RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 KSR2Q6VAB6 950 aa16.89■□□□□ 0.29
TNFRSF1A-215ENST00000543359 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
TNFRSF1A-215ENST00000543359 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.29
TNFRSF1A-215ENST00000543359 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
TNFRSF1A-215ENST00000543359 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
TNFRSF1A-215ENST00000543359 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
TNFRSF1A-215ENST00000543359 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-215ENST00000543359 LRRC37AA6NMS7 1700 aa16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 PCCAP05165 728 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 HTRA3P83110 453 aa16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 JDP2Q8WYK2 163 aa16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 VPS33BQ9H267 617 aa16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 TAF1DQ9H5J8 278 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 CWC25Q9NXE8 425 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
TNFRSF1A-215ENST00000543359 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
TNFRSF1A-215ENST00000543359 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-215ENST00000543359 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
TNFRSF1A-215ENST00000543359 GPC2Q8N158 579 aa16.86■□□□□ 0.29
TNFRSF1A-215ENST00000543359 LARGE2Q8N3Y3 721 aa16.86■□□□□ 0.29
TNFRSF1A-215ENST00000543359 JARID2Q92833 1246 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-215ENST00000543359 STK31Q9BXU1 1019 aa16.86■□□□□ 0.29
TNFRSF1A-215ENST00000543359 CACNA1FO60840 1977 aa16.86■□□□□ 0.29
TNFRSF1A-215ENST00000543359 IQCA1LA6NCM1 817 aa16.85■□□□□ 0.29
TNFRSF1A-215ENST00000543359 DPP8Q6V1X1 898 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-215ENST00000543359 MPNDQ8N594 471 aa16.85■□□□□ 0.29
TNFRSF1A-215ENST00000543359 PPIP5K2O43314 1243 aa16.84■□□□□ 0.29
TNFRSF1A-215ENST00000543359 AOC3Q16853 763 aa16.84■□□□□ 0.29
TNFRSF1A-215ENST00000543359 CHADLQ6NUI6 762 aa16.84■□□□□ 0.29
TNFRSF1A-215ENST00000543359 LTBP1Q14766 1721 aa16.84■□□□□ 0.29
TNFRSF1A-215ENST00000543359 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
TNFRSF1A-215ENST00000543359 EIF6P56537 245 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 RPS8P62241 208 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 KIAA2012Q0VF49 1180 aa16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 FLIIQ13045 1269 aa16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 CWF19L2Q2TBE0 894 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 SUPT20HQ8NEM7 779 aa16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 CDHR2Q9BYE9 1310 aa16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 SEC31BQ9NQW1 1179 aa16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 HACL1Q9UJ83 578 aa16.83■□□□□ 0.28
TNFRSF1A-215ENST00000543359 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
TNFRSF1A-215ENST00000543359 PDE8AO60658 829 aa16.82■□□□□ 0.28
TNFRSF1A-215ENST00000543359 SCNN1DP51172 638 aa16.82■□□□□ 0.28
TNFRSF1A-215ENST00000543359 CXCL9Q07325 125 aa16.82■□□□□ 0.28
TNFRSF1A-215ENST00000543359 NIM1KQ8IY84 436 aa16.82■□□□□ 0.28
TNFRSF1A-215ENST00000543359 ZNRF3Q9ULT6 936 aa16.82■□□□□ 0.28
TNFRSF1A-215ENST00000543359 H7C1W4 665 aa16.81■□□□□ 0.28
TNFRSF1A-215ENST00000543359 HSP90B1P14625 803 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-215ENST00000543359 EPHX2P34913 555 aa16.81■□□□□ 0.28
TNFRSF1A-215ENST00000543359 GPSM2P81274 684 aa16.81■□□□□ 0.28
TNFRSF1A-215ENST00000543359 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
TNFRSF1A-215ENST00000543359 POLLQ9UGP5 575 aa16.81■□□□□ 0.28
TNFRSF1A-215ENST00000543359 GJA3Q9Y6H8 435 aa16.81■□□□□ 0.28
TNFRSF1A-215ENST00000543359 PASKQ96RG2 1323 aa16.8■□□□□ 0.28
TNFRSF1A-215ENST00000543359 ITGBL1O95965 494 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-215ENST00000543359 CASP7P55210 303 aa16.8■□□□□ 0.28
TNFRSF1A-215ENST00000543359 KLRG1Q96E93 195 aa16.8■□□□□ 0.28
TNFRSF1A-215ENST00000543359 MYH16Q9H6N6 1097 aa16.8■□□□□ 0.28
TNFRSF1A-215ENST00000543359 YDJCA8MPS7 323 aa16.79■□□□□ 0.28
TNFRSF1A-215ENST00000543359 EPS15P42566 896 aa16.79■□□□□ 0.28
TNFRSF1A-215ENST00000543359 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
TNFRSF1A-215ENST00000543359 CCDC152Q4G0S7 254 aa16.79■□□□□ 0.28
TNFRSF1A-215ENST00000543359 TTLL11Q8NHH1 800 aa16.79■□□□□ 0.28
TNFRSF1A-215ENST00000543359 NSFL1CQ9UNZ2 370 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-215ENST00000543359 GCKRQ14397 625 aa16.78■□□□□ 0.28
TNFRSF1A-215ENST00000543359 PNMA8AQ86V59 439 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-215ENST00000543359 DNAAF4Q8WXU2 420 aa16.78■□□□□ 0.28
TNFRSF1A-215ENST00000543359 CCDC85AQ96PX6 553 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-215ENST00000543359 PODXL2Q9NZ53 605 aa16.78■□□□□ 0.28
TNFRSF1A-215ENST00000543359 MYH3P11055 1940 aa16.77■□□□□ 0.28
TNFRSF1A-215ENST00000543359 CTSWP56202 376 aa16.77■□□□□ 0.28
TNFRSF1A-215ENST00000543359 FKBP5Q13451 457 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-215ENST00000543359 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-215ENST00000543359 JMYQ8N9B5 988 aa16.77■□□□□ 0.28
TNFRSF1A-215ENST00000543359 TBC1D16Q8TBP0 767 aa16.77■□□□□ 0.28
TNFRSF1A-215ENST00000543359 PLA2G12BQ9BX93 195 aa16.77■□□□□ 0.28
TNFRSF1A-215ENST00000543359 RTL9Q8NET4 1388 aa16.77■□□□□ 0.27
TNFRSF1A-215ENST00000543359 WASHC4Q2M389 1173 aa16.76■□□□□ 0.27
TNFRSF1A-215ENST00000543359 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
TNFRSF1A-215ENST00000543359 LINS1Q8NG48 757 aa16.76■□□□□ 0.27
TNFRSF1A-215ENST00000543359 GREM2Q9H772 168 aa16.76■□□□□ 0.27
TNFRSF1A-215ENST00000543359 F6X3S4 739 aa16.75■□□□□ 0.27
TNFRSF1A-215ENST00000543359 RAD17O75943 681 aa16.75■□□□□ 0.27
TNFRSF1A-215ENST00000543359 BEND3Q5T5X7 828 aa16.75■□□□□ 0.27
TNFRSF1A-215ENST00000543359 CIAPIN1Q6FI81 312 aa16.75■□□□□ 0.27
TNFRSF1A-215ENST00000543359 GPR101Q96P66 508 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-215ENST00000543359 GPRC5DQ9NZD1 345 aa16.75■□□□□ 0.27
TNFRSF1A-215ENST00000543359 C6orf229H3BNL8 230 aa16.74■□□□□ 0.27
TNFRSF1A-215ENST00000543359 RIMBP2O15034 1052 aa16.74■□□□□ 0.27
TNFRSF1A-215ENST00000543359 CSF1RP07333 972 aa16.74■□□□□ 0.27
TNFRSF1A-215ENST00000543359 GMPSP49915 693 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-215ENST00000543359 MAP1SQ66K74 1059 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-215ENST00000543359 KCNQ5Q9NR82 932 aa16.74■□□□□ 0.27
TNFRSF1A-215ENST00000543359 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
TNFRSF1A-215ENST00000543359 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-215ENST00000543359 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
TNFRSF1A-215ENST00000543359 LMOD1P29536 600 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms