RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
LDHC-208ENST00000544105 AOX1Q06278 1338 aa12.69□□□□□ -0.38
LDHC-208ENST00000544105 CDC45O75419 566 aa12.69□□□□□ -0.38
LDHC-208ENST00000544105 IFIT2P09913 472 aaKnown RBP12.69□□□□□ -0.38
LDHC-208ENST00000544105 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
LDHC-208ENST00000544105 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
LDHC-208ENST00000544105 IL1RAPL2Q9NP60 686 aa12.69□□□□□ -0.38
LDHC-208ENST00000544105 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
LDHC-208ENST00000544105 AFDNP55196 1824 aaKnown RBP12.69□□□□□ -0.38
LDHC-208ENST00000544105 CNTNAP4Q9C0A0 1308 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 ERC2O15083 957 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 GPTP24298 496 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 CASP7P55210 303 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 HLFQ16534 295 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 CCDC57Q2TAC2 916 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 PARP10Q53GL7 1025 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 RTL5Q5HYW3 569 aaPredicted RBP12.68□□□□□ -0.38
LDHC-208ENST00000544105 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 COPRSQ9NQ92 184 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
LDHC-208ENST00000544105 STAP2Q9UGK3 403 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 TRMT112Q9UI30 125 aaKnown RBP12.68□□□□□ -0.38
LDHC-208ENST00000544105 TJP1Q07157 1748 aa12.68□□□□□ -0.38
LDHC-208ENST00000544105 RGL2O15211 777 aa12.67□□□□□ -0.38
LDHC-208ENST00000544105 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
LDHC-208ENST00000544105 FOXO4P98177 505 aa12.67□□□□□ -0.38
LDHC-208ENST00000544105 TAF7LQ5H9L4 462 aa12.67□□□□□ -0.38
LDHC-208ENST00000544105 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
LDHC-208ENST00000544105 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
LDHC-208ENST00000544105 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
LDHC-208ENST00000544105 PA2G4Q9UQ80 394 aaKnown RBP12.67□□□□□ -0.38
LDHC-208ENST00000544105 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
LDHC-208ENST00000544105 CDHR2Q9BYE9 1310 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 LCE2DQ5TA82 110 aaPredicted RBP12.66□□□□□ -0.38
LDHC-208ENST00000544105 CLEC4GQ6UXB4 293 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 ZNF34Q8IZ26 560 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 LINC00116Q8NCU8 138 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
LDHC-208ENST00000544105 FAM89AQ96GI7 184 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 AK7Q96M32 723 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 UTP14AQ9BVJ6 771 aaKnown RBP12.66□□□□□ -0.38
LDHC-208ENST00000544105 PLA2G12BQ9BX93 195 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 SIL1Q9H173 461 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
LDHC-208ENST00000544105 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
LDHC-208ENST00000544105 TTC41PQ6P2S7 1318 aa12.65□□□□□ -0.38
LDHC-208ENST00000544105 NHSQ6T4R5 1651 aa12.65□□□□□ -0.38
LDHC-208ENST00000544105 TRIM6-TRIM34B2RNG4 842 aa12.65□□□□□ -0.38
LDHC-208ENST00000544105 SDSP20132 328 aa12.65□□□□□ -0.38
LDHC-208ENST00000544105 RXRBP28702 533 aa12.65□□□□□ -0.38
LDHC-208ENST00000544105 AACSQ86V21 672 aa12.65□□□□□ -0.38
LDHC-208ENST00000544105 IPO9Q96P70 1041 aaKnown RBP12.65□□□□□ -0.38
LDHC-208ENST00000544105 CICQ96RK0 1608 aaPredicted RBP12.65□□□□□ -0.38
LDHC-208ENST00000544105 IRS4O14654 1257 aaPredicted RBP12.64□□□□□ -0.39
LDHC-208ENST00000544105 PDE8AO60658 829 aa12.64□□□□□ -0.39
LDHC-208ENST00000544105 ZPR1O75312 459 aa12.64□□□□□ -0.39
LDHC-208ENST00000544105 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
LDHC-208ENST00000544105 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
LDHC-208ENST00000544105 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
LDHC-208ENST00000544105 IL15P40933 162 aaPredicted RBP12.64□□□□□ -0.39
LDHC-208ENST00000544105 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
LDHC-208ENST00000544105 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
LDHC-208ENST00000544105 PTPN12Q05209 780 aaKnown RBP12.64□□□□□ -0.39
LDHC-208ENST00000544105 IFIT5Q13325 482 aaKnown RBP12.64□□□□□ -0.39
LDHC-208ENST00000544105 ZNF467Q7Z7K2 595 aaPredicted RBP12.64□□□□□ -0.39
LDHC-208ENST00000544105 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
LDHC-208ENST00000544105 ECHDC1Q9NTX5 307 aa12.64□□□□□ -0.39
LDHC-208ENST00000544105 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
LDHC-208ENST00000544105 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
LDHC-208ENST00000544105 ANKRD18BA2A2Z9 1011 aa12.63□□□□□ -0.39
LDHC-208ENST00000544105 GNPATO15228 680 aa12.63□□□□□ -0.39
LDHC-208ENST00000544105 CIAO1O76071 339 aa12.63□□□□□ -0.39
LDHC-208ENST00000544105 RFX5P48382 616 aaPredicted RBP12.63□□□□□ -0.39
LDHC-208ENST00000544105 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
LDHC-208ENST00000544105 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
LDHC-208ENST00000544105 PTF1AQ7RTS3 328 aa12.63□□□□□ -0.39
LDHC-208ENST00000544105 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
LDHC-208ENST00000544105 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
LDHC-208ENST00000544105 EYA2O00167 538 aa12.62□□□□□ -0.39
LDHC-208ENST00000544105 SASH1O94885 1247 aa12.62□□□□□ -0.39
LDHC-208ENST00000544105 CSF1RP07333 972 aa12.62□□□□□ -0.39
LDHC-208ENST00000544105 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
LDHC-208ENST00000544105 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
LDHC-208ENST00000544105 ERICH6Q7L0X2 663 aa12.62□□□□□ -0.39
LDHC-208ENST00000544105 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
LDHC-208ENST00000544105 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
LDHC-208ENST00000544105 BTAF1O14981 1849 aa12.62□□□□□ -0.39
LDHC-208ENST00000544105 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
LDHC-208ENST00000544105 TRIM37O94972 964 aa12.61□□□□□ -0.39
LDHC-208ENST00000544105 REC8O95072 547 aa12.61□□□□□ -0.39
LDHC-208ENST00000544105 RFC4P35249 363 aa12.61□□□□□ -0.39
LDHC-208ENST00000544105 CTSWP56202 376 aa12.61□□□□□ -0.39
LDHC-208ENST00000544105 KCNQ4P56696 695 aa12.61□□□□□ -0.39
LDHC-208ENST00000544105 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
LDHC-208ENST00000544105 SUSD4Q5VX71 490 aa12.61□□□□□ -0.39
LDHC-208ENST00000544105 KLHDC4Q8TBB5 520 aa12.61□□□□□ -0.39
LDHC-208ENST00000544105 FBXO41Q8TF61 875 aa12.61□□□□□ -0.39
LDHC-208ENST00000544105 NYXQ9GZU5 481 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms