00000545809 ARHGAP45Q92619 1136 aa29.14■■■□□ 2.26
CCDC189-210ENST00000545809 MYH3P11055 1940 aa29.14■■■□□ 2.25
CCDC189-210ENST00000545809 RTL9Q8NET4 1388 aa29.13■■■□□ 2.25
CCDC189-210ENST00000545809 BCAR3O75815 825 aa29.13■■■□□ 2.25
CCDC189-210ENST00000545809 GREM2Q9H772 168 aa29.13■■■□□ 2.25
CCDC189-210ENST00000545809 CCDC88AQ3V6T2 1871 aa29.12■■■□□ 2.25
CCDC189-210ENST00000545809 IPO8O15397 1037 aaKnown RBP29.12■■■□□ 2.25
CCDC189-210ENST00000545809 CCT4P50991 539 aaKnown RBP29.12■■■□□ 2.25
CCDC189-210ENST00000545809 DPP8Q6V1X1 898 aaPredicted RBP29.12■■■□□ 2.25
CCDC189-210ENST00000545809 MPNDQ8N594 471 aa29.12■■■□□ 2.25
CCDC189-210ENST00000545809 ZNF526Q8TF50 670 aaPredicted RBP29.12■■■□□ 2.25
CCDC189-210ENST00000545809 CDC5LQ99459 802 aaKnown RBP29.12■■■□□ 2.25
CCDC189-210ENST00000545809 COL4A1P02462 1669 aa29.12■■■□□ 2.25
CCDC189-210ENST00000545809 CSF1RP07333 972 aa29.11■■■□□ 2.25
CCDC189-210ENST00000545809 IARSP41252 1262 aaKnown RBP29.11■■■□□ 2.25
CCDC189-210ENST00000545809 ANKRD18AQ8IVF6 992 aa29.11■■■□□ 2.25
CCDC189-210ENST00000545809 SUPT20HQ8NEM7 779 aa29.1■■■□□ 2.25
CCDC189-210ENST00000545809 FRAT1Q92837 279 aaPredicted RBP29.1■■■□□ 2.25
CCDC189-210ENST00000545809 GPBP1L1Q9HC44 474 aaPredicted RBP29.1■■■□□ 2.25
CCDC189-210ENST00000545809 TIAM2Q8IVF5 1701 aa29.1■■■□□ 2.25
CCDC189-210ENST00000545809 UTYO14607 1347 aa29.1■■■□□ 2.25
CCDC189-210ENST00000545809 LRRC37AA6NMS7 1700 aa29.09■■■□□ 2.25
CCDC189-210ENST00000545809 FOXO4P98177 505 aa29.09■■■□□ 2.25
CCDC189-210ENST00000545809 NBPF7P0C2Y1 421 aaPredicted RBP29.08■■■□□ 2.25
CCDC189-210ENST00000545809 FAM161AQ3B820 660 aa29.08■■■□□ 2.25
CCDC189-210ENST00000545809 RTFDC1Q9BY42 306 aaPredicted RBP29.08■■■□□ 2.25
CCDC189-210ENST00000545809 DICER1Q9UPY3 1922 aaKnown RBP29.08■■■□□ 2.25
CCDC189-210ENST00000545809 ITGA6P23229 1130 aa29.07■■■□□ 2.24
CCDC189-210ENST00000545809 KDM2BQ8NHM5 1336 aa29.06■■■□□ 2.24
CCDC189-210ENST00000545809 EPHA10Q5JZY3 1008 aa29.06■■■□□ 2.24
CCDC189-210ENST00000545809 LMBR1LQ6UX01 489 aa29.06■■■□□ 2.24
CCDC189-210ENST00000545809 SUCLG2Q96I99 432 aa29.06■■■□□ 2.24
CCDC189-210ENST00000545809 USP44Q9H0E7 712 aa29.06■■■□□ 2.24
CCDC189-210ENST00000545809 NSFL1CQ9UNZ2 370 aaKnown RBP29.06■■■□□ 2.24
CCDC189-210ENST00000545809 CHMP3Q9Y3E7 222 aa29.06■■■□□ 2.24
CCDC189-210ENST00000545809 ATF7IPQ6VMQ6 1270 aa29.05■■■□□ 2.24
CCDC189-210ENST00000545809 LARGE2Q8N3Y3 721 aa29.05■■■□□ 2.24
CCDC189-210ENST00000545809 JDP2Q8WYK2 163 aa29.05■■■□□ 2.24
CCDC189-210ENST00000545809 VPS33BQ9H267 617 aa29.05■■■□□ 2.24
CCDC189-210ENST00000545809 ANKRD18BA2A2Z9 1011 aa29.04■■■□□ 2.24
CCDC189-210ENST00000545809 TRIM27P14373 513 aa29.04■■■□□ 2.24
CCDC189-210ENST00000545809 IGHMBP2P38935 993 aaKnown RBP29.04■■■□□ 2.24
CCDC189-210ENST00000545809 GPSM2P81274 684 aa29.04■■■□□ 2.24
CCDC189-210ENST00000545809 BSDC1Q9NW68 430 aaPredicted RBP29.04■■■□□ 2.24
CCDC189-210ENST00000545809 PPIP5K2O43314 1243 aa29.03■■■□□ 2.24
CCDC189-210ENST00000545809 IFIT5Q13325 482 aaKnown RBP29.03■■■□□ 2.24
CCDC189-210ENST00000545809 ZKSCAN2Q63HK3 967 aa29.03■■■□□ 2.24
CCDC189-210ENST00000545809 DPY19L2Q6NUT2 758 aa29.03■■■□□ 2.24
CCDC189-210ENST00000545809 GLTPD2A6NH11 291 aa29.02■■■□□ 2.24
CCDC189-210ENST00000545809 ANKIB1Q9P2G1 1089 aa29.02■■■□□ 2.24
CCDC189-210ENST00000545809 AOC3Q16853 763 aa29.01■■■□□ 2.23
CCDC189-210ENST00000545809 INTS3Q68E01 1043 aaKnown RBP29.01■■■□□ 2.23
CCDC189-210ENST00000545809 KAZALD1Q96I82 304 aa29.01■■■□□ 2.23
CCDC189-210ENST00000545809 DUOX1Q9NRD9 1551 aa29.01■■■□□ 2.23
CCDC189-210ENST00000545809 C6orf229H3BNL8 230 aa29■■■□□ 2.23
CCDC189-210ENST00000545809 CCDC57Q2TAC2 916 aa29■■■□□ 2.23
CCDC189-210ENST00000545809 MPHOSPH8Q99549 860 aa29■■■□□ 2.23
CCDC189-210ENST00000545809 BICC1Q9H694 974 aaKnown RBP29■■■□□ 2.23
CCDC189-210ENST00000545809 PODXL2Q9NZ53 605 aa29■■■□□ 2.23
CCDC189-210ENST00000545809 KIAA2012Q0VF49 1180 aa28.99■■■□□ 2.23
CCDC189-210ENST00000545809 NIM1KQ8IY84 436 aa28.99■■■□□ 2.23
CCDC189-210ENST00000545809 CLUAP1Q96AJ1 413 aa28.99■■■□□ 2.23
CCDC189-210ENST00000545809 TNNQ9UQP3 1299 aa28.99■■■□□ 2.23
CCDC189-210ENST00000545809 XDHP47989 1333 aa28.98■■■□□ 2.23
CCDC189-210ENST00000545809 FZD9O00144 591 aa28.98■■■□□ 2.23
CCDC189-210ENST00000545809 UBTFL1P0CB47 393 aaPredicted RBP28.98■■■□□ 2.23
CCDC189-210ENST00000545809 TBC1D16Q8TBP0 767 aa28.98■■■□□ 2.23
CCDC189-210ENST00000545809 YTHDC1Q96MU7 727 aaKnown RBP28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms