RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 GJA3Q9Y6H8 435 aa22.41■■□□□ 1.18
TRPT1-212ENST00000542040 ZNF541Q9H0D2 1346 aa22.4■■□□□ 1.18
TRPT1-212ENST00000542040 EPHX2P34913 555 aa22.4■■□□□ 1.18
TRPT1-212ENST00000542040 TWISTNBQ3B726 338 aaPredicted RBP22.4■■□□□ 1.18
TRPT1-212ENST00000542040 EAPPQ56P03 285 aaPredicted RBP22.4■■□□□ 1.18
TRPT1-212ENST00000542040 RTFDC1Q9BY42 306 aaPredicted RBP22.4■■□□□ 1.18
TRPT1-212ENST00000542040 METTL22Q9BUU2 404 aaPredicted RBP22.39■■□□□ 1.17
TRPT1-212ENST00000542040 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
TRPT1-212ENST00000542040 CCDC152Q4G0S7 254 aa22.38■■□□□ 1.17
TRPT1-212ENST00000542040 KSR2Q6VAB6 950 aa22.38■■□□□ 1.17
TRPT1-212ENST00000542040 TSR2Q969E8 191 aaKnown RBP22.38■■□□□ 1.17
TRPT1-212ENST00000542040 ZNRF3Q9ULT6 936 aa22.38■■□□□ 1.17
TRPT1-212ENST00000542040 PCCAP05165 728 aaPredicted RBP22.37■■□□□ 1.17
TRPT1-212ENST00000542040 TNIP1Q15025 636 aa22.37■■□□□ 1.17
TRPT1-212ENST00000542040 AOC3Q16853 763 aa22.37■■□□□ 1.17
TRPT1-212ENST00000542040 EYA3Q99504 573 aa22.37■■□□□ 1.17
TRPT1-212ENST00000542040 PDE8AO60658 829 aa22.36■■□□□ 1.17
TRPT1-212ENST00000542040 RTL5Q5HYW3 569 aaPredicted RBP22.36■■□□□ 1.17
TRPT1-212ENST00000542040 MAP3K2Q9Y2U5 619 aa22.36■■□□□ 1.17
TRPT1-212ENST00000542040 SNED1Q8TER0 1413 aa22.36■■□□□ 1.17
TRPT1-212ENST00000542040 SLC4A2P04920 1241 aa22.35■■□□□ 1.17
TRPT1-212ENST00000542040 RPS8P62241 208 aaKnown RBP22.35■■□□□ 1.17
TRPT1-212ENST00000542040 KIAA2012Q0VF49 1180 aa22.35■■□□□ 1.17
TRPT1-212ENST00000542040 TSPYL6Q8N831 410 aa22.35■■□□□ 1.17
TRPT1-212ENST00000542040 MYH16Q9H6N6 1097 aa22.35■■□□□ 1.17
TRPT1-212ENST00000542040 CREBZFQ9NS37 354 aa22.35■■□□□ 1.17
TRPT1-212ENST00000542040 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
TRPT1-212ENST00000542040 SCN4AP35499 1836 aa22.35■■□□□ 1.17
TRPT1-212ENST00000542040 WASHC4Q2M389 1173 aa22.34■■□□□ 1.17
TRPT1-212ENST00000542040 FAM9BQ8IZU0 186 aa22.34■■□□□ 1.17
TRPT1-212ENST00000542040 PI4KAP2A4QPH2 592 aa22.33■■□□□ 1.17
TRPT1-212ENST00000542040 USP50Q70EL3 339 aaPredicted RBP22.33■■□□□ 1.17
TRPT1-212ENST00000542040 PI4KAP1Q8N8J0 262 aa22.33■■□□□ 1.17
TRPT1-212ENST00000542040 SALL2Q9Y467 1007 aaPredicted RBP22.33■■□□□ 1.17
TRPT1-212ENST00000542040 G3V3G9 751 aa22.32■■□□□ 1.16
TRPT1-212ENST00000542040 C6orf229H3BNL8 230 aa22.32■■□□□ 1.16
TRPT1-212ENST00000542040 DCAF8Q5TAQ9 597 aa22.32■■□□□ 1.16
TRPT1-212ENST00000542040 CIAPIN1Q6FI81 312 aa22.32■■□□□ 1.16
TRPT1-212ENST00000542040 ZNF428Q96B54 188 aa22.32■■□□□ 1.16
TRPT1-212ENST00000542040 BCL2L13Q9BXK5 485 aa22.32■■□□□ 1.16
TRPT1-212ENST00000542040 HTRA3P83110 453 aa22.31■■□□□ 1.16
TRPT1-212ENST00000542040 JMYQ8N9B5 988 aa22.31■■□□□ 1.16
TRPT1-212ENST00000542040 CEP350Q5VT06 3117 aa22.31■■□□□ 1.16
TRPT1-212ENST00000542040 ANKRD18AQ8IVF6 992 aa22.3■■□□□ 1.16
TRPT1-212ENST00000542040 CNTROBQ8N137 903 aa22.3■■□□□ 1.16
TRPT1-212ENST00000542040 CELF1Q92879 486 aaKnown RBP22.3■■□□□ 1.16
TRPT1-212ENST00000542040 CDC5LQ99459 802 aaKnown RBP22.3■■□□□ 1.16
TRPT1-212ENST00000542040 ZC3H12CQ9C0D7 883 aaKnown RBP22.3■■□□□ 1.16
TRPT1-212ENST00000542040 CDHR2Q9BYE9 1310 aa22.3■■□□□ 1.16
TRPT1-212ENST00000542040 TMEM88BA6NKF7 163 aa22.29■■□□□ 1.16
TRPT1-212ENST00000542040 POTEIP0CG38 1075 aa22.29■■□□□ 1.16
TRPT1-212ENST00000542040 POTEJP0CG39 1038 aa22.29■■□□□ 1.16
TRPT1-212ENST00000542040 FKBP5Q13451 457 aaPredicted RBP22.29■■□□□ 1.16
TRPT1-212ENST00000542040 ADARB2Q9NS39 739 aaKnown RBP22.29■■□□□ 1.16
TRPT1-212ENST00000542040 ANKIB1Q9P2G1 1089 aa22.29■■□□□ 1.16
TRPT1-212ENST00000542040 FANCIQ9NVI1 1328 aa22.29■■□□□ 1.16
TRPT1-212ENST00000542040 CXCL9Q07325 125 aa22.28■■□□□ 1.16
TRPT1-212ENST00000542040 H7C1D1 291 aa22.27■■□□□ 1.16
TRPT1-212ENST00000542040 SCNN1DP51172 638 aa22.27■■□□□ 1.16
TRPT1-212ENST00000542040 FLIIQ13045 1269 aa22.27■■□□□ 1.16
TRPT1-212ENST00000542040 GPRC5DQ9NZD1 345 aa22.27■■□□□ 1.16
TRPT1-212ENST00000542040 PODXL2Q9NZ53 605 aa22.26■■□□□ 1.15
TRPT1-212ENST00000542040 GGA1Q9UJY5 639 aa22.26■■□□□ 1.15
TRPT1-212ENST00000542040 PASKQ96RG2 1323 aa22.26■■□□□ 1.15
TRPT1-212ENST00000542040 VAMP4O75379 141 aa22.25■■□□□ 1.15
TRPT1-212ENST00000542040 RAD17O75943 681 aa22.25■■□□□ 1.15
TRPT1-212ENST00000542040 EPS15P42566 896 aa22.25■■□□□ 1.15
TRPT1-212ENST00000542040 GPSM2P81274 684 aa22.25■■□□□ 1.15
TRPT1-212ENST00000542040 EXOSC9Q06265 439 aaKnown RBP22.25■■□□□ 1.15
TRPT1-212ENST00000542040 NEURL1BA8MQ27 555 aa22.24■■□□□ 1.15
TRPT1-212ENST00000542040 RIMBP2O15034 1052 aa22.24■■□□□ 1.15
TRPT1-212ENST00000542040 ITGBL1O95965 494 aaPredicted RBP22.24■■□□□ 1.15
TRPT1-212ENST00000542040 CTSWP56202 376 aa22.24■■□□□ 1.15
TRPT1-212ENST00000542040 MAP1SQ66K74 1059 aaPredicted RBP22.24■■□□□ 1.15
TRPT1-212ENST00000542040 DNAAF4Q8WXU2 420 aa22.24■■□□□ 1.15
TRPT1-212ENST00000542040 IGKV5-2P06315 115 aa22.23■■□□□ 1.15
TRPT1-212ENST00000542040 RPS12P25398 132 aaKnown RBP22.23■■□□□ 1.15
TRPT1-212ENST00000542040 GMPSP49915 693 aaPredicted RBP22.23■■□□□ 1.15
TRPT1-212ENST00000542040 LINS1Q8NG48 757 aa22.23■■□□□ 1.15
TRPT1-212ENST00000542040 TBC1D16Q8TBP0 767 aa22.23■■□□□ 1.15
TRPT1-212ENST00000542040 ZC3H15Q8WU90 426 aaKnown RBP22.23■■□□□ 1.15
TRPT1-212ENST00000542040 SEC31BQ9NQW1 1179 aa22.23■■□□□ 1.15
TRPT1-212ENST00000542040 LAMB2P55268 1798 aa22.22■■□□□ 1.15
TRPT1-212ENST00000542040 UFL1O94874 794 aa22.22■■□□□ 1.15
TRPT1-212ENST00000542040 ATP2B4P23634 1241 aa22.22■■□□□ 1.15
TRPT1-212ENST00000542040 IGHMBP2P38935 993 aaKnown RBP22.22■■□□□ 1.15
TRPT1-212ENST00000542040 DPF2Q92785 391 aa22.22■■□□□ 1.15
TRPT1-212ENST00000542040 POLLQ9UGP5 575 aa22.22■■□□□ 1.15
TRPT1-212ENST00000542040 XDHP47989 1333 aa22.22■■□□□ 1.15
TRPT1-212ENST00000542040 DDX60Q8IY21 1712 aaKnown RBP22.21■■□□□ 1.15
TRPT1-212ENST00000542040 H7C1W4 665 aa22.21■■□□□ 1.15
TRPT1-212ENST00000542040 GCKRQ14397 625 aa22.21■■□□□ 1.15
TRPT1-212ENST00000542040 CWF19L2Q2TBE0 894 aaKnown RBP22.21■■□□□ 1.15
TRPT1-212ENST00000542040 JARID2Q92833 1246 aaPredicted RBP22.21■■□□□ 1.15
TRPT1-212ENST00000542040 CCDC85AQ96PX6 553 aaPredicted RBP22.21■■□□□ 1.15
TRPT1-212ENST00000542040 CNOT7Q9UIV1 285 aaKnown RBP22.21■■□□□ 1.15
TRPT1-212ENST00000542040 ECE2O60344 883 aa22.2■■□□□ 1.14
TRPT1-212ENST00000542040 G2E3Q7L622 706 aa22.2■■□□□ 1.14
TRPT1-212ENST00000542040 UBE3BQ7Z3V4 1068 aa22.2■■□□□ 1.14
TRPT1-212ENST00000542040 TTLL11Q8NHH1 800 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms