RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 TRIM28Q13263 835 aaKnown RBP9.2□□□□□ -0.94
NUP43-206ENST00000543637 GRAPQ13588 217 aa9.2□□□□□ -0.94
NUP43-206ENST00000543637 CCDC184Q52MB2 194 aa9.2□□□□□ -0.94
NUP43-206ENST00000543637 NCBP3Q53F19 620 aaKnown RBP9.2□□□□□ -0.94
NUP43-206ENST00000543637 RTL5Q5HYW3 569 aaPredicted RBP9.2□□□□□ -0.94
NUP43-206ENST00000543637 DCAF8Q5TAQ9 597 aa9.2□□□□□ -0.94
NUP43-206ENST00000543637 LDHDQ86WU2 507 aa9.2□□□□□ -0.94
NUP43-206ENST00000543637 WWC1Q8IX03 1113 aa9.2□□□□□ -0.94
NUP43-206ENST00000543637 GRAPLQ8TC17 118 aaPredicted RBP9.2□□□□□ -0.94
NUP43-206ENST00000543637 ZNF428Q96B54 188 aa9.2□□□□□ -0.94
NUP43-206ENST00000543637 TAF1DQ9H5J8 278 aaPredicted RBP9.2□□□□□ -0.94
NUP43-206ENST00000543637 SALL2Q9Y467 1007 aaPredicted RBP9.2□□□□□ -0.94
NUP43-206ENST00000543637 ABCC4O15439 1325 aa9.2□□□□□ -0.94
NUP43-206ENST00000543637 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
NUP43-206ENST00000543637 UTRNP46939 3433 aa9.19□□□□□ -0.94
NUP43-206ENST00000543637 HTRA3P83110 453 aa9.19□□□□□ -0.94
NUP43-206ENST00000543637 TNIP1Q15025 636 aa9.19□□□□□ -0.94
NUP43-206ENST00000543637 SF3B3Q15393 1217 aaKnown RBP9.19□□□□□ -0.94
NUP43-206ENST00000543637 AOC3Q16853 763 aa9.19□□□□□ -0.94
NUP43-206ENST00000543637 TWISTNBQ3B726 338 aaPredicted RBP9.19□□□□□ -0.94
NUP43-206ENST00000543637 C3orf67Q6ZVT6 689 aa9.19□□□□□ -0.94
NUP43-206ENST00000543637 FAM9BQ8IZU0 186 aa9.19□□□□□ -0.94
NUP43-206ENST00000543637 ZBTB38Q8NAP3 1195 aaPredicted RBP9.19□□□□□ -0.94
NUP43-206ENST00000543637 CCDC191Q8NCU4 936 aa9.19□□□□□ -0.94
NUP43-206ENST00000543637 CWC25Q9NXE8 425 aaPredicted RBP9.19□□□□□ -0.94
NUP43-206ENST00000543637 NSFL1CQ9UNZ2 370 aaKnown RBP9.19□□□□□ -0.94
NUP43-206ENST00000543637 IL16Q14005 1332 aa9.19□□□□□ -0.94
NUP43-206ENST00000543637 C6orf229H3BNL8 230 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 PDE8AO60658 829 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 PCCAP05165 728 aaPredicted RBP9.18□□□□□ -0.94
NUP43-206ENST00000543637 C1QBPQ07021 282 aaKnown RBP9.18□□□□□ -0.94
NUP43-206ENST00000543637 GOLGB1Q14789 3259 aaKnown RBP9.18□□□□□ -0.94
NUP43-206ENST00000543637 WASHC4Q2M389 1173 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 CIAPIN1Q6FI81 312 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 KSR2Q6VAB6 950 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 WDR63Q8IWG1 891 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 TSR2Q969E8 191 aaKnown RBP9.18□□□□□ -0.94
NUP43-206ENST00000543637 EYA3Q99504 573 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 METTL22Q9BUU2 404 aaPredicted RBP9.18□□□□□ -0.94
NUP43-206ENST00000543637 BCL2L13Q9BXK5 485 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 ZNF541Q9H0D2 1346 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 ZNRF3Q9ULT6 936 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 MAP3K2Q9Y2U5 619 aa9.18□□□□□ -0.94
NUP43-206ENST00000543637 SLC4A2P04920 1241 aa9.17□□□□□ -0.94
NUP43-206ENST00000543637 RPS8P62241 208 aaKnown RBP9.17□□□□□ -0.94
NUP43-206ENST00000543637 CCDC152Q4G0S7 254 aa9.17□□□□□ -0.94
NUP43-206ENST00000543637 USP50Q70EL3 339 aaPredicted RBP9.17□□□□□ -0.94
NUP43-206ENST00000543637 CNTROBQ8N137 903 aa9.17□□□□□ -0.94
NUP43-206ENST00000543637 TSPYL6Q8N831 410 aa9.17□□□□□ -0.94
NUP43-206ENST00000543637 RTFDC1Q9BY42 306 aaPredicted RBP9.17□□□□□ -0.94
NUP43-206ENST00000543637 CREBZFQ9NS37 354 aa9.17□□□□□ -0.94
NUP43-206ENST00000543637 MYH3P11055 1940 aa9.17□□□□□ -0.94
NUP43-206ENST00000543637 PI4KAP2A4QPH2 592 aa9.16□□□□□ -0.94
NUP43-206ENST00000543637 TMEM88BA6NKF7 163 aa9.16□□□□□ -0.94
NUP43-206ENST00000543637 RIMBP2O15034 1052 aa9.16□□□□□ -0.94
NUP43-206ENST00000543637 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
NUP43-206ENST00000543637 POTEJP0CG39 1038 aa9.16□□□□□ -0.94
NUP43-206ENST00000543637 KIAA2012Q0VF49 1180 aa9.16□□□□□ -0.94
NUP43-206ENST00000543637 PI4KAP1Q8N8J0 262 aa9.16□□□□□ -0.94
NUP43-206ENST00000543637 JMYQ8N9B5 988 aa9.16□□□□□ -0.94
NUP43-206ENST00000543637 ZC3H12CQ9C0D7 883 aaKnown RBP9.16□□□□□ -0.94
NUP43-206ENST00000543637 ANKIB1Q9P2G1 1089 aa9.16□□□□□ -0.94
NUP43-206ENST00000543637 H7C1D1 291 aa9.15□□□□□ -0.94
NUP43-206ENST00000543637 EPS15P42566 896 aa9.15□□□□□ -0.94
NUP43-206ENST00000543637 CXCL9Q07325 125 aa9.15□□□□□ -0.94
NUP43-206ENST00000543637 MAP1SQ66K74 1059 aaPredicted RBP9.15□□□□□ -0.94
NUP43-206ENST00000543637 ANKRD18AQ8IVF6 992 aa9.15□□□□□ -0.94
NUP43-206ENST00000543637 CELF1Q92879 486 aaKnown RBP9.15□□□□□ -0.94
NUP43-206ENST00000543637 MYH16Q9H6N6 1097 aa9.15□□□□□ -0.94
NUP43-206ENST00000543637 ADARB2Q9NS39 739 aaKnown RBP9.15□□□□□ -0.94
NUP43-206ENST00000543637 TRPM7Q96QT4 1865 aa9.15□□□□□ -0.95
NUP43-206ENST00000543637 RAD17O75943 681 aa9.14□□□□□ -0.95
NUP43-206ENST00000543637 ITGBL1O95965 494 aaPredicted RBP9.14□□□□□ -0.95
NUP43-206ENST00000543637 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
NUP43-206ENST00000543637 DEFB115Q30KQ5 88 aa9.14□□□□□ -0.95
NUP43-206ENST00000543637 JARID2Q92833 1246 aaPredicted RBP9.14□□□□□ -0.95
NUP43-206ENST00000543637 CDC5LQ99459 802 aaKnown RBP9.14□□□□□ -0.95
NUP43-206ENST00000543637 GPRC5DQ9NZD1 345 aa9.14□□□□□ -0.95
NUP43-206ENST00000543637 SNED1Q8TER0 1413 aa9.14□□□□□ -0.95
NUP43-206ENST00000543637 CDHR2Q9BYE9 1310 aa9.13□□□□□ -0.95
NUP43-206ENST00000543637 GMPSP49915 693 aaPredicted RBP9.13□□□□□ -0.95
NUP43-206ENST00000543637 SCNN1DP51172 638 aa9.13□□□□□ -0.95
NUP43-206ENST00000543637 GPSM2P81274 684 aa9.13□□□□□ -0.95
NUP43-206ENST00000543637 EXOSC9Q06265 439 aaKnown RBP9.13□□□□□ -0.95
NUP43-206ENST00000543637 IFFO2Q5TF58 517 aa9.13□□□□□ -0.95
NUP43-206ENST00000543637 CCDC85AQ96PX6 553 aaPredicted RBP9.13□□□□□ -0.95
NUP43-206ENST00000543637 SEC31BQ9NQW1 1179 aa9.13□□□□□ -0.95
NUP43-206ENST00000543637 MKRN1Q9UHC7 482 aaKnown RBP9.13□□□□□ -0.95
NUP43-206ENST00000543637 CNOT7Q9UIV1 285 aaKnown RBP9.13□□□□□ -0.95
NUP43-206ENST00000543637 GGA1Q9UJY5 639 aa9.13□□□□□ -0.95
NUP43-206ENST00000543637 LRRC37AA6NMS7 1700 aa9.13□□□□□ -0.95
NUP43-206ENST00000543637 SPEF2Q9C093 1822 aa9.12□□□□□ -0.95
NUP43-206ENST00000543637 PASKQ96RG2 1323 aa9.12□□□□□ -0.95
NUP43-206ENST00000543637 VAMP4O75379 141 aa9.12□□□□□ -0.95
NUP43-206ENST00000543637 ATP2B4P23634 1241 aa9.12□□□□□ -0.95
NUP43-206ENST00000543637 FLIIQ13045 1269 aa9.12□□□□□ -0.95
NUP43-206ENST00000543637 DOK7Q18PE1 504 aa9.12□□□□□ -0.95
NUP43-206ENST00000543637 CWF19L2Q2TBE0 894 aaKnown RBP9.12□□□□□ -0.95
NUP43-206ENST00000543637 TBC1D16Q8TBP0 767 aa9.12□□□□□ -0.95
NUP43-206ENST00000543637 DNAAF4Q8WXU2 420 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms