RNA–Protein interactions for RNA: ENST00000542766.5

IFT43-203, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-203ENST00000542766 GRAPLQ8TC17 118 aaPredicted RBP27.04■■□□□ 1.92
IFT43-203ENST00000542766 HYPKQ9NX55 129 aa27.04■■□□□ 1.92
IFT43-203ENST00000542766 ELL2O00472 640 aaPredicted RBP27.03■■□□□ 1.92
IFT43-203ENST00000542766 DDX46Q7L014 1031 aaKnown RBP27.03■■□□□ 1.92
IFT43-203ENST00000542766 PHAXQ9H814 394 aaKnown RBP27.03■■□□□ 1.92
IFT43-203ENST00000542766 IFT57Q9NWB7 429 aa27.03■■□□□ 1.92
IFT43-203ENST00000542766 TMEM88BA6NKF7 163 aa27.02■■□□□ 1.92
IFT43-203ENST00000542766 FMR1Q06787 632 aaKnown RBP eCLIP27.02■■□□□ 1.92
IFT43-203ENST00000542766 RTL5Q5HYW3 569 aaPredicted RBP27.02■■□□□ 1.92
IFT43-203ENST00000542766 DPP8Q6V1X1 898 aaPredicted RBP27.02■■□□□ 1.92
IFT43-203ENST00000542766 MPNDQ8N594 471 aa27.02■■□□□ 1.92
IFT43-203ENST00000542766 CXCL9Q07325 125 aa27.01■■□□□ 1.91
IFT43-203ENST00000542766 TMX4Q9H1E5 349 aaPredicted RBP27.01■■□□□ 1.91
IFT43-203ENST00000542766 VPS33BQ9H267 617 aa27.01■■□□□ 1.91
IFT43-203ENST00000542766 LMOD1P29536 600 aaPredicted RBP27■■□□□ 1.91
IFT43-203ENST00000542766 C8orf58Q8NAV2 365 aa27■■□□□ 1.91
IFT43-203ENST00000542766 CELF1Q92879 486 aaKnown RBP27■■□□□ 1.91
IFT43-203ENST00000542766 ZNRF3Q9ULT6 936 aa27■■□□□ 1.91
IFT43-203ENST00000542766 GNAI1P63096 354 aa26.99■■□□□ 1.91
IFT43-203ENST00000542766 KIAA2012Q0VF49 1180 aa26.99■■□□□ 1.91
IFT43-203ENST00000542766 SF3B3Q15393 1217 aaKnown RBP26.99■■□□□ 1.91
IFT43-203ENST00000542766 SUPT20HQ8NEM7 779 aa26.99■■□□□ 1.91
IFT43-203ENST00000542766 VEGFBP49765 207 aa26.98■■□□□ 1.91
IFT43-203ENST00000542766 TRIM28Q13263 835 aaKnown RBP26.98■■□□□ 1.91
IFT43-203ENST00000542766 POLR2AP24928 1970 aaKnown RBP26.98■■□□□ 1.91
IFT43-203ENST00000542766 GPRC5DQ9NZD1 345 aa26.97■■□□□ 1.91
IFT43-203ENST00000542766 YDJCA8MPS7 323 aa26.96■■□□□ 1.91
IFT43-203ENST00000542766 SCN9AQ15858 1988 aa26.96■■□□□ 1.91
IFT43-203ENST00000542766 USP50Q70EL3 339 aaPredicted RBP26.95■■□□□ 1.9
IFT43-203ENST00000542766 RIC3Q7Z5B4 369 aa26.95■■□□□ 1.9
IFT43-203ENST00000542766 IRS4O14654 1257 aaPredicted RBP26.94■■□□□ 1.9
IFT43-203ENST00000542766 RAD17O75943 681 aa26.94■■□□□ 1.9
IFT43-203ENST00000542766 GMPSP49915 693 aaPredicted RBP26.94■■□□□ 1.9
IFT43-203ENST00000542766 TSPYL6Q8N831 410 aa26.94■■□□□ 1.9
IFT43-203ENST00000542766 MYH3P11055 1940 aa26.94■■□□□ 1.9
IFT43-203ENST00000542766 TRAF5O00463 557 aa26.93■■□□□ 1.9
IFT43-203ENST00000542766 CALD1Q05682 793 aaKnown RBP26.93■■□□□ 1.9
IFT43-203ENST00000542766 CIAPIN1Q6FI81 312 aa26.93■■□□□ 1.9
IFT43-203ENST00000542766 TMC4Q7Z404 712 aa26.93■■□□□ 1.9
IFT43-203ENST00000542766 MYD88Q99836 296 aa26.93■■□□□ 1.9
IFT43-203ENST00000542766 SHTN1A0MZ66 631 aa26.92■■□□□ 1.9
IFT43-203ENST00000542766 RASSF10A6NK89 507 aa26.92■■□□□ 1.9
IFT43-203ENST00000542766 GOLGA2Q08379 1002 aa26.92■■□□□ 1.9
IFT43-203ENST00000542766 TNS4Q8IZW8 715 aa26.92■■□□□ 1.9
IFT43-203ENST00000542766 ADARB2Q9NS39 739 aaKnown RBP26.92■■□□□ 1.9
IFT43-203ENST00000542766 FOXN1O15353 648 aa26.91■■□□□ 1.9
IFT43-203ENST00000542766 GPSM2P81274 684 aa26.91■■□□□ 1.9
IFT43-203ENST00000542766 JARID2Q92833 1246 aaPredicted RBP26.91■■□□□ 1.9
IFT43-203ENST00000542766 SPEF2Q9C093 1822 aa26.9■■□□□ 1.9
IFT43-203ENST00000542766 ZBTB38Q8NAP3 1195 aaPredicted RBP26.9■■□□□ 1.9
IFT43-203ENST00000542766 TSR2Q969E8 191 aaKnown RBP26.9■■□□□ 1.9
IFT43-203ENST00000542766 SEC31BQ9NQW1 1179 aa26.9■■□□□ 1.9
IFT43-203ENST00000542766 POLLQ9UGP5 575 aa26.9■■□□□ 1.9
IFT43-203ENST00000542766 NSFL1CQ9UNZ2 370 aaKnown RBP26.9■■□□□ 1.9
IFT43-203ENST00000542766 HIRAP54198 1017 aaPredicted RBP26.89■■□□□ 1.9
IFT43-203ENST00000542766 DEFB115Q30KQ5 88 aa26.89■■□□□ 1.9
IFT43-203ENST00000542766 GPR101Q96P66 508 aaPredicted RBP26.89■■□□□ 1.9
IFT43-203ENST00000542766 THSD7BQ9C0I4 1608 aa26.88■■□□□ 1.89
IFT43-203ENST00000542766 CST9Q5W186 159 aa26.88■■□□□ 1.89
IFT43-203ENST00000542766 ABT1Q9ULW3 272 aaKnown RBP26.88■■□□□ 1.89
IFT43-203ENST00000542766 RIMBP2O15034 1052 aa26.87■■□□□ 1.89
IFT43-203ENST00000542766 RPS8P62241 208 aaKnown RBP26.87■■□□□ 1.89
IFT43-203ENST00000542766 WASHC4Q2M389 1173 aa26.87■■□□□ 1.89
IFT43-203ENST00000542766 TRPM4Q8TD43 1214 aa26.87■■□□□ 1.89
IFT43-203ENST00000542766 DBNDD1Q9H9R9 158 aa26.87■■□□□ 1.89
IFT43-203ENST00000542766 PSME4Q14997 1843 aa26.87■■□□□ 1.89
IFT43-203ENST00000542766 CACNA1FO60840 1977 aa26.86■■□□□ 1.89
IFT43-203ENST00000542766 TNIP1Q15025 636 aa26.86■■□□□ 1.89
IFT43-203ENST00000542766 CCDC191Q8NCU4 936 aa26.86■■□□□ 1.89
IFT43-203ENST00000542766 METTL22Q9BUU2 404 aaPredicted RBP26.86■■□□□ 1.89
IFT43-203ENST00000542766 BCL2L13Q9BXK5 485 aa26.86■■□□□ 1.89
IFT43-203ENST00000542766 KCNQ5Q9NR82 932 aa26.86■■□□□ 1.89
IFT43-203ENST00000542766 ZBTB12Q9Y330 459 aaPredicted RBP26.86■■□□□ 1.89
IFT43-203ENST00000542766 CDHR2Q9BYE9 1310 aa26.86■■□□□ 1.89
IFT43-203ENST00000542766 PCCAP05165 728 aaPredicted RBP26.85■■□□□ 1.89
IFT43-203ENST00000542766 CCDC30Q5VVM6 783 aa26.85■■□□□ 1.89
IFT43-203ENST00000542766 WDR33Q9C0J8 1336 aaKnown RBP26.85■■□□□ 1.89
IFT43-203ENST00000542766 C6orf229H3BNL8 230 aa26.84■■□□□ 1.89
IFT43-203ENST00000542766 PSMD14O00487 310 aa26.84■■□□□ 1.89
IFT43-203ENST00000542766 CAPN15O75808 1086 aa26.84■■□□□ 1.89
IFT43-203ENST00000542766 WWC1Q8IX03 1113 aa26.84■■□□□ 1.89
IFT43-203ENST00000542766 TBC1D16Q8TBP0 767 aa26.84■■□□□ 1.89
IFT43-203ENST00000542766 CCDC85AQ96PX6 553 aaPredicted RBP26.84■■□□□ 1.89
IFT43-203ENST00000542766 GLIS2Q9BZE0 524 aaPredicted RBP26.84■■□□□ 1.89
IFT43-203ENST00000542766 WBP1LQ9NX94 342 aa26.84■■□□□ 1.89
IFT43-203ENST00000542766 PGAP2Q9UHJ9 254 aa26.84■■□□□ 1.89
IFT43-203ENST00000542766 CNOT7Q9UIV1 285 aaKnown RBP26.84■■□□□ 1.89
IFT43-203ENST00000542766 MAP3K2Q9Y2U5 619 aa26.84■■□□□ 1.89
IFT43-203ENST00000542766 RTL9Q8NET4 1388 aa26.84■■□□□ 1.89
IFT43-203ENST00000542766 CCDC27Q2M243 656 aa26.83■■□□□ 1.89
IFT43-203ENST00000542766 CWC25Q9NXE8 425 aaPredicted RBP26.83■■□□□ 1.89
IFT43-203ENST00000542766 IGKV5-2P06315 115 aa26.82■■□□□ 1.88
IFT43-203ENST00000542766 DOK7Q18PE1 504 aa26.82■■□□□ 1.88
IFT43-203ENST00000542766 PI4KAP2A4QPH2 592 aa26.81■■□□□ 1.88
IFT43-203ENST00000542766 ECE2O60344 883 aa26.81■■□□□ 1.88
IFT43-203ENST00000542766 PDE8AO60658 829 aa26.81■■□□□ 1.88
IFT43-203ENST00000542766 G2E3Q7L622 706 aa26.81■■□□□ 1.88
IFT43-203ENST00000542766 MICALL2Q8IY33 904 aa26.81■■□□□ 1.88
IFT43-203ENST00000542766 PI4KAP1Q8N8J0 262 aa26.81■■□□□ 1.88
IFT43-203ENST00000542766 DDX58O95786 925 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms