RNA–Protein interactions for RNA: ENST00000542335.5

PDE1B-204, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,782 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-204ENST00000542335 SHANK3Q9BYB0 1731 aa14.36□□□□□ -0.11
PDE1B-204ENST00000542335 ATP5J2-PTCD1G3V325 749 aa14.36□□□□□ -0.11
PDE1B-204ENST00000542335 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.36□□□□□ -0.11
PDE1B-204ENST00000542335 C8orf37Q96NL8 207 aa14.36□□□□□ -0.11
PDE1B-204ENST00000542335 CCDC171Q6TFL3 1326 aa14.36□□□□□ -0.11
PDE1B-204ENST00000542335 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
PDE1B-204ENST00000542335 ZHX1Q9UKY1 873 aaPredicted RBP14.35□□□□□ -0.11
PDE1B-204ENST00000542335 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.35□□□□□ -0.11
PDE1B-204ENST00000542335 NBPF26B4DH59 902 aa14.35□□□□□ -0.11
PDE1B-204ENST00000542335 NBPF14Q5TI25 921 aa14.35□□□□□ -0.11
PDE1B-204ENST00000542335 VPS53Q5VIR6 699 aa14.35□□□□□ -0.11
PDE1B-204ENST00000542335 NBPF10Q6P3W6 841 aaKnown RBP14.35□□□□□ -0.11
PDE1B-204ENST00000542335 RUFY3Q7L099 469 aa14.35□□□□□ -0.11
PDE1B-204ENST00000542335 NBPF15Q8N660 670 aa14.35□□□□□ -0.11
PDE1B-204ENST00000542335 TMEM63CQ9P1W3 806 aa14.35□□□□□ -0.11
PDE1B-204ENST00000542335 JCADQ9P266 1359 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 PTH1RQ03431 593 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 NECTIN1Q15223 517 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 LRSAM1Q6UWE0 723 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 TMEM87AQ8NBN3 555 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 ZSWIM6Q9HCJ5 1215 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 COPRSQ9NQ92 184 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 COL22A1Q8NFW1 1626 aaPredicted RBP14.34□□□□□ -0.11
PDE1B-204ENST00000542335 NGLY1Q96IV0 654 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.34□□□□□ -0.11
PDE1B-204ENST00000542335 TJP1Q07157 1748 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 UQCRHLA0A096LP55 91 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 UQCRHP07919 91 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 CASTP20810 708 aaKnown RBP14.34□□□□□ -0.11
PDE1B-204ENST00000542335 DDB1Q16531 1140 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 FOXD4L5Q5VV16 416 aaPredicted RBP14.34□□□□□ -0.11
PDE1B-204ENST00000542335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDE1B-204ENST00000542335 FOXD4L4Q8WXT5 416 aaPredicted RBP14.34□□□□□ -0.11
PDE1B-204ENST00000542335 ACSBG1Q96GR2 724 aa14.34□□□□□ -0.11
PDE1B-204ENST00000542335 RFX7Q2KHR2 1363 aa14.33□□□□□ -0.12
PDE1B-204ENST00000542335 PRIM1P49642 420 aaKnown RBP14.33□□□□□ -0.12
PDE1B-204ENST00000542335 RABL6Q3YEC7 729 aaPredicted RBP14.33□□□□□ -0.12
PDE1B-204ENST00000542335 TTLL7Q6ZT98 887 aa14.33□□□□□ -0.12
PDE1B-204ENST00000542335 ZSCAN31Q96LW9 406 aaPredicted RBP14.33□□□□□ -0.12
PDE1B-204ENST00000542335 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.12
PDE1B-204ENST00000542335 SPATA31A1Q5TZJ5 1347 aa14.33□□□□□ -0.12
PDE1B-204ENST00000542335 MED23Q9ULK4 1368 aa14.33□□□□□ -0.12
PDE1B-204ENST00000542335 VGLL3A8MV65 326 aa14.33□□□□□ -0.12
PDE1B-204ENST00000542335 SMAP1Q8IYB5 467 aaPredicted RBP14.33□□□□□ -0.12
PDE1B-204ENST00000542335 MAP4K1Q92918 833 aa14.33□□□□□ -0.12
PDE1B-204ENST00000542335 ZBTB3Q9H5J0 574 aa14.33□□□□□ -0.12
PDE1B-204ENST00000542335 SH2B1Q9NRF2 756 aaPredicted RBP14.33□□□□□ -0.12
PDE1B-204ENST00000542335 NSFL1CQ9UNZ2 370 aaKnown RBP14.33□□□□□ -0.12
PDE1B-204ENST00000542335 NMIQ13287 307 aaPredicted RBP14.32□□□□□ -0.12
PDE1B-204ENST00000542335 EPHA10Q5JZY3 1008 aa14.32□□□□□ -0.12
PDE1B-204ENST00000542335 PRPF40BQ6NWY9 871 aaKnown RBP14.32□□□□□ -0.12
PDE1B-204ENST00000542335 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
PDE1B-204ENST00000542335 CCDC8Q9H0W5 538 aaPredicted RBP14.32□□□□□ -0.12
PDE1B-204ENST00000542335 ATG3Q9NT62 314 aa14.32□□□□□ -0.12
PDE1B-204ENST00000542335 CYP46A1Q9Y6A2 500 aa14.32□□□□□ -0.12
PDE1B-204ENST00000542335 PLCH1Q4KWH8 1693 aa14.32□□□□□ -0.12
PDE1B-204ENST00000542335 TOGARAM1Q9Y4F4 1720 aa14.32□□□□□ -0.12
PDE1B-204ENST00000542335 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
PDE1B-204ENST00000542335 SYAP1Q96A49 352 aaPredicted RBP14.32□□□□□ -0.12
PDE1B-204ENST00000542335 JAKMIP1Q96N16 626 aaKnown RBP14.32□□□□□ -0.12
PDE1B-204ENST00000542335 PRDM10Q9NQV6 1147 aa14.32□□□□□ -0.12
PDE1B-204ENST00000542335 TLR7Q9NYK1 1049 aaKnown RBP14.32□□□□□ -0.12
PDE1B-204ENST00000542335 ZSCAN22P10073 491 aaPredicted RBP14.31□□□□□ -0.12
PDE1B-204ENST00000542335 ZKSCAN1P17029 563 aaPredicted RBP14.31□□□□□ -0.12
PDE1B-204ENST00000542335 PDRG1Q9NUG6 133 aa14.31□□□□□ -0.12
PDE1B-204ENST00000542335 RBM8AQ9Y5S9 174 aaKnown RBP14.31□□□□□ -0.12
PDE1B-204ENST00000542335 DISP2A7MBM2 1401 aa14.31□□□□□ -0.12
PDE1B-204ENST00000542335 SIL1Q9H173 461 aa14.31□□□□□ -0.12
PDE1B-204ENST00000542335 ADCK5Q3MIX3 580 aa14.3□□□□□ -0.12
PDE1B-204ENST00000542335 CREB3L3Q68CJ9 461 aa14.3□□□□□ -0.12
PDE1B-204ENST00000542335 UBE3BQ7Z3V4 1068 aa14.3□□□□□ -0.12
PDE1B-204ENST00000542335 FAM227BQ96M60 508 aa14.3□□□□□ -0.12
PDE1B-204ENST00000542335 NOL7Q9UMY1 257 aaKnown RBP14.3□□□□□ -0.12
PDE1B-204ENST00000542335 SMC3Q9UQE7 1217 aa14.3□□□□□ -0.12
PDE1B-204ENST00000542335 KCPQ6ZWJ8 1503 aa14.3□□□□□ -0.12
PDE1B-204ENST00000542335 STX6O43752 255 aa14.3□□□□□ -0.12
PDE1B-204ENST00000542335 FAM98CQ17RN3 349 aaKnown RBP14.3□□□□□ -0.12
PDE1B-204ENST00000542335 PLBD2Q8NHP8 589 aa14.3□□□□□ -0.12
PDE1B-204ENST00000542335 PDLIM2Q96JY6 352 aa14.3□□□□□ -0.12
PDE1B-204ENST00000542335 SYCE3A1L190 88 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 ATP5JP18859 108 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 SYT1P21579 422 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 CASP7P55210 303 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 PTPN12Q05209 780 aaKnown RBP14.29□□□□□ -0.12
PDE1B-204ENST00000542335 HS1BP3Q53T59 392 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 FSD1Q9BTV5 496 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 ALDH8A1Q9H2A2 487 aaPredicted RBP14.29□□□□□ -0.12
PDE1B-204ENST00000542335 LARGE1O95461 756 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 PSMA5P28066 241 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 KLHDC4Q8TBB5 520 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 BOLA2Q9H3K6 86 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
PDE1B-204ENST00000542335 SPATA31A5Q5VU36 1347 aa14.28□□□□□ -0.12
PDE1B-204ENST00000542335 SPATA31A7Q8IWB4 1347 aa14.28□□□□□ -0.12
PDE1B-204ENST00000542335 A0A087WZG4 1122 aa14.28□□□□□ -0.12
PDE1B-204ENST00000542335 A0A0D9SFI3 127 aa14.28□□□□□ -0.12
PDE1B-204ENST00000542335 SLC27A2O14975 620 aa14.28□□□□□ -0.12
PDE1B-204ENST00000542335 PHF14O94880 888 aa14.28□□□□□ -0.12
PDE1B-204ENST00000542335 CPA1P15085 419 aa14.28□□□□□ -0.12
PDE1B-204ENST00000542335 RNF20Q5VTR2 975 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms