RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 RPS12P25398 132 aaKnown RBP6.54□□□□□ -1.36
ZEB1-208ENST00000542815 SF3B3Q15393 1217 aaKnown RBP6.54□□□□□ -1.36
ZEB1-208ENST00000542815 ERFEQ4G0M1 354 aa6.54□□□□□ -1.36
ZEB1-208ENST00000542815 DDRGK1Q96HY6 314 aa6.54□□□□□ -1.36
ZEB1-208ENST00000542815 ZNF853P0CG23 659 aa6.53□□□□□ -1.36
ZEB1-208ENST00000542815 MAP2K1Q02750 393 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-208ENST00000542815 DPF2Q92785 391 aa6.53□□□□□ -1.36
ZEB1-208ENST00000542815 SCNN1DP51172 638 aa6.53□□□□□ -1.36
ZEB1-208ENST00000542815 BRPF1P55201 1214 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-208ENST00000542815 SYNE4Q8N205 404 aa6.53□□□□□ -1.36
ZEB1-208ENST00000542815 ISCA1Q9BUE6 129 aa6.53□□□□□ -1.36
ZEB1-208ENST00000542815 CHL1O00533 1208 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 KCNQ3O43525 872 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 C21orf2O43822 256 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 CANXP27824 592 aaKnown RBP6.52□□□□□ -1.37
ZEB1-208ENST00000542815 EPHX2P34913 555 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 NBPF5PQ86XG9 351 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-208ENST00000542815 NGEFQ8N5V2 710 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 PCDH10Q9P2E7 1040 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 KIAA2012Q0VF49 1180 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 AAMPQ13685 434 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 COL13A1Q5TAT6 717 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-208ENST00000542815 CENPQQ7L2Z9 268 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-208ENST00000542815 PPP1R42Q7Z4L9 355 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 ADARB2Q9NS39 739 aaKnown RBP6.52□□□□□ -1.37
ZEB1-208ENST00000542815 ECE1P42892 770 aa6.52□□□□□ -1.37
ZEB1-208ENST00000542815 TNNT2P45379 298 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-208ENST00000542815 PPEF1O14829 653 aaPredicted RBP6.51□□□□□ -1.37
ZEB1-208ENST00000542815 DUSP27Q5VZP5 1158 aa6.51□□□□□ -1.37
ZEB1-208ENST00000542815 RTF1Q92541 710 aaKnown RBP6.51□□□□□ -1.37
ZEB1-208ENST00000542815 CHMP4AQ9BY43 222 aa6.51□□□□□ -1.37
ZEB1-208ENST00000542815 GPRC5DQ9NZD1 345 aa6.51□□□□□ -1.37
ZEB1-208ENST00000542815 FKBP1BP68106 108 aa6.51□□□□□ -1.37
ZEB1-208ENST00000542815 HLFQ16534 295 aa6.51□□□□□ -1.37
ZEB1-208ENST00000542815 KIF6Q6ZMV9 814 aa6.51□□□□□ -1.37
ZEB1-208ENST00000542815 DDX21Q9NR30 783 aaKnown RBP eCLIP6.51□□□□□ -1.37
ZEB1-208ENST00000542815 ABCC4O15439 1325 aa6.51□□□□□ -1.37
ZEB1-208ENST00000542815 WDR33Q9C0J8 1336 aaKnown RBP6.51□□□□□ -1.37
ZEB1-208ENST00000542815 APAF1O14727 1248 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 ZNF280AP59817 542 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-208ENST00000542815 C15orf52Q6ZUT6 534 aaKnown RBP6.5□□□□□ -1.37
ZEB1-208ENST00000542815 POLR2AP24928 1970 aaKnown RBP6.5□□□□□ -1.37
ZEB1-208ENST00000542815 FOXN1O15353 648 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 VEGFBP49765 207 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 SLFN5Q08AF3 891 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 GRAPQ13588 217 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 CCDC27Q2M243 656 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 TNS4Q8IZW8 715 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 GRAPLQ8TC17 118 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-208ENST00000542815 ZNF526Q8TF50 670 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-208ENST00000542815 ZNRF3Q9ULT6 936 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 TBC1D2BQ9UPU7 963 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 NIP7Q9Y221 180 aaKnown RBP eCLIP6.5□□□□□ -1.37
ZEB1-208ENST00000542815 E9PSI1 815 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 DDNO94850 711 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-208ENST00000542815 NEFMP07197 916 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 C20orf194Q5TEA3 1177 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 SUSD4Q5VX71 490 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 CCDC146Q8IYE0 955 aa6.5□□□□□ -1.37
ZEB1-208ENST00000542815 MYH13Q9UKX3 1938 aa6.49□□□□□ -1.37
ZEB1-208ENST00000542815 TULP1O00294 542 aaPredicted RBP6.49□□□□□ -1.37
ZEB1-208ENST00000542815 HSP90B1P14625 803 aaKnown RBP6.49□□□□□ -1.37
ZEB1-208ENST00000542815 FKBP1AP62942 108 aaKnown RBP6.49□□□□□ -1.37
ZEB1-208ENST00000542815 RBM10P98175 930 aaKnown RBP6.49□□□□□ -1.37
ZEB1-208ENST00000542815 TCIRG1Q13488 830 aa6.49□□□□□ -1.37
ZEB1-208ENST00000542815 NLRP10Q86W26 655 aa6.49□□□□□ -1.37
ZEB1-208ENST00000542815 PLBD2Q8NHP8 589 aa6.49□□□□□ -1.37
ZEB1-208ENST00000542815 IL16Q14005 1332 aa6.49□□□□□ -1.37
ZEB1-208ENST00000542815 IRS2Q9Y4H2 1338 aa6.49□□□□□ -1.37
ZEB1-208ENST00000542815 EIF6P56537 245 aaKnown RBP6.49□□□□□ -1.37
ZEB1-208ENST00000542815 TNIP1Q15025 636 aa6.49□□□□□ -1.37
ZEB1-208ENST00000542815 ZNF622Q969S3 477 aaKnown RBP eCLIP6.49□□□□□ -1.37
ZEB1-208ENST00000542815 UTP14AQ9BVJ6 771 aaKnown RBP6.49□□□□□ -1.37
ZEB1-208ENST00000542815 PLA2G12BQ9BX93 195 aa6.49□□□□□ -1.37
ZEB1-208ENST00000542815 MED23Q9ULK4 1368 aa6.49□□□□□ -1.37
ZEB1-208ENST00000542815 FAM155AB1AL88 458 aaPredicted RBP6.48□□□□□ -1.37
ZEB1-208ENST00000542815 CNTROBQ8N137 903 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 WWC3Q9ULE0 1092 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 PRAMEF22A3QJZ6 481 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 FAM161AQ3B820 660 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 HOMEZQ8IX15 550 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 LAS1LQ9Y4W2 734 aaKnown RBP6.48□□□□□ -1.37
ZEB1-208ENST00000542815 FOCADQ5VW36 1801 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 CAPN2P17655 700 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 MAPK8IP2Q13387 824 aaPredicted RBP6.48□□□□□ -1.37
ZEB1-208ENST00000542815 DEFB115Q30KQ5 88 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 CST9Q5W186 159 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 GMLQ99445 158 aa6.48□□□□□ -1.37
ZEB1-208ENST00000542815 MAST2Q6P0Q8 1798 aa6.47□□□□□ -1.37
ZEB1-208ENST00000542815 VIL1P09327 827 aaKnown RBP6.47□□□□□ -1.37
ZEB1-208ENST00000542815 TMPOP42166 694 aaKnown RBP6.47□□□□□ -1.37
ZEB1-208ENST00000542815 MCM10Q7L590 875 aa6.47□□□□□ -1.37
ZEB1-208ENST00000542815 ZBED3Q96IU2 234 aaPredicted RBP6.47□□□□□ -1.37
ZEB1-208ENST00000542815 TRIM35Q9UPQ4 493 aa6.47□□□□□ -1.37
ZEB1-208ENST00000542815 ZNF521Q96K83 1311 aa6.47□□□□□ -1.37
ZEB1-208ENST00000542815 RGS3P49796 1198 aa6.47□□□□□ -1.37
ZEB1-208ENST00000542815 MTMR14Q8NCE2 650 aa6.47□□□□□ -1.37
ZEB1-208ENST00000542815 AGBL3Q8NEM8 1001 aa6.47□□□□□ -1.37
ZEB1-208ENST00000542815 HYPKQ9NX55 129 aa6.47□□□□□ -1.37
ZEB1-208ENST00000542815 U2SURPO15042 1029 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms