RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 ZNF428Q96B54 188 aa20.22■□□□□ 0.83
CSF1R-209ENST00000543093 GPRC5DQ9NZD1 345 aa20.22■□□□□ 0.83
CSF1R-209ENST00000543093 CHPF2Q9P2E5 772 aa20.22■□□□□ 0.83
CSF1R-209ENST00000543093 WDR33Q9C0J8 1336 aaKnown RBP20.22■□□□□ 0.83
CSF1R-209ENST00000543093 CXCL9Q07325 125 aa20.21■□□□□ 0.83
CSF1R-209ENST00000543093 RUNDC1Q96C34 613 aa20.21■□□□□ 0.83
CSF1R-209ENST00000543093 ADARB2Q9NS39 739 aaKnown RBP20.21■□□□□ 0.83
CSF1R-209ENST00000543093 TRIM35Q9UPQ4 493 aa20.21■□□□□ 0.83
CSF1R-209ENST00000543093 TRAF5O00463 557 aa20.2■□□□□ 0.82
CSF1R-209ENST00000543093 GRAPQ13588 217 aa20.2■□□□□ 0.82
CSF1R-209ENST00000543093 GRAPLQ8TC17 118 aaPredicted RBP20.2■□□□□ 0.82
CSF1R-209ENST00000543093 LRRC37AA6NMS7 1700 aa20.19■□□□□ 0.82
CSF1R-209ENST00000543093 GMPSP49915 693 aaPredicted RBP20.19■□□□□ 0.82
CSF1R-209ENST00000543093 LBX1P52954 281 aa20.19■□□□□ 0.82
CSF1R-209ENST00000543093 KIAA2012Q0VF49 1180 aa20.19■□□□□ 0.82
CSF1R-209ENST00000543093 HDGFL1Q5TGJ6 251 aa20.19■□□□□ 0.82
CSF1R-209ENST00000543093 PAXIP1Q6ZW49 1069 aaPredicted RBP20.19■□□□□ 0.82
CSF1R-209ENST00000543093 THSD7BQ9C0I4 1608 aa20.19■□□□□ 0.82
CSF1R-209ENST00000543093 DUOX1Q9NRD9 1551 aa20.18■□□□□ 0.82
CSF1R-209ENST00000543093 ZNF316A6NFI3 1004 aaPredicted RBP20.18■□□□□ 0.82
CSF1R-209ENST00000543093 CIAPIN1Q6FI81 312 aa20.18■□□□□ 0.82
CSF1R-209ENST00000543093 RAD17O75943 681 aa20.17■□□□□ 0.82
CSF1R-209ENST00000543093 MAP2K1Q02750 393 aaPredicted RBP20.17■□□□□ 0.82
CSF1R-209ENST00000543093 CST9Q5W186 159 aa20.17■□□□□ 0.82
CSF1R-209ENST00000543093 PLBD2Q8NHP8 589 aa20.17■□□□□ 0.82
CSF1R-209ENST00000543093 BCL2L13Q9BXK5 485 aa20.17■□□□□ 0.82
CSF1R-209ENST00000543093 HSPA8P11142 646 aaKnown RBP20.16■□□□□ 0.82
CSF1R-209ENST00000543093 GRM1Q13255 1194 aa20.16■□□□□ 0.82
CSF1R-209ENST00000543093 ANKRD13DQ6ZTN6 518 aa20.16■□□□□ 0.82
CSF1R-209ENST00000543093 CAPNS2Q96L46 248 aa20.16■□□□□ 0.82
CSF1R-209ENST00000543093 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
CSF1R-209ENST00000543093 ATP5J2-PTCD1G3V325 749 aa20.15■□□□□ 0.82
CSF1R-209ENST00000543093 HOXB7P09629 217 aa20.15■□□□□ 0.82
CSF1R-209ENST00000543093 ECE1P42892 770 aa20.15■□□□□ 0.82
CSF1R-209ENST00000543093 TNIP1Q15025 636 aa20.15■□□□□ 0.82
CSF1R-209ENST00000543093 CYP4F22Q6NT55 531 aa20.15■□□□□ 0.82
CSF1R-209ENST00000543093 TMC4Q7Z404 712 aa20.15■□□□□ 0.82
CSF1R-209ENST00000543093 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
CSF1R-209ENST00000543093 ISCA1Q9BUE6 129 aa20.15■□□□□ 0.82
CSF1R-209ENST00000543093 DBF4Q9UBU7 674 aaPredicted RBP20.15■□□□□ 0.82
CSF1R-209ENST00000543093 CDHR2Q9BYE9 1310 aa20.15■□□□□ 0.82
CSF1R-209ENST00000543093 TLL2Q9Y6L7 1015 aa20.14■□□□□ 0.81
CSF1R-209ENST00000543093 COL4A1P02462 1669 aa20.13■□□□□ 0.81
CSF1R-209ENST00000543093 YDJCA8MPS7 323 aa20.13■□□□□ 0.81
CSF1R-209ENST00000543093 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
CSF1R-209ENST00000543093 CELF1Q92879 486 aaKnown RBP20.13■□□□□ 0.81
CSF1R-209ENST00000543093 CFAP44Q96MT7 982 aa20.13■□□□□ 0.81
CSF1R-209ENST00000543093 GLIS2Q9BZE0 524 aaPredicted RBP20.13■□□□□ 0.81
CSF1R-209ENST00000543093 HYPKQ9NX55 129 aa20.13■□□□□ 0.81
CSF1R-209ENST00000543093 CELF2O95319 508 aaKnown RBP20.12■□□□□ 0.81
CSF1R-209ENST00000543093 SF3B3Q15393 1217 aaKnown RBP20.12■□□□□ 0.81
CSF1R-209ENST00000543093 RTL5Q5HYW3 569 aaPredicted RBP20.12■□□□□ 0.81
CSF1R-209ENST00000543093 GPR101Q96P66 508 aaPredicted RBP20.12■□□□□ 0.81
CSF1R-209ENST00000543093 CNOT7Q9UIV1 285 aaKnown RBP20.12■□□□□ 0.81
CSF1R-209ENST00000543093 SHTN1A0MZ66 631 aa20.11■□□□□ 0.81
CSF1R-209ENST00000543093 HIRAP54198 1017 aaPredicted RBP20.11■□□□□ 0.81
CSF1R-209ENST00000543093 WASHC4Q2M389 1173 aa20.11■□□□□ 0.81
CSF1R-209ENST00000543093 TRPM4Q8TD43 1214 aa20.11■□□□□ 0.81
CSF1R-209ENST00000543093 MBIPQ9NS73 344 aa20.11■□□□□ 0.81
CSF1R-209ENST00000543093 PGAP2Q9UHJ9 254 aa20.11■□□□□ 0.81
CSF1R-209ENST00000543093 NSFL1CQ9UNZ2 370 aaKnown RBP20.11■□□□□ 0.81
CSF1R-209ENST00000543093 ZC3H15Q8WU90 426 aaKnown RBP20.1■□□□□ 0.81
CSF1R-209ENST00000543093 BEGAINQ9BUH8 593 aa20.1■□□□□ 0.81
CSF1R-209ENST00000543093 C6orf229H3BNL8 230 aa20.09■□□□□ 0.81
CSF1R-209ENST00000543093 H7C1D1 291 aa20.09■□□□□ 0.81
CSF1R-209ENST00000543093 IRS4O14654 1257 aaPredicted RBP20.09■□□□□ 0.81
CSF1R-209ENST00000543093 RIMBP2O15034 1052 aa20.09■□□□□ 0.81
CSF1R-209ENST00000543093 GPSM2P81274 684 aa20.09■□□□□ 0.81
CSF1R-209ENST00000543093 SAPCD2Q86UD0 394 aa20.09■□□□□ 0.81
CSF1R-209ENST00000543093 ZNF408Q9H9D4 720 aa20.09■□□□□ 0.81
CSF1R-209ENST00000543093 DBNDD1Q9H9R9 158 aa20.09■□□□□ 0.81
CSF1R-209ENST00000543093 ZBTB12Q9Y330 459 aaPredicted RBP20.09■□□□□ 0.81
CSF1R-209ENST00000543093 AOC2O75106 756 aa20.08■□□□□ 0.81
CSF1R-209ENST00000543093 TRIM28Q13263 835 aaKnown RBP20.08■□□□□ 0.81
CSF1R-209ENST00000543093 RIC3Q7Z5B4 369 aa20.08■□□□□ 0.81
CSF1R-209ENST00000543093 MICALL2Q8IY33 904 aa20.08■□□□□ 0.81
CSF1R-209ENST00000543093 PSMD14O00487 310 aa20.07■□□□□ 0.8
CSF1R-209ENST00000543093 ZNF853P0CG23 659 aa20.07■□□□□ 0.8
CSF1R-209ENST00000543093 GOLGA2Q08379 1002 aa20.07■□□□□ 0.8
CSF1R-209ENST00000543093 CDC37L1Q7L3B6 337 aa20.07■□□□□ 0.8
CSF1R-209ENST00000543093 POLLQ9UGP5 575 aa20.07■□□□□ 0.8
CSF1R-209ENST00000543093 MAP2K2P36507 400 aa20.06■□□□□ 0.8
CSF1R-209ENST00000543093 PHAXQ9H814 394 aaKnown RBP20.06■□□□□ 0.8
CSF1R-209ENST00000543093 ELL2O00472 640 aaPredicted RBP20.05■□□□□ 0.8
CSF1R-209ENST00000543093 APAF1O14727 1248 aa20.05■□□□□ 0.8
CSF1R-209ENST00000543093 ANP32CO43423 234 aa20.05■□□□□ 0.8
CSF1R-209ENST00000543093 ECE2O60344 883 aa20.05■□□□□ 0.8
CSF1R-209ENST00000543093 RPS8P62241 208 aaKnown RBP20.05■□□□□ 0.8
CSF1R-209ENST00000543093 DOK7Q18PE1 504 aa20.05■□□□□ 0.8
CSF1R-209ENST00000543093 SAMD7Q7Z3H4 446 aa20.05■□□□□ 0.8
CSF1R-209ENST00000543093 USP48Q86UV5 1035 aa20.05■□□□□ 0.8
CSF1R-209ENST00000543093 ZBTB38Q8NAP3 1195 aaPredicted RBP20.05■□□□□ 0.8
CSF1R-209ENST00000543093 DPF2Q92785 391 aa20.05■□□□□ 0.8
CSF1R-209ENST00000543093 EYA3Q99504 573 aa20.05■□□□□ 0.8
CSF1R-209ENST00000543093 IFT57Q9NWB7 429 aa20.05■□□□□ 0.8
CSF1R-209ENST00000543093 POLR2AP24928 1970 aaKnown RBP20.04■□□□□ 0.8
CSF1R-209ENST00000543093 TBC1D10BQ4KMP7 808 aaPredicted RBP20.04■□□□□ 0.8
CSF1R-209ENST00000543093 TBC1D16Q8TBP0 767 aa20.04■□□□□ 0.8
CSF1R-209ENST00000543093 ABHD8Q96I13 439 aa20.04■□□□□ 0.8
CSF1R-209ENST00000543093 HHIPL1Q96JK4 782 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms